KEGG   Oxyura jamaicensis (ruddy duck): 118178674
Entry
118178674         CDS       T11549                                 
Symbol
TRIM33
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM33
  KO
K08883  tripartite motif-containing protein 33 [EC:2.3.2.27]
Organism
oja  Oxyura jamaicensis (ruddy duck)
Brite
KEGG Orthology (KO) [BR:oja00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:oja01001]
    118178674 (TRIM33)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:oja04121]
    118178674 (TRIM33)
Enzymes [BR:oja01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     118178674 (TRIM33)
Protein kinases [BR:oja01001]
 Serine/threonine kinases: Other
  TIF1 family [OT]
   118178674 (TRIM33)
Ubiquitin system [BR:oja04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    118178674 (TRIM33)
SSDB
Motif
Pfam: Bromodomain zf-B_box ANCHR-like_BBOX PHD zf-B_box_Trim66 zf-RING_5 zf-RING_UBOX PHD-1st_NSD zf-RING_2 zf-C3HC4 zf-C3HC4_2
Other DBs
NCBI-GeneID: 118178674
NCBI-ProteinID: XP_035203286
LinkDB
Position
26:complement(join(6387912..6388124,6388207..6388257,6389894..6390046,6390648..6390722,6391671..6391794,6392334..6392680,6393773..6393932,6394234..6394297,6395292..6395424,6397239..6397439,6398288..6398452,6398692..6398936,6400970..6401087,6401602..6401748,6402934..6403048,6405692..6405808,6408413..6408545,6411230..6411377,6411501..6411619,6423876..>6424158))
AA seq 1036 aa
AERALGEAEAEAAAGPGAVPGPGPSPVPPLTPAAPGPFSLLDTCAVCAQSLQSRREAEPK
LLPCLHSFCRRCLPEPERQLSVPVPGGANGDVQQVGVIRCPICRQECRQIDLVDNYFVKD
TSETPSSSDEKSEQVCTSCEDNASAVGFCVECGEWLCKTCIEAHQRVKFTKDHMIRKKED
VSSEAVGASGQRPVFCPVHKQEQLKLFCETCDRLTCRDCQLLEHKEHRYQFLEEAFQNQK
GAIENLLAKLLEKKNYVNFAATQVQNRIKEVNETNKRVEQEIKVAIFTLINEINKKGKSL
LQHLENVTKERQMKLIQQQNDITGLSRQVKHVMNFTNWAIASGSSTALLYSKRLITFQLR
HILKARCDPVPAANGAIRFHCDPTFWAKNVVNLGNLVIENKPTPSYTPNVVVGQAPPGTN
HVSKTPGQINLAQLRLQHMQQQVYAQKHQQLQQMRMGQPSGSVPRQTGPQILQQQPPRLI
SMQTMQRGNMNCGAFQAHQMRMAQNAARIPGIPRHNGPQYSMMQPHLQRQHSNPGHAGPF
PVVSVHNTTINPTSPTTATMASANRGPTSPSVTAIELIPSVTNPENLPSLPDIPPIQLED
AGSSSLDNLLSRYITGSHLPPQPTSTMNPSPGPSALSPGSSGLSNSHTPVRPPSTSSTGS
RGSCGSSGRTAEKTSVNFKSDQVKVKQEPGTEEEICSFSGTVKQEKTEDGRRSACMLSSP
ESSLTPPLSTNLHLESELEALGSLENHVKTEPGDLSESCKQSGHSLLNGKSPVRTLMHRS
ARIGGEGNNKDDDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGEWICTFC
RDLSKPEVEYDCDNSQHSKKGKTAQGLSPVDQRKCERLLLYLYCHELSIEFQEPVPASIP
NYYKIIKKPMDLSTVKKKLQKKHSQHYQTPEDFVADVRLIFKNCERFNEMMKVVQVYAET
QEINLKADSEVAQAGKAVALYFEDKLTEIYPDRTFQPLPEFEQEEDDGEITEDSDEDFIQ
PRRKRLKSDERPVHIK
NT seq 3111 nt   +upstreamnt  +downstreamnt
gcggagcgcgctctcggggaggccgaggccgaggcggcggcggggcccggtgcggttccg
ggcccgggccctagccccgtgcccccgttgacgccggcggcgcctgggcccttctcgctg
ctggacacctgcgccgtgtgcgcgcagagcctgcagagccggcgcgaagccgagcccaag
ctgctgccctgcctgcactccttctgccggcgctgcctgcccgagcccgagcggcagctc
agcgtgcccgtgcccggcggcgccaacggcgacgtccagcaagttggtgtaatcagatgt
ccgatatgccgccaagaatgcagacagatagatctggtggataactactttgtaaaagac
acatcagaaacaccgagcagctctgatgagaaatcagaacaggtgtgcaccagctgtgaa
gataatgctagtgctgtagggttttgtgtagaatgtggggaatggttgtgcaagacctgc
atagaagctcatcagcgagtaaaatttactaaagatcacatgatcagaaaaaaagaggat
gtatcttcagaggccgtgggagcatctggtcaacgtcctgttttctgtcctgtccacaaa
caagagcagttaaaacttttctgtgaaacatgtgataggctgacatgcagagactgtcag
ttactggaacacaaagaacacaggtatcagtttctagaagaagctttccagaaccagaag
ggtgcaatcgagaatctgttggccaaacttcttgagaagaagaattacgtaaattttgca
gctacccaagttcagaacaggataaaagaagtaaatgaaactaacaaacgagtagaacag
gaaatcaaagtggccatattcacactcatcaatgaaatcaataaaaagggaaaatctctc
ttacagcaccttgagaatgtaacaaaggagagacaaatgaagttaatacaacaacagaat
gacatcaccggtctttcgcgacaagtgaagcatgtgatgaactttactaattgggctatt
gcaagtggcagcagtactgctttactgtacagtaaacgactgataacattccagttacgt
catattttaaaggcacgttgcgatcctgtcccagctgccaatggagcaatacggttccat
tgtgaccctacattctgggcaaagaatgtcgtcaatttaggtaaccttgttattgaaaat
aaaccaactcctagttacactcccaatgtagtggttggacaagctcctccaggaacaaac
catgtcagcaaaactccaggacaaatcaatctagcacagcttcgacttcagcatatgcag
caacaggtgtatgcacaaaaacatcagcaactgcagcagatgaggatgggacagccatct
gggtcagttcccagacagacaggtcctcaaatcttacagcagcagcctcccaggttgatc
agcatgcagaccatgcagaggggtaacatgaactgtggggctttccaagcacatcagatg
agaatggctcagaatgctgctcgtataccaggaataccacgccacaatggaccacaatac
tccatgatgcaacctcaccttcaaagacaacattctaaccctggacatgcggggcctttt
ccagttgtttctgtgcacaacaccactattaatccaactagtcccactactgcaacaatg
gcaagcgcaaaccgtggtccaacaagtccgtctgttacagcaattgaactcattccttct
gtaacaaatccggagaatttaccttccctgccagatatcccacccatccagcttgaagat
gctggttcaagtagtttggataaccttttaagtagatatatcacaggcagccacctaccc
ccgcaacctacaagtacaatgaatccctccccagggccttcagctctatctccagggtca
tcaggcttatccaactcccacactcctgtgaggccacctagtacctccagcacaggtagc
agaggaagctgtggctcctcgggcagaacagctgagaaaactagtgttaacttcaagtct
gaccaagtgaaagtcaagcaagaaccagggacagaggaagagatatgcagtttctcaggc
acagtgaaacaggagaaaacggaggatggcagaaggagtgcttgcatgcttagcagtcct
gagagcagcttgacaccaccactatccactaacttgcatctggagagtgaattggaagca
ttaggaagtctagaaaaccatgtgaaaactgagccaggagatttaagtgaaagctgcaag
cagtctggacatagccttctaaatggaaaatccccagtgcggactctaatgcatcgatca
gctagaattggaggagaaggcaataataaagatgatgatccaaatgaagactggtgtgca
gtatgccaaaatggaggggatctattatgttgtgaaaagtgccccaaagtgtttcatcta
acttgtcatgtaccaacactcctcagttttccaagtggagagtggatatgtacattctgc
agagatctaagcaaaccagaagtagaatatgattgtgacaattcacaacacagcaagaaa
gggaaaacagcacaaggcctgagtcctgtggaccaaaggaaatgtgaacgtcttctgctt
tacctgtattgtcatgagctgagcattgaatttcaagagccagtcccagcctcgatacca
aactactataaaattataaagaaaccaatggatttatctacagttaaaaagaaactgcaa
aagaagcattcccaacattaccagactcctgaggattttgtggcagatgtccggttgatc
ttcaagaactgtgaaaggtttaatgaaatgatgaaagttgttcaagtttatgcagaaaca
caagagattaatttgaaggctgattcagaagtagcacaggcagggaaggcagttgcatta
tactttgaagataaacttacagagatctacccagacaggaccttccagcctttgcctgaa
tttgagcaggaagaggatgatggtgaaataactgaggactccgatgaagattttatacaa
ccacgtagaaaacgcctaaaatcagatgagagaccagtgcatataaagtaa

DBGET integrated database retrieval system