Oceanobacillus jeddahense: NP439_08065
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Entry
NP439_08065 CDS
T08779
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ojd
Oceanobacillus jeddahense
Pathway
ojd03420
Nucleotide excision repair
ojd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ojd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NP439_08065 (pcrA)
03430 Mismatch repair
NP439_08065 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ojd03400
]
NP439_08065 (pcrA)
Enzymes [BR:
ojd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NP439_08065 (pcrA)
DNA repair and recombination proteins [BR:
ojd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NP439_08065 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
NP439_08065 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ResIII
DEAD
AAA_22
Plant_vir_prot
Motif
Other DBs
NCBI-ProteinID:
UUI04597
LinkDB
All DBs
Position
1617602..1619845
Genome browser
AA seq
747 aa
AA seq
DB search
MEQTLEAMINTLNPEQQKAVRHTDGPLLIMAGAGSGKTRVLTHRIAYLMGEKEVSPRNIL
AITFTNKAAREMKERVAKLVGPQGQYMWVSTFHSMCVRILRRDIDRIGYSSNFSILDSGD
QLSVVKQVLKNLNIDPKKFDPRAMLGQISAAKNELITEEEFAKNAGNFYDRQVAQVYEGY
QKVLRKNQSLDFDDLIMQTIHLFDRVPEVLEYYQRRFQYIHVDEYQDTNHAQYFLVKQLA
ERYQNLCVVGDSDQSIYRWRGADITNILSFEKDYPSTKTVLLEQNYRSSKSILQAANKVI
GNNSGRKPKNLWTDNDDGKKISYYKGATEQEEALYIADTIQQLTRGGKYQPGDIAILYRT
NAQSRAIEDTFVKSAISYQMIGGTRFYDRKEIKDMIAYLRLITNPDDDISFQRVVNEPKR
GIGKTSIERLQAYAAEHDISLYEAVKEVDFTGVSKKAANALAGFQSLIRTLTQQQEFLTA
TDMVEAVLERTGYEEMLNNERSIEAQSRLENLEEFKTVTQEFEKANEDKTLIAFLTDLAL
IADIDRVDEEDPDQTQKITLMTLHAAKGLEFPVVFLIGMEENVFPHSRSMFDEEEMEEER
RLAYVGITRAEQELYLTHAQMRTLYGRTNMNPISRFINEIPEELMDGMETTQKIPFGKAD
NMRNSFGARQKQETPPKRRAEKMQGPASSGAESEGWSVGDKAAHKKWGTGTVVRVQGEGD
KLELDVAFPAPTGIKRLLAKFAPITKE
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaacgcttgaagcaatgataaatacattaaacccggagcagcaaaaagctgta
cgacatacagatggcccgcttttaattatggcaggggcaggtagtgggaaaacgcgtgta
ttaacacatcggattgcttatctgatgggagagaaggaagtatctccacgtaatatttta
gcgattacctttacgaataaagcagcaagagaaatgaaagagcgtgtagcaaaattagtt
ggccctcaaggtcagtatatgtgggtttctacattccactccatgtgtgtccggatttta
cgtcgggatattgaccggattggatattcctcgaacttttccattttagacagtggtgat
cagttgtcggttgtaaagcaagtacttaaaaatttaaatattgatccaaagaaatttgat
ccccgtgcgatgctgggacaaatcagtgctgcaaaaaatgaattgattaccgaggaagaa
tttgcgaaaaatgctggtaacttttatgaccgtcaagtagcacaggtttatgaaggatat
cagaaggtcctgcgaaaaaatcaatccttagatttcgatgatttgattatgcaaactatc
catttatttgatcgtgtaccggaagtattggaatattatcaaagacgatttcaatatatt
catgtcgatgagtaccaggatacgaaccatgcacaatactttttggtgaagcagcttgcc
gaaagataccaaaacttatgtgtagtcggcgattcagaccagtctatttaccgttggcga
ggggctgatattacgaatatcttgtcttttgaaaaagattatccttcgacaaagacggtg
ttattagaacaaaattatcgttcttccaagtctattctacaggcagcgaacaaagtgatt
ggaaataactcaggacggaagccgaaaaatctttggacggataatgatgatggtaaaaag
atatcctattataaaggagcaacagagcaagaagaggctttgtatattgctgataccatt
cagcaattaacccggggcggcaaatatcagcctggtgacattgcgattttatatcgtacc
aatgcgcaatcgcgtgccattgaggatacatttgtgaagtccgctatcagctatcaaatg
attggcggtactcgtttctacgaccgcaaagaaatcaaagatatgattgcttatttacga
ttaatcacgaacccggatgatgatatcagctttcagcgtgtagtgaatgaaccgaaaaga
ggaataggaaaaacatcgattgaacgtttacaggcatacgctgcagagcatgatatctcc
ctctatgaagctgtgaaggaagttgatttcacaggtgtttccaaaaaagccgccaatgca
ctggctgggttccaaagtcttattcgtacacttacgcagcagcaggaatttttaactgcg
acagatatggtggaagctgtattggaacggacaggttatgaagaaatgctgaataatgaa
cgctcgattgaagcacagtcgcgattggagaacttagaagagtttaaaacagttacccaa
gaatttgaaaaagcaaatgaagataaaacattaattgcctttttaacggatttggcactg
attgcggatattgaccgtgttgatgaagaagatcctgaccaaacccaaaaaatcacttta
atgacgctgcatgcagcaaaaggattggagtttcctgttgttttcctgattggaatggaa
gagaatgtctttccgcacagccgttccatgtttgacgaggaagagatggaagaagaacgg
cgtcttgcctatgtaggcatcacaagagcagagcaggaactttatttgactcatgcacaa
atgcgtacattatatggccgtaccaatatgaatccaatcagccgctttatcaatgaaatt
cctgaagaattaatggatggcatggaaacgactcaaaaaattccatttggcaaagctgat
aatatgcgaaatagttttggagcacgccagaagcaggaaacacctccgaaaagacgtgct
gaaaagatgcaaggacctgcatctagtggtgcagaatcagaaggatggtccgtcggtgat
aaagcagcccataaaaaatggggaacgggtacggttgtaagagtgcagggagaaggagat
aagctggaattagatgttgcatttcctgctccaaccggtatcaaacgtcttcttgcaaaa
tttgccccaataacaaaggagtaa
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