Oxyura jamaicensis (ruddy duck): 118179035
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Entry
118179035 CDS
T11549
Symbol
USE1
Name
(RefSeq) vesicle transport protein USE1
KO
K08507
unconventional SNARE in the endoplasmic reticulum protein 1
Organism
oja Oxyura jamaicensis (ruddy duck)
Pathway
oja04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
oja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
118179035 (USE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oja04131
]
118179035 (USE1)
Membrane trafficking [BR:
oja04131
]
SNARE
SNAP-25[C] (Qc)
Use1
118179035 (USE1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Use1
MamF_MmsF
DUF7610
Bestrophin-like
EssA
MCU
Activator-TraM
AAR2
Peptidase_M56
YjcZ
DUF8076
NEDD4_Bsd2
Synaptonemal_3
AtcC_N
Prominin
Orf78
bpX0
Motif
Other DBs
NCBI-GeneID:
118179035
NCBI-ProteinID:
XP_035203940
LinkDB
All DBs
Position
28:complement(join(1978671..1978853,1979346..1979508,1979753..1979783,1980655..1980673,1980916..1981068,1981568..1981646,1982159..1982208,1982447..1982548))
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AA seq
259 aa
AA seq
DB search
MAATRLELNLMRLLSRCEALAAERRDPEEWRLEKYVAALEDMLRELKKQSSKPAPELLNE
YSRKVDFLKGLLEAEKLSSSTEKALANQFLAPGRTPTTTKERTPATKTVHLQTKARCTGK
MRSELLGTDPLAISDSEELNIRKRKGLASDEKQSAVELDAVLQHHQDMQEKLAEEMLSLA
RSLKNNTLAAQNVIKQDNQTLSHSLRMADQNFEKLKDESDRLEQHAKKSVNWLLWIMLIV
VCFIFISMILFIRIFPKLK
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgacgcggctggagctgaacctgatgcggctcttgagccgctgcgaggcgctg
gcggcggagcggcgagaccccgaggagtggcggctggagaagtatgtggctgctcttgaa
gacatgctccgagagctgaagaagcagtccagtaagcctgccccagaactgctgaatgaa
tactcccgaaaagtggactttctaaagggacttttagaagctgaaaaattgagttcatca
actgaaaaggcactggcaaatcagttcttggcccctggacgtacacctaccacaaccaaa
gagagaaccccagctaccaaaacagttcatctgcagacaaaagctcgttgcacaggcaag
atgaggagtgagctgcttggtacagatcccttggctatcagtgattctgaggagttgaac
atacggaagcggaaaggccttgcgtctgacgagaagcagtcagcagttgagctggatgct
gtgttacagcaccaccaggacatgcaggagaagctagctgaagaaatgctaagtttggct
cgcagtctcaaaaacaacactctggctgcgcagaacgtgataaaacaagataaccagaca
ctatcccattctctgaggatggcagaccagaactttgagaagctcaaggatgaatctgac
cgccttgaacagcatgcaaagaaatcagtcaactggctgttatggataatgttaattgta
gtttgttttatattcatcagcatgattctctttatcagaattttcccaaaactaaaatga
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