Oxyura jamaicensis (ruddy duck): 118179125
Help
Entry
118179125 CDS
T11549
Symbol
MED16
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 16 isoform X1
KO
K15159
mediator of RNA polymerase II transcription subunit 16
Organism
oja
Oxyura jamaicensis (ruddy duck)
Brite
KEGG Orthology (KO) [BR:
oja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oja03021
]
118179125 (MED16)
Transcription machinery [BR:
oja03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Tail
118179125 (MED16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med16_bridge
Med16_N
Med16_C
WD40
Beta-prop_IFT140_1st
Beta-prop_WDR3_1st
ANAPC4_WD40
WD40_WDHD1_1st
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
WD40_Prp19
DSE1_N
Beta-prop_WDR5
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_HPS5
Beta-prop_EML
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
118179125
NCBI-ProteinID:
XP_035204107
LinkDB
All DBs
Position
28:complement(458910..467810)
Genome browser
AA seq
830 aa
AA seq
DB search
MDLAYVCEWERRPKSNHCPSIPLVCAWSCRNLIAFTTDLRNEEEKDLTHMVHIIDTEHPW
DVYSVNSGHAEVITCLEWDQSGSRLLSADADGHIKCWSMTDHLANSWENTVGSMVEGDPV
VALSWLHNGVKLALHVEKSGASNFGEKFSRVKFSPSLTLFGGKPMEGWIAVTISGLVTVS
LLKPNGQVLTSTESLCRLRCRVALADVAFTGGGNIVVATSDGSSTSPVQFYKVCVSVVNE
KCKIDTEILPSLFMRCTTDPARKDKYPAITHLKFLARDMSEQVLLCASNQNSSIVECWSL
RKEGLPVNNIFQQISPVVGDKQPMILKWRILSATNDLDRVSAVALPKLPISLTNTDLKVA
NDTKFFPGLGLALAFHDGSVHIVHRLSLQMMAVFYGSSSQRPVDEQTIKRQRTAGPLVHF
KAMQLSWTSLALAGIDSHGKLSMLRISPSMGHVLDMNTSLRHLLFLLEYCMVTGYDWWDI
LLHVQPNMVQNLVEKLHEEYMRQSAALQQVLSTRIVAMKASLCKLSSSTLARVCDYHAKL
FLIAISCTLKSLLRPHFLNTPDKSPGDRLTEICSKITDIDIDKVMINLKTEEFVLEMTTL
QSLQQLIQWVGDFVLYLLASLPNQGSPVRPGHSFLRDGASLGMFRELMVVIRIWGLLKPS
CLPVYTATSDTQDSMSLLFRLLTKLWLCCREENHITEPDDTLIDECCLLPSQLLIPNIDW
LPINDGIISKLQNKQLVRLQFGKAPGLVGHTVSSQFDAFVRAPGQPKIDHLRRLHLGAYP
TEECKSCTRCGCVTMLKSPNKVTAVKQWEQRWIKNCLCGGLWRRMPLSYS
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atggacctggcctacgtgtgcgagtgggagcggcggccgaagagcaaccactgcccgtcc
atcccgctggtgtgcgcctggtcctgccgcaacctcatcgccttcaccaccgacctccgc
aacgaggaggagaaggacctcacccacatggtgcacatcatcgacaccgagcacccctgg
gacgtctactccgtcaactccgggcacgccgaggtcatcacctgcctggagtgggaccag
tccggctccaggctgctctcagcagacgcagacggccacatcaagtgctggagcatgacc
gaccacctggccaacagctgggagaacacagtgggcagcatggtggagggagaccccgtc
gtggccctgtcctggctgcacaacggcgtgaagctggctctgcacgtggaaaagtccggg
gcatccaacttcggcgagaagttttccagggtgaagttctcgccgtcgctgacgctgttc
ggtgggaagccgatggagggctggatcgccgtcaccatcagcggcctggtcaccgtctcc
ctcctcaagcccaacgggcaggtgctgacgtccacggagagcctgtgccgcctgcgctgc
cgcgttgccctggcggatgttgccttcactggcggggggaacatcgtggtggccacgtcg
gacggcagcagcacctcccctgtccagttctacaaagtctgcgtcagcgtggtgaacgag
aagtgcaagatagacaccgaaatcctgccttccctcttcatgcgctgcaccacggaccct
gcccgcaaggacaagtacccagccatcacccacctgaaattcctggctcgggacatgtca
gagcaggtgttgctctgtgcttccaaccagaacagcagcatcgtggagtgctggtctctc
cggaaagagggcttgcctgtcaataacatcttccagcaaatctctcctgtggtcggagac
aagcagcccatgatactgaagtggcgaattctttctgccaccaatgacttggatcgggtt
tcagctgtggctctgccgaagttgcccatctccctgaccaacacggacctgaaggtagcg
aacgacaccaaattcttccctggattgggtctggctttggcttttcacgacggcagcgtc
cacattgttcatcggctctccttgcaaatgatggctgtcttctatggctcctcgtcccag
cgccccgtggacgagcagactatcaaacggcagcgaactgctggtcccttggttcacttc
aaagccatgcagctgtcctggacatctctggccttggctggcattgatagtcacgggaag
ctgagcatgcttcgtatctccccttccatgggccacgtgctggacatgaacacgtccctg
cgtcacttgctgttcctgttggagtactgcatggtgactggctatgactggtgggacatc
ctgctccacgtccaacccaacatggtgcagaacctggtggagaagctgcacgaagagtac
atgcgccagagcgcggccctgcagcaggtcctctccactcgcattgttgccatgaaggca
tctctttgcaagctctcctccagcacgttagcgcgtgtgtgtgactaccatgccaagctg
ttcctcattgccatcagctgcaccttgaagtcgctgctgcgcccgcacttcctcaacacc
ccggacaagagccctggggaccgactcacagagatctgctccaagatcacagatatagac
attgacaaggtgatgatcaacctgaagacagaagagtttgtcctggagatgaccacgttg
cagtccctgcagcagctcattcagtgggtgggagactttgtgctctacctgctggccagc
ctgcctaaccagggctctcctgtgcggccgggccacagctttctgcgagacggagcgtcc
ttgggcatgttcagggagctgatggtggtgatccgtatctgggggctgttgaagccaagc
tgcctccccgtctacacagcaacctctgacacccaggacagcatgtccctcctcttcagg
cttctaacgaaactctggctgtgctgtcgtgaggaaaatcacataacggagccagatgat
accctgatagatgaatgctgcctcctgcccagccagttgctcattcccaatattgattgg
ctgcctatcaacgatggcattatcagcaagctgcagaacaaacagcttgtccggctgcag
tttggaaaagctcctgggctcgttggtcacactgtttcttcccagttcgatgcctttgta
agggcacctggacagcccaaaattgatcatctgaggaggctccatctaggagcgtaccca
acagaagaatgcaagtcatgtaccaggtgtggctgtgttaccatgctgaaatcgccaaac
aaagtcactgccgtgaagcagtgggagcagcgctggatcaagaactgcttgtgtgggggg
ctgtggaggaggatgcctctcagctattcctga
DBGET
integrated database retrieval system
