Oceanobacillus jeddahense: NP439_00180
Help
Entry
NP439_00180 CDS
T08779
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ojd
Oceanobacillus jeddahense
Pathway
ojd03030
DNA replication
ojd03430
Mismatch repair
ojd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ojd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NP439_00180 (dnaX)
03430 Mismatch repair
NP439_00180 (dnaX)
03440 Homologous recombination
NP439_00180 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ojd03032
]
NP439_00180 (dnaX)
03400 DNA repair and recombination proteins [BR:
ojd03400
]
NP439_00180 (dnaX)
Enzymes [BR:
ojd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NP439_00180 (dnaX)
DNA replication proteins [BR:
ojd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NP439_00180 (dnaX)
DNA repair and recombination proteins [BR:
ojd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NP439_00180 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
DnaX_C
RuvB_N
AAA_30
AAA_22
TIP49
AAA_19
AAA_5
AAA_assoc_2
AAA_16
RCF1-5-like_lid
PIF1
AAA_7
Mg_chelatase
AAA_14
AAA_2
Glyco_tranf_2_5
AAA_28
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
UUI03189
LinkDB
All DBs
Position
39740..41449
Genome browser
AA seq
569 aa
AA seq
DB search
MSYQALYRVWRPRTFEDVVGQQHITRTLQNAITQDKFSHAYLFSGPRGTGKTSAAKIFAQ
TINCEHAPVKEPCNECAACRGIQDGSISDVIEIDAASNTSVDDIRDIRDKVKYAPSAVPY
KVYIIDEVHMISVNAFNALLKTLEEPPKHVVFILATTEPHKIPLTIISRCQRFDFKPISN
QAIVDRMQKIMQAEDVSVTEEALESVALAAEGGMRDALSILDQAISYSEEQVELEDVLAV
TGGVSQEVLTEIVRAMIGQDVQTVLNGLDHMIQTGKDPGKFVQDLIYFMRDLLLYKSSPG
LGNLLERAVANEAFEALSEQVENSWIQHAIIELNQCQQEMKWSNSPKIFIEVALLSITDQ
FGKTQAPGQIQSEAVEQSAVVGQLQQKLQAMERDIAKLKEAPPQQQEAGGSASAPERRRP
NSRNTRNTYKIPFDRIRDTLGKAEKKELKDVHAQWANFLNQLKTTNAPAHATIQDSKPAA
ASADTLIVAFKYEIHCSLFLDHREMVESILGNLDKHRTIIPIPEKEWNDLRSEYIQKQEK
PDEPKKPEGDPLVDEARKLFGDDLLEIHD
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaagctttataccgtgtctggcgaccaaggacatttgaagatgttgtagga
cagcagcatatcacgagaacattacaaaatgccattacccaagataaattctcgcatgct
tacctattctctggcccaagaggaacagggaaaacaagtgctgcaaagatttttgcgcaa
accattaattgtgagcatgctcctgtcaaagaaccgtgcaatgagtgtgcggcatgcaga
ggaattcaggatggttctatttccgatgtcattgaaattgatgcagcatcgaatacaagt
gttgatgatatccgtgatattcgggataaagtaaaatatgcaccaagcgctgtgccttat
aaagtgtacattattgatgaagtgcatatgatatctgtcaatgcatttaatgcgcttttg
aaaacattggaagagccaccaaagcatgtggtatttatccttgcaacgacagaaccacat
aaaataccattaacgattatctctcgttgtcagcgttttgattttaaaccgatttccaac
caagccattgtagatagaatgcagaaaattatgcaagcagaggatgtttctgttacagag
gaagctttagagtccgtagcattagcagcagaaggtggtatgcgtgatgctttgagtatt
ttagatcaagctatttcctatagtgaggaacaggtggagttagaagatgtgcttgccgta
accggcggggtatctcaagaggtccttacggagattgttcgtgcaatgattgggcaggac
gtacagacagtgcttaatggattggaccatatgattcaaacaggaaaagatccagggaag
tttgtgcaggatctaatctactttatgcgtgatttacttttatataaaagttcgccagga
ttgggtaacttattagagcgggctgtagcaaatgaagcttttgaagcattgtctgaacag
gttgaaaatagttggatccagcatgcgattatagaactgaatcaatgccagcaggaaatg
aaatggtccaacagtccgaaaatttttattgaggtagcgctgttatccattacagatcaa
tttggaaaaacgcaagcaccggggcaaatccagtcagaagcagtggaacagtcagctgtt
gtcgggcagcttcagcagaaattgcaggcgatggagcgcgatatagcgaaattaaaagaa
gctccgccgcagcagcaggaggctggaggttcagcttctgcacctgaaagacgccgtcct
aattctagaaatacacgaaacacatataagattccatttgatcggattcgtgatacacta
gggaaggcagagaaaaaagagctgaaagatgttcatgcacaatgggcaaacttcttaaat
caattaaaaacaacgaacgcacctgcacatgctacaattcaggacagcaaacctgcagcg
gcatccgcagatacactaattgttgcgtttaaatatgagattcattgctctttattcctt
gatcatcgagaaatggtagaatccatattaggtaatttagataaacatcgcacgattatt
ccaattccggagaaagaatggaatgatttgcgtagtgaatatattcaaaagcaagaaaaa
cctgatgaaccaaagaaaccagaaggagatccgcttgtagatgaggctcgaaagctcttt
ggtgatgatcttttagaaattcatgattaa
DBGET
integrated database retrieval system
