Oxyura jamaicensis (ruddy duck): 118178430
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Entry
118178430 CDS
T11549
Symbol
USP49
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 49 isoform X1
KO
K11834
ubiquitin carboxyl-terminal hydrolase 44/49 [EC:
3.4.19.12
]
Organism
oja Oxyura jamaicensis (ruddy duck)
Brite
KEGG Orthology (KO) [BR:
oja00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oja01002
]
118178430 (USP49)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oja04121
]
118178430 (USP49)
Enzymes [BR:
oja01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
118178430 (USP49)
Peptidases and inhibitors [BR:
oja01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
118178430 (USP49)
Ubiquitin system [BR:
oja04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
118178430 (USP49)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
DUF8414
PB1-like
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
118178430
NCBI-ProteinID:
XP_035202858
LinkDB
All DBs
Position
26:complement(join(3233088..3233278,3234044..3234249,3234982..3235090,3236689..3236893,3238680..3240062))
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AA seq
697 aa
AA seq
DB search
MDRCKHVGRLRLAQDHSILNPQKWHCMDCQTTESIWACLKCSHVACGRYIEEHALKHFEE
TRHPLAMEVNDLYVFCYLCEDYVLNDNPEGDLKLLRSSLSAIKSQKHDPSTRSGRTLRSM
ALGEDMCNHQRTLQGQSQMLTALWHRRQSLLTKALRTWFDKSSRGQLKLQQKKQMEELER
KKEAARQRRQEMKRQLLEELANTPPRKSARLLSHVHRENLIPRKFREVATASPTSRQMQS
SRFNQFYSIRRKPLMTPGVTGLRNLGNTCYMNSILQVLSHLQKFRECFLTLDLCETEELL
AKTVNGKSRMPGKLANGSAANESGKTDKVGSYGTQSLPAGLNGGSSISRSLELIQPKEPS
SKHISLCHELHTLFRVMWSGKWALVSPFAMLHSVWSLIPAFRGYDQQDAQEFLCELLDKV
QQELESEGTKRRILIPFSQRKLTKQVLKVVNTIFHGQLLSQVTCITCNYKSNTVEPFWDL
SLEFPERYHSIEKGIVPVNQTECMLTEMLAKFTETEALEGRIYACDQCNSKRRKSSPKPL
VLSEAKKQLMIYRLPQVLRLHLKRFRWSERNHREKIGVHVLFDQVLNMEPYCCRDSLSSL
DKETFVYDLSAVVMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSKLNVCSVEEVCKTQAYI
LFYTQRTVQDKARISEKQLQAQVLSKNSDKDRRLTFP
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggatagatgcaaacatgttgggcggctacgactcgcccaggaccattctatcctgaac
ccgcagaagtggcactgcatggactgccagacaaccgaatctatctgggcttgtctgaag
tgctcccatgtagcctgtgggaggtacatcgaggagcatgcacttaaacactttgaagaa
accagacatccgttggcaatggaagttaacgatctgtatgtattttgttacctttgtgaa
gattatgtcttgaatgataaccccgagggtgatttgaaactgctaagaagttctctgtca
gcgattaaaagtcaaaaacatgatccgtcgacaagaagtggcaggactttgcgatccatg
gctttgggagaggacatgtgcaaccatcaaaggacccttcagggacagtctcagatgctt
acagctctctggcacaggcgccaatccttgcttacaaaggcgctgcggacttggtttgat
aagagctccagaggccagctgaaattacaacagaagaaacaaatggaggagttggagagg
aagaaggaggcagcgaggcagcggcggcaggagatgaagagacagcttctggaggagctg
gcaaacactcctccaaggaagagcgcgaggctgttgtcccatgtgcacagagagaacttg
attccaaggaaattcagggaggtggcgaccgcttcccctacctcaaggcagatgcagagc
agcaggttcaatcagttttattccatccggcgtaagcctctgatgactcccggggtcacg
ggtctaaggaacctgggcaacacatgttacatgaattctattctgcaagtgctaagtcac
ctccagaaatttcgagaatgttttttgacgcttgatctctgtgaaacagaagaactctta
gccaaaactgtgaatgggaagtctaggatgcctggcaaattggcaaatggatccgctgct
aacgagtcagggaagactgacaaagtgggatcgtatggcacgcagagcttgccagctggc
ttaaatggtggctcctcgataagcaggagtttagaactgatacaacccaaggaaccaagt
tcaaagcacatctccctctgtcacgaattgcacaccctcttcagagtgatgtggtctggc
aagtgggcgctcgtgtccccgtttgccatgctgcactctgtgtggagcctgatcccagcg
tttcggggctacgatcagcaggacgctcaggaatttctatgcgagttgttggacaaagta
cagcaggagctggagtcggaaggcacgaagcgcaggatcctcatccctttctctcagagg
aagctcaccaagcaggtcctgaaggtggtgaacaccatttttcacgggcagttgctcagt
caggtcacctgcataacgtgcaactacaaatccaacactgttgagcccttttgggatctt
tccctggaatttcccgagcgctatcactccattgagaaagggatcgtccccgttaaccag
acggagtgcatgctgacagaaatgttggccaagttcacagagactgaagctctagaaggg
aggatatatgcatgcgaccaatgcaacagcaaacggcgaaagtcttctcctaaacctctt
gttctgagtgaagctaaaaagcagttaatgatctacaggctacctcaggtcctccggctg
caccttaaacgattcaggtggtctgaacgcaatcaccgtgagaagattggggtccatgtc
ctctttgaccaggtactaaacatggaaccttactgctgcagggactctctctcctctctt
gacaaagagacctttgtctatgacctctccgctgtggtgatgcatcatggtaaagggttt
ggctcaggacactacacagcatattgctacaacacggagggaggtttttgggtccactgc
aatgactccaaactgaatgtatgtagcgtggaggaggtgtgcaaaacccaggcctacatt
ctcttttacactcaaagaacagtgcaggacaaagcaagaatctcagaaaaacaactccaa
gctcaggtgctgtccaaaaatagtgataaagacagaagactgacattcccatga
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