KEGG   Oxyura jamaicensis (ruddy duck): 118178551
Entry
118178551         CDS       T11549                                 
Symbol
PPFIA4
Name
(RefSeq) LOW QUALITY PROTEIN: liprin-alpha-4
  KO
K26226  liprin-alpha
Organism
oja  Oxyura jamaicensis (ruddy duck)
Pathway
oja04517  IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:oja00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    118178551 (PPFIA4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oja04131]
    118178551 (PPFIA4)
Membrane trafficking [BR:oja04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    118178551 (PPFIA4)
SSDB
Motif
Pfam: LIP-1 SAM_1 SAM_2
Other DBs
NCBI-GeneID: 118178551
NCBI-ProteinID: XP_035203042
LinkDB
Position
26:join(2809252..2809299,2809301..2809489,2816689..2816790,2816915..2817079,2817668..2817742,2818864..2818959,2819363..2819584,2820008..2820154,2820266..2820400,2820993..2821076,2821934..2822065,2823480..2823542,2824854..2824945,2827268..2827409,2827663..2827868,2828345..2828585,2828758..2828793,2829372..2829505,2829660..2829823,2830385..2830478,2830723..2830804,2831434..2831634,2832593..2832655,2833795..2833821,2834743..2834918,2835519..2835616,2836281..2836456,2836677..2836745,2837528..2837705,2838565..2838623)
AA seq 1231 aa
MMCEVMPTISEGDPLGPPQGSEADADFEQLMVNMLDERDKLLDTLRETRETLSVTQSRLQ
EALRERDQLQRQLNSALPQEFATLTRELSACREQLLEREEEISELKAERNNTRLLLEHLE
CLVSRHERSLRMTVVKRQAQSPSGVSSEVEVLKALKSLFEHHKALDEKVRERLRASLERV
ATLEEQLVDAHRQVAALQQGATREAPAGERDEREPKEPAQKLPWKRLSNGSVHPDDEAGR
VVELQELLEKQNFEVVQAKERISALAASVAELEEDLGTARKDLIKSEEMSSKYQRDLREA
LAQKEDMEERITTLEKRYLAAQREATSIHDLNDKLESELANKESLHRQCEEKARHLQELL
ELAEQKLQQTMRKAETLPEVEAELAQRIAALTKAEERHGSIEEHLRQLESQLEEKNQELA
RARQREKMNEEHNKRLSDTVDRLLSESNERLQLHLKERMAALEEKNTLLQELENTQKQIE
EHQHDKRRLSDEIDKLRLEVDQLKTRSGTFVESVHTRSHMGSATDLRFPLSAVVHAPAEP
FGTAPGLPRAQKGRFAARREEPAKDWEQAQAGSVLATGPHAFDSDPEISDVDEDDRETLF
SSMDVLSPGGHSDAQTLAMMLQEQLDAINEEIRMIQEEKESTELRAEELETRVTSGSMEG
LNLTQLCKRASIPTSLTALSLASSSPPLSGRSTPKLTSRSAAQDLDRMGIMTLPSDLRKH
RRKLLSPAARDESREDKTTIKCETSPPSSPRTLRLEKLGHPALSQEEGKSSLEEQASNPS
SNSSQDSLHKGSKRKGIKSSIGRLFGKKEKGRLIQLSREGATGQVLLTDTEVGIQDPLGL
GKLGAQAEKDRRLRKKHELLEEARRKGLPFAHWDGPTVVSWLELWVGMPAWYVAACRANV
KSGAIMSALSDTEIQREIGISNALHRLKLRLAIQEMVSLTSPSAPPTSRTSSGNVWVTHE
EMENMATSTKTDTEEGSWAQTLAYGDMNHEWIGNEWLPSLGLPQYRSYFMECLVDARMLD
HLTKKDLRVHLKMVDSFHRTSLQYGIMCLKRLNYDRKELERRREETQHEIKDVLVWTNDQ
VIHWIQSIGLREYANNLVESGVHGALLALDENFDHNSLALVLQIPTQNTQARQVLEREFN
NLLALGTDRRLDDGDDKTFRRTPSWRKRFRPRDVHSINMLSGSAETLPAGFRVTSLVPLP
PPSAPAKKMPPEVGASGSPRLETSTVRTYSC
NT seq 3696 nt   +upstreamnt  +downstreamnt
atgatgtgcgaggtgatgcccaccatcagcgagggggaccccctgggccccccgcagggc
tccgaggcggatgccgacttcgagcagctgatggtgaacatgctggacgagagggacaag
ctgctggacaccctgcgggagacccgcgagacgctctccgtcacccagagccgcttgcag
gaggccctccgggagcgcgaccagctccagaggcagctcaactctgccctcccgcaggag
tttgccacgctgacgcgggagctcagcgcgtgccgagagcagctcctggagagggaagag
gagatctcagagctgaaagctgagcgcaacaacacccggctcttgctggagcacctggag
tgcctggtgtcgaggcatgagcggtccctgaggatgaccgtggtcaagcgtcaggcccag
tcgccgtctggggtttccagtgaggtcgaggtgctcaaggcactcaagtcactctttgag
catcacaaggcgctagatgaaaaggtcagggagcgcctgcgagcgtccttagagcgagtg
gcgaccttagaggagcagctggtggatgcccaccggcaggtggcagctctgcagcaaggc
gccacgcgggaagccccagcaggcgagcgggatgagagggagcccaaggagccagcgcag
aagcttccctggaagcggctctccaacggctctgttcaccccgacgatgaggcaggccgg
gtggtggagctgcaggagctcctggagaagcagaatttcgaagtggtccaagccaaggag
cgcatctccgcactggctgccagcgtcgcggagctggaggaggatctgggcactgccagg
aaggatctgatcaaatcagaagagatgagcagcaagtaccagcgggacctccgagaggct
ctggctcagaaggaggacatggaagagaggatcaccacgctggagaaacgctacctagca
gcccagcgagaagccacctccatccacgacctcaatgacaagctggaaagcgaattggcc
aacaaggagtccctgcaccgccagtgtgaggagaaagcccggcacctgcaggagctgctg
gagctggcggagcagaagctgcagcagacgatgcggaaagcggagacgctgcccgaggtg
gaagcggagctggcccagcgcatcgcagcgctcaccaaggcagaagagaggcatgggagc
atcgaggagcacctccggcagctggagagccagctggaagagaagaaccaggagctggcc
agggcccgccagcgggagaagatgaacgaggagcacaacaagcggctctcggacaccgtg
gaccggctgctgagcgagtctaatgagcggctgcagctgcacctcaaggagaggatggca
gccttggaggagaagaacacattgttacaagagctggaaaacacccaaaagcagatagag
gaacaccagcacgacaagcgacggctgtcagacgagatcgacaaactgcggctggaggtc
gatcagctcaagaccagaagcgggacattcgtggagagcgtgcacacgaggtcccacatg
ggcagtgccacagacctgcgcttcccgctgagcgccgtggtccatgcccccgccgagccc
tttgggacggccccaggcctgcctcgggcgcagaaagggcgattcgccgcccggcgagag
gagccagccaaggactgggagcaggcccaggcaggcagcgtcctggccacagggcctcac
gccttcgacagtgaccctgagatctccgacgtggatgaggatgaccgcgagacgctcttc
agctccatggacgtgctctcccctggcgggcactcggacgctcagaccttggccatgatg
ctccaggagcagctggatgccatcaatgaggagatcaggatgatccaagaggagaaggag
tccaccgagctccgtgcggaggagctggagacccgcgtgacgagcggcagcatggagggc
ctcaacctcacccagctgtgcaagagggcctccatccccacctcgctgacggccctgtcc
ctggccagctcgtccccgccgctcagtggccgctccacccccaagctgacctcccgcagc
gccgctcaggacctcgaccgcatggggatcatgacgctgcccagtgacttgaggaagcac
cggaggaaactgctatcacccgcagctcgggatgaaagccgagaggataaaaccaccatc
aaatgtgagacttcccccccgtcctcacccaggacgttgcggctggagaagctgggtcac
cctgcgctgagtcaggaggaagggaagagctccctggaagagcaggccagcaaccccagc
agcaacagcagccaggactccttgcacaagggctccaagaggaaggggatcaaatcttcc
atcgggcgcttgtttgggaaaaaagagaagggccgcttgattcagctgagcagagaaggg
gccacagggcaggtgctgctgaccgacacagaggtgggcatccaggaccctctgggcctc
ggcaagctgggtgctcaggctgagaaggatcgtcgcctgcggaaaaagcacgaactcctg
gaagaggctcggaggaaaggattgccctttgcccactgggatggccccaccgttgtctcc
tggctggagctctgggtgggaatgccagcctggtacgtcgctgcttgccgagccaacgtg
aagagtggagccatcatgtcagccttgtccgacaccgagatccagagggagatcggcatc
agcaacgcgctgcatcgcctgaagctgcgcctggccatccaggagatggtttcgctcacg
agcccctcggcaccacccacctcacggacatcctctggaaacgtctgggtcacccacgag
gagatggagaacatggcaacgtccaccaagacggacacagaggaaggcagctgggcacag
acactggcctatggggacatgaaccatgagtggattgggaacgagtggctgcccagcctg
ggcctcccgcagtatcgcagctacttcatggagtgtctcgtcgatgcacggatgctggac
cacctcaccaagaaagatctcagagtgcacctgaagatggtggacagcttccaccgcacc
agcctgcagtacggcatcatgtgcctgaagaggctcaactacgaccgcaaagagctcgag
aggaggcgagaagagacccagcatgaaatcaaagacgtgctggtgtggaccaacgaccag
gtcatccactggatccagtccatcgggcttcgcgagtacgcgaacaacctcgttgagagc
ggggtgcatggggcgctcctggccctcgacgaaaacttcgaccacaacagtctggcactt
gtcttgcaaatccccacgcagaacacgcaggctcgacaagtgctggagagggagttcaac
aatctgcttgcattgggcacggatcgaaggttggatgatggcgatgacaaaaccttccgt
cgaaccccgtcctggcgaaagcgcttccgcccacgagatgtccacagcatcaacatgctc
agtggctcggccgagacgctgcccgccggcttccgtgtcaccagcctggtgcccctgcca
cccccatccgcccctgccaagaaaatgcccccagaagttggtgcctctgggtcgccacgg
ctggagacctccacggtccggacatactcctgctga

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