Oceanobacillus jeddahense: NP439_11370
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Entry
NP439_11370 CDS
T08779
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
ojd
Oceanobacillus jeddahense
Brite
KEGG Orthology (KO) [BR:
ojd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ojd03400
]
NP439_11370 (addA)
Enzymes [BR:
ojd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NP439_11370 (addA)
DNA repair and recombination proteins [BR:
ojd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
NP439_11370 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
DEAD
AAA_12
YodL
BRX_N
AAA_30
ResIII
DUF5710
CdiI_2
Motif
Other DBs
NCBI-ProteinID:
UUI05197
UniProt:
A0ABY5K230
LinkDB
All DBs
Position
2307742..2311458
Genome browser
AA seq
1238 aa
AA seq
DB search
MVKWTIEQEQAIYQSGTDILVAAAAGSGKTAVLVERIIQKLLKEEDAINIDELLVVTFTN
AAAQEMRARVGAALEKALVDKPDSLHLKKQLSLLQKASISTLHSFCLDIVRKNAYMIDLD
PSFRIADDIEMDMIKREVLDELLEGWYDDANTEQETFFEVVNRFSNDRSDRDVEELILRT
ANFAVQHPSPKEWLHQLTANYNIDQSWTEETIPWLQEVKKEIANQLKAMKQENALAIAVA
REPDGPYHYLDALEKDTAMLEAATEKLSQWDELHQFVQDSKFAALSRKKADDNPEKREQV
KDFRKKVKDRWDKMKEKWFVRSLDAHIQDMQEMAPVLKQMTLMVEDYMDKFQNRKKEQAI
VDFNDLEHYCLDILTETNQAANKTQASSIALQMQKQFKEVLVDEYQDTNLVQESILQLVR
NPEDDGNMFMVGDVKQSIYGFRHAEPSLFIEKYKQFAANDDPAERIDLNRNFRSREEVLI
GANYLFRQLFDEEVGDIAYDEDAELIYGNRMYDEFPASSDPELLLIDSPQGQKSNEGEET
EEDLEKAQIEARAYAKKIQEWIGVGENGSPMQVVDKDKGQHRNLMYRDIVILMRSMTWAP
VIMDELKKQGIPVYAELTSGYFEAIEIRVMISLLKIIDNPRQDIPLAAVLRSPIVGLKEN
DLAAIRLADRHGNFYDALSAYMEKEDNDVTEQLKEFQTLLENLRLSAQQGALSELIWQIY
RESGYYDFVGGIPGGKQRQANLRALYDRARSYEETSFRGLYRFLRFIERMEEEQKDLGAA
RALSEQEDVVRIMTIHKSKGLEFPVVILGGTAKEFNMMDLNEKYLLHKDLGFASKFIDPE
KRIQYSTLFYHAMREKIRREQLSEEIRLLYVALTRAEEKLLMVGTVPSAEKRKAAWSWIG
QHSDWLLPAYFRVGAKSYLDWIGPALIRHAHGEALREEEPGDHILSDITKDPSKWEVDIY
LSEDIVSFENRVQEKQDALKSQIRNWDLIAQEDNELDAWVDHRLSYQYPYQEAVHSRAKQ
SVTELKRQLEQKDTYSDERMVPKSSMRPITRRPRFMQAEKKLTPAEKGTALHTVMQHLPF
TAPLTKEEIEEFIEKLVQEEKMTAAEADSISSSDIVAFLESAIAQKIFDEKKIFKEVPFS
LMLPAEKVYADWQDVSKEKVLIQGVIDCIIPAENGWIILDYKTDMITEDITEKLEEKLKK
RYKTQLELYRYAIEEIWKQPVEETYLYFFSKGLLIKGE
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
gtggttaaatggacaatagagcaggaacaggcaatttatcaaagtggtacggatatcctt
gtagctgcagcagctggatccgggaaaacagccgtccttgtagagcgcattattcagaag
cttttaaaggaagaagacgcgattaatatagatgaattactcgtcgttacctttacgaat
gctgcagcacaggaaatgcgagcaagagttggagcggcattggagaaggccttggttgat
aaacctgactcacttcatttaaaaaaacagctctccttattgcaaaaagcatctatttca
acactgcactccttttgtttagatattgtccggaaaaatgcttatatgattgatttagac
ccatctttccgaattgcggatgatatagagatggatatgataaagcgggaggttctggat
gaattgctggaaggttggtatgatgatgcaaatacagagcaggaaacattttttgaagta
gtaaatcgcttttctaatgatagaagtgatagagatgtagaagaattaatcttaaggact
gcaaattttgcagttcaacatccatctccaaaagagtggttgcaccagctgactgcgaat
tataatattgaccaatcatggacagaagagaccatcccttggctacaggaagtcaaaaaa
gagattgccaatcaattaaaagcaatgaagcaagagaatgctttggcaattgcggttgca
agagagccggacggaccatatcattatctggatgctttggaaaaggacacagcgatgctg
gaagcagcaacggaaaagttatcacaatgggatgagctgcaccaatttgttcaagatagc
aagtttgcggcgttatccagaaaaaaagcagacgataatccagagaaacgggagcaggta
aaagatttccgtaaaaaagtcaaagacagatgggacaagatgaaggaaaagtggttcgta
cgcagcctggatgctcatattcaagatatgcaagaaatggctcctgttttgaaacaaatg
actttgatggtagaagactatatggacaagtttcaaaatcgaaaaaaagagcaggctatt
gttgattttaatgatttggaacattattgtctggacattttaacagaaacaaatcaagca
gctaacaaaacgcaggcttcttcaattgctttacagatgcagaagcaatttaaggaagtg
ctggttgatgaatatcaggatacaaacctggttcaggagagtattttacaattagtccgt
aaccctgaagatgacggaaatatgtttatggtaggcgacgtgaaacaaagtatttatgga
ttccgtcatgccgagccttccttatttatcgaaaagtataaacaatttgcagcaaacgat
gatccagcagaacgaattgacctgaatcggaatttccggagcagggaggaagtattgatt
ggtgcaaactatctattccgtcagctttttgatgaagaggttggtgatattgcctatgat
gaagacgctgagctgatctatggtaatcgtatgtacgatgaatttcccgctagttccgat
ccggagttactgctgattgattctccacaaggacagaagtctaacgaaggagaagagacc
gaagaagatttagaaaaagcccaaattgaagcacgtgcctatgccaagaaaattcaagaa
tggattggtgtgggagagaacggttctccaatgcaagtagttgataaagacaaagggcag
catcgaaatttgatgtatcgtgatattgttattttaatgcgttcgatgacatgggcacca
gtgattatggatgagttaaaaaaacaaggtattcctgtctatgcagaattaacttcaggt
tattttgaagcgattgaaattagagtcatgattagtttattaaagattatcgataacccg
cgccaggatatcccgttggctgctgtattacggtcacctattgtcggattgaaagaaaat
gatttagcagctattcgtttagcagatcgtcatggaaacttttatgatgccctgtcagct
tatatggaaaaagaagataatgacgtgacagagcagttaaaagagttccagacgctgtta
gaaaatttaagactctccgcccaacagggagccctttctgaattaatttggcagatttat
cgggagtcaggttactatgattttgtaggcggtatccctggaggaaagcagcgtcaggcg
aacttacgcgcgctgtatgaccgggcgagaagctatgaagagacttctttccgtggttta
taccggttcttgcggtttattgagagaatggaagaagagcaaaaagatttaggggcggcg
cgtgcacttagtgaacaagaagatgttgtccggataatgacgattcataaaagtaaaggc
ttggaatttcccgtcgttattcttggtggaactgcgaaagaatttaatatgatggatcta
aatgagaagtatctattgcataaagatttaggttttgctagtaaatttattgatccggag
aaacgaattcaatattctactttattttatcatgctatgagagaaaaaataagaagagag
cagctatcagaggaaattcgtttattatatgttgccttaacacgtgcagaagaaaagctg
ttgatggtaggaacagttccttctgcagagaagcgaaaagcagcatggtcatggattggc
caacattctgactggctgttaccagcttatttccgggttggagcaaagagctatctggat
tggattggccccgctcttattcgtcatgctcacggagaagctttgcgggaagaagaacca
ggcgatcatatcttatctgatattacaaaggacccctccaaatgggaggtggacatttat
ttgagtgaagatattgtatcgtttgaaaatcgggtacaagagaaacaggatgctttaaaa
agtcaaatcaggaattgggatttgattgcacaggaagataacgagttagatgcttgggtt
gatcatcgtctatcctatcaatatccgtatcaggaggctgtacattcacgtgcgaaacaa
tccgtcaccgagttaaaacgtcagctggaacaaaaggatacctatagtgatgagagaatg
gttcctaagtcctctatgcgtccaatcacaagaagaccaaggtttatgcaggcggaaaag
aaattaactccagcggagaaaggaacggctctccatacagtgatgcagcaccttcctttc
actgctccactcacaaaagaagagatagaggagtttattgaaaagttagttcaagaggaa
aaaatgacagctgcagaagctgatagtatatcctcttccgatattgttgcgtttttagaa
tcagccattgcccaaaagatttttgatgagaagaaaatcttcaaagaagtgccattcagc
ttaatgttgccggcagaaaaggtatatgctgactggcaggatgtttcaaaagaaaaggta
ttgattcaaggggttattgattgtattattcctgcagaaaatggctggattattcttgat
tataaaacagatatgattacagaggatattacagagaagctggaagaaaagctgaagaaa
cgatataaaacgcagcttgagctttaccggtatgcaattgaagaaatctggaagcagcct
gtcgaggaaacgtatctttatttcttttcaaaagggctacttatcaaaggagaataa
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