Oxyura jamaicensis (ruddy duck): 118178351
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Entry
118178351 CDS
T11549
Symbol
SMPD2
Name
(RefSeq) sphingomyelin phosphodiesterase 2
KO
K12351
sphingomyelin phosphodiesterase 2 [EC:
3.1.4.12
]
Organism
oja Oxyura jamaicensis (ruddy duck)
Pathway
oja00600
Sphingolipid metabolism
oja01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oja00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
118178351 (SMPD2)
Enzymes [BR:
oja01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
118178351 (SMPD2)
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
118178351
NCBI-ProteinID:
XP_035202677
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All DBs
Position
26:complement(join(1558479..1558822,1559027..1559183,1559263..1559367,1559462..1559594,1559702..1559784,1560057..1560146,1560230..1560323,1560558..1560634,1560722..1560818,1561283..1561332))
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AA seq
409 aa
AA seq
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MEGDPKLRLRVFDLNCWAIRYLSKRRQERIRLIGDRLCREGFDLVLLQEVWSERDYSDLK
AKLGACCPFSHYFRSGVIGSGLCIFSKFPILDTLLYQYSLNGYPYMLQHGDWFCGKSVGL
AVVKISGIVFNVYVTHLHAEYCREKDAYLPHRVVQAWELLQFIRHTSQAADVVLLGGDLN
MHPQDVGIRLLRCWTGLQDAFTETKHFEGCEDGCTLVPNNRFTVKSELQPFPLGIRIDYI
LYKAGSGFTVKCEELQTTTGTAPGADIPYSDHEAVMATLHVQRTGQAAGVTPGTAVPALV
EVLSEARTEVRVGLLAARRQRYSSGRMALLALLLLLLQAAAALGALAGLADGQPFPKLSF
ALLAFLALGVLLLATGLHLFHTIEVKMLQGTEEQMRMALEVLQERPGRS
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggagggggaccccaagctgcggctccgcgtcttcgacctcaactgctgggccatccgc
tacctgagcaagcggcgccaggagcgcatccggctcatcggggacaggctgtgccgggag
ggctttgacctggtgctgctgcaggaggtatggagcgagcgggactacagcgacctgaag
gcgaagctgggagcctgctgccccttctcccattatttccgcagcggtgtcatcggcagc
gggctctgcatcttctccaagttccccatcctggacacgctgctctaccagtactcgctc
aacggttacccctacatgctccagcacggggactggttctgtggcaagtcggtggggctc
gccgtcgttaagatctccgggatcgtcttcaacgtctacgtcacccacctgcacgccgag
tactgccgggagaaggacgcctacctgccgcaccgcgtggtgcaagcctgggagctgctg
caattcatccgacacacgtcgcaggcggccgacgtggtgctgctgggaggggacctgaac
atgcacccccaagacgtgggcatccggctgctgcgctgctggacggggctgcaggatgcc
ttcaccgagaccaagcacttcgagggctgcgaggacggctgcaccctggtccccaacaac
cgcttcaccgtcaagtcggagctgcagcccttcccgctgggcatccgcatcgactacatc
ctctacaaggctggctccggcttcacggtgaagtgcgaggagctgcagaccaccacgggg
acggccccaggcgcggacatcccctactcggaccacgaggccgtgatggcaacgctgcac
gtccagaggacggggcaggcagcgggtgtcacccccggcacggccgtgccggcgctggtg
gaggtgttgagcgaggcgcggaccgaggtgcgcgtggggctgctggcggcgcggcggcag
cgctactcctcgggcaggatggccctgctggccctgctgctgctgctgctgcaagccgcg
gccgcgctgggcgccctggcggggctggcggacgggcagcccttccccaagctttccttc
gccctgctggccttcctcgccctcggcgtcctcctcctcgccaccggcctccacctcttc
cacaccatcgaggtgaagatgctgcagggcaccgaggagcagatgaggatggcgctggag
gtgctgcaggagcgccccggccgctcctga
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