Oceanobacillus jeddahense: NP439_06040
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Entry
NP439_06040 CDS
T08779
Symbol
abc-f
Name
(GenBank) ABC-F type ribosomal protection protein
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
ojd
Oceanobacillus jeddahense
Brite
KEGG Orthology (KO) [BR:
ojd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ojd03012
]
NP439_06040 (abc-f)
Translation factors [BR:
ojd03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
NP439_06040 (abc-f)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
ABC_tran_CTD
SMC_N
AAA_29
MMR_HSR1
AAA_22
RsgA_GTPase
TsaE
AAA
NACHT
Roc
AAA_24
Dynamin_N
AAA_14
AAA_25
AAA_16
AAA_23
AAA_7
MeaB
AAA_30
RNA_helicase
RuvB_N
ATP-synt_ab
AAA_18
VapE-like_dom
AAA_28
nSTAND3
cobW
MobB
NB-ARC
T2SSE
PIF1
SRP54
AAA_15
ATPase_2
NTPase_1
YobI-ATPase
Motif
Other DBs
NCBI-ProteinID:
UUI04224
LinkDB
All DBs
Position
complement(1191698..1193632)
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AA seq
644 aa
AA seq
DB search
MILMQLNGISKSFGAEEILSNIKMEVKDNERIAIVGRNGAGKSTLLKIMAGEMPFDDGEM
FKPKDLTFGYLSQHMTLESGKTIWKEMLDVFSPLLTMEKKLRELELQMADASSMDEADYQ
QLLIRYDKLQNEYQLNGGYTYQAEIKSVLNGLSFGDYDYDTSITDLSGGQKTRLALGRLL
LQKPQLLILDEPTNHLDIDTLTWLEGYLVNYPGAIIIVSHDRYFLDKTVSIVYEISRHHS
KKFHGTYSNYLTQKALDYEQEKKEFEKQQTEIKRLEDFIQRNLARASTTKRAQSRRKKLE
KIDRLDRPAGDESSASISFQVNRQSGNDVLKIKELTFQYPDTEQPIFKNITLHANRGDRI
ALVGPNGVGKTTLLKTIIGKMQPDQGEIQLGTNVQVGYYDQEQANLNSNKTVLQELWDDY
PLINEKDIRTILGNFLFSGEDVLKPVSALSGGEKSRLALAKLKMQKANLLILDEPTNHLD
IDSKEVLESALIDFPGTIIFVSHDRYFINRIADQVAEMQTSGVKMYLGDYDYYLEKKAEE
EEWRLLELQKQQKVTEEDTVSAKKLSFQEEKQRQREERKRKRRIEELETLIEQKEEAIAD
IEAEMTKPDVFDDHKKTMELTDSLTTLKEELDQFMDEWAVLEED
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgattttaatgcaattaaacggaatctctaaatcctttggagcagaagagattctttct
aacataaaaatggaagttaaagataatgaacgtatagcaattgttggccggaacggagcc
ggaaaatcaacacttctcaaaataatggcaggcgaaatgccttttgatgatggtgaaatg
ttcaagccaaaagatttaacatttggctacctctctcagcatatgacattagagtctgga
aaaacgatttggaaagaaatgctggatgtcttttctccacttctgactatggagaaaaaa
ttacgggagctggaattacaaatggcggacgcttctagtatggacgaagcggactaccag
cagctgctcatccgatatgataagcttcaaaacgagtatcaattgaatggcggatatacg
tatcaagcggaaataaaatcggtattaaatggattatcctttggtgattatgattatgat
acttcaattacagatctaagcggcggacaaaaaacaaggcttgctcttggtagactcctc
ttacaaaaaccgcagcttcttattctcgatgaaccgacaaaccatttagatattgataca
cttacatggttagaaggatatttagtaaattacccaggagcgatcattattgtttcccat
gaccgctactttttagacaaaacggtatctattgtttatgaaatttccagacatcattct
aaaaaattccatggaacctatagtaactatttaacacaaaaagcacttgattatgagcaa
gagaaaaaagaatttgaaaaacagcaaacagaaataaagcggttggaagattttattcag
cgtaatttagcacgtgcttctacaacaaaacgagctcaaagcagaagaaaaaaacttgaa
aaaatagatcgccttgaccgccctgccggggatgaatcttcagcatctatttcctttcag
gtaaaccgccagagcgggaatgatgtattaaaaataaaagagttaacatttcaatatcca
gatacagagcagccaatttttaaaaatatcaccttgcatgcgaaccgtggtgatcgtatc
gcattagttggaccaaatggagtcggtaaaaccaccttgttaaaaacgattattggcaag
atgcagcctgatcaaggggagatacaactaggcacaaatgttcaagttggctattatgac
caggaacaggcaaatttaaactcgaataaaaccgttcttcaagagctatgggatgactat
ccgctaattaatgaaaaagatattcgtaccattctcggaaattttctattctctggtgag
gatgtcttaaagcctgtatccgccttaagtggtggtgaaaaatcaagacttgccttggca
aaattaaaaatgcagaaggcaaacttacttatccttgatgaaccgacaaatcacttggat
attgatagcaaagaagtattagaaagtgctttaatcgattttcctggcacaattatattt
gtttcccatgaccgttattttattaaccgaattgccgatcaagttgcagaaatgcaaaca
agcggtgtgaaaatgtatcttggtgactatgattattatttagagaaaaaggcagaagaa
gaagaatggcgtttgttagagctccaaaaacaacaaaaagtaaccgaagaggataccgtc
tctgcaaaaaaactcagcttccaggaagaaaagcaacgccagcgtgaagaacgtaaacga
aaacgccgaattgaagaattagaaacattaattgaacagaaagaagaagcgattgcagat
atcgaagcagaaatgaccaagccagacgtatttgatgatcataaaaagacaatggaatta
acggatagcttgacaacgttaaaagaagaattagaccagtttatggatgaatgggctgtg
ctagaagaagattaa
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