Oceanobacillus jeddahense: NP439_08315
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Entry
NP439_08315 CDS
T08779
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
ojd
Oceanobacillus jeddahense
Pathway
ojd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ojd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NP439_08315 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ojd03400
]
NP439_08315 (uvrA)
DNA repair and recombination proteins [BR:
ojd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NP439_08315 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NP439_08315 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_29
nSTAND1
AAA_15
UvrA_DNA-bind
AAA_16
DnaJ_CXXCXGXG
AAA_25
AAA_22
RsgA_GTPase
T2SSE
AAA_23
ATPase
AAA_33
SLFN-g3_helicase
nSTAND3
Zn_ribbon_8
AAA_14
AAA_18
NTPase_1
ATPase_2
AAA_24
RNA12
RecA
AAA_7
BCA_ABC_TP_C
Zn_ribbon_6
PhoH
Cytidylate_kin
Zn_ribbon_TFIIB
Rad17
LEF-4
DUF7351
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
UUI04642
LinkDB
All DBs
Position
1670876..1673332
Genome browser
AA seq
818 aa
AA seq
DB search
MHNIMTVKGARENNLKNLSVFIPKNKLIVVTGPSGSGKSTLALDTLFNECQRQYLESMGM
QGINKPKVDSISGLSPAISINQHITNRNPRSTVGTMTDMYTSLRMVFEKLGERACPKCQH
RMDPIAYEGEVEREADSFTEYIFCPNCNERMEKLTRTHFSYNTTEGACPTCKGLGETVAI
HLPSVFHEDLSLEDGAVDIFAGRYGEYQIAVLKAAFRYYQLPDADNVAIKHFNEGQKAIL
HHGVESNEVKQLFPNVKPPKTVEKGKFPGVLTSMWRRYAEHDGSSAEADAYFYSQTCPDC
HGDRLNEVSRAVTVGGWTIPQLVVHSLEEMEAWIHNLETSLEQTSYQLVETFIQDIKTKL
SRIIKIGLGYLTLDRQVITLSGGEAQRIRLSALLDSALTGVLYIMDEPTVGLHPKDTAGL
ISILKHLRDLGNTVLLIEHDVDVMKEADHIIDIGPGAGKLGGTVVGQGSLQELISEETSV
TGQYLRAEKPEKVNYRTGKEEGITIYHAIVNNLQDVTVTFPKGCLTAVTGVSGSGKSSLL
FDVLAKANETIYEGFEKVTGLEAYDQMIIVGQSPLSRMKRSNTATYIDLFTAVRLLFAKL
PEAKEKNFSSKHFSFNTAGGRCENCQGLGYVTTNMLFFPDLEVVCPECQGRRFKKEVLEV
KYQGYSINDILESSVHECLSIFEGEKKIQTILKLLTEIGLGYLKMGQSLTTLSGGEGQRL
KLAKELMKQGKKTSLYLLDEPTTGLHPNDTIQLLKLLNRLVDAGNTVIMVEHNSQVIEAA
DWVVDLGPEGGAKGGIVIAEGTPEMIKANKDSFTGQYL
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgcataatataatgaccgtaaaaggagcccgggagaataatctaaaaaatctttctgtg
tttatccctaaaaacaaactgattgttgttacaggtccctcaggatctggaaaaagcacg
ctggctctggacaccttattcaatgaatgccagcgtcaatatttagaatcaatggggatg
cagggaatcaataaaccgaaagttgactctatcagcgggttatcacctgcaattagtatc
aatcagcatattaccaatcggaatccgcgttcgacagtcgggacaatgacggatatgtat
accagcttacgaatggtatttgaaaagcttggagaaagagcttgtcccaagtgtcagcat
agaatggatcccatagcttatgaaggagaagtggagagagaagcggacagctttacagaa
tatatcttttgtccgaattgcaatgagcgaatggaaaaactgacgcgaacccatttttct
tataatacaacagaaggggcttgtccgacttgtaaaggattgggagaaacggtagctatt
catttgccatcggtttttcatgaggatctttctttagaggatggtgctgtggatattttt
gccggacgttatggagaatatcaaattgctgttttaaaagcagcctttcgttattatcaa
cttcccgatgcagataatgtagctatcaagcattttaatgaaggacaaaaggctattctt
caccatggagtagaaagtaatgaggtaaagcagctatttccaaacgtaaagcctcccaaa
acagtagagaaaggaaaattccccggcgtattaacctctatgtggcgccgttatgcagag
catgatggttcttcagctgaagcagatgcttatttctattcgcagacttgtcccgattgt
catggagatcgtttaaatgaagtgagtagagcagttactgttggcggctggacgattcca
caattggttgtccattccttagaagaaatggaagcttggatacacaatttggaaacatca
ctggagcagacaagttatcagcttgtcgaaacatttatacaagatataaaaacaaagctt
tcccgtattatcaaaataggactgggttatctgacgttagatagacaagtcattacgtta
tccggtggggaggcacagcggatacggttatctgcactgctcgattctgcacttaccggc
gtattatatattatggacgagccgacagttggtctgcatcctaaggacacagccggcctg
attagtatcttaaagcacctgcgtgatttaggaaataccgttttattaattgagcatgat
gttgatgtgatgaaggaagcagatcacattattgatattggtccgggagctggaaagctt
ggagggactgttgttggacaaggaagcttgcaagaattaatcagtgaagaaacatctgtt
acaggccaatatttgcgtgctgaaaaaccggagaaagtgaattatcgaactgggaaagag
gaaggaataacgatatatcatgctattgtaaataatcttcaggatgtgactgtaaccttt
cctaaaggctgtttaacagcagtaaccggcgtttccggttcaggaaaatcttccctacta
tttgatgtactggcaaaagcaaatgagacaatttatgaaggatttgaaaaagtaaccggt
ctggaagcttatgatcagatgattattgtcggccagtctccgctcagcagaatgaaacgg
tcaaacacagcgacttatattgatttatttacagccgttcgtttgttgtttgctaaattg
cctgaagcaaaagaaaagaacttttcatcaaagcatttttcttttaataccgctggagga
cgttgtgaaaactgtcaagggcttggttatgtaacgaccaatatgctctttttccctgat
ttagaggtagtatgtccagagtgtcaggggagaagatttaaaaaagaagtgttagaagtg
aagtatcaaggttactctatcaatgatattcttgaaagctctgtgcatgaatgtctttca
atctttgaaggggaaaagaagatacaaacgattttaaaactcttgacagaaatcggtctg
ggctatttaaaaatgggacaatccttaactactttatcaggaggagaaggacaaagatta
aagcttgcaaaagagttaatgaagcagggcaagaagacttctctttatttattagatgag
ccgaccactggattacatccgaatgatacgattcagcttctcaagctgttaaatcgtttg
gtggatgcgggaaacacggtaatcatggtggagcataatagtcaggttattgaagcggca
gactgggtagttgatttaggtcctgaaggtggcgcgaaaggaggaatagtgattgcagag
ggaacaccggaaatgataaaggcaaataaggattcatttacagggcagtatttgtag
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