KEGG   Oceanobacillus jeddahense: NP439_11855
Entry
NP439_11855       CDS       T08779                                 
Symbol
polX
Name
(GenBank) DNA polymerase/3'-5' exonuclease PolX
  KO
K02347  DNA polymerase (family X)
Organism
ojd  Oceanobacillus jeddahense
Brite
KEGG Orthology (KO) [BR:ojd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ojd03400]
    NP439_11855 (polX)
DNA repair and recombination proteins [BR:ojd03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA polymerase
    NP439_11855 (polX)
SSDB
Motif
Pfam: HHH_8 DNA_pol_B_thumb PHP HHH_5 DUF3701 DNA_pol_B_palm
Other DBs
NCBI-ProteinID: UUI05288
LinkDB
Position
2410975..2412687
AA seq 570 aa
MNKKDIIRLLEKIAVYMELKGENPFKISAYRKAAQAMEADDRSLSEIEDFTKMKGIGKGT
ATVITEFIEAGHSETLEALEKEVPAGLVPLLDLPGLGGKKLSKLYQELGVVDGETLKEVC
LSGKVEALPGFGKKSVEKIIAAIEDAGKRPERISIAIMLPIVEKVEAYLDEIPDIIRYSQ
AGSIRRMRETVKDLDFIIATDKPEEVKKALIGYPSIKNVIASGDTKVSITLEELYDINVD
FRLVSNGEFASTLHHFTGSKDHNVAMRQLAKSRGEKISEYGVEVEETGETLQFETEKDFF
NHFGLQFIPPEVRENTGEVEIFKEKQELIQLSDICGDLHMHTTWSDGAQSLTEMVDKVKS
MGYSYMAITDHSKFLRVANGLNEERLLKQREEINALNKKHPDFHIFSGVEMDILPDGSLD
FDDDFLKEMDFVIGAIHSSFQQSEEEIMNRLNNAMENPYVSIIAHPTGRLIGRRDGYKVN
LEQLIKKAKETNTALEINANPNRLDLSHEWAKKAQEAGVNLVIDTDAHNYQMLEHMQYGV
ATARKGWIKPSTVINTWSKEELKKFFNQGR
NT seq 1713 nt   +upstreamnt  +downstreamnt
atgaataaaaaagatatcattcgtttactggaaaaaatagctgtttatatggagttaaaa
ggagaaaatccatttaaaataagtgcctatcgaaaagcggcgcaagctatggaagcagat
gaccgcagtttaagtgaaatagaagattttacgaagatgaaaggcattggaaaaggaacg
gcaacggtaatcacagaatttatagaagcaggacattctgaaaccttagaagctctcgaa
aaagaagttccggctggacttgttcctttattggatttgcctggtttgggtgggaagaag
ttgtctaaactttatcaggaacttggtgttgtagacggagagactctaaaagaagtttgt
ttgtctggtaaggtagaggccttaccagggtttggtaaaaaatcagtggaaaaaattatt
gcagcaatagaggatgccggaaagagaccggaacggatttctatagcaattatgctccca
attgtggaaaaagtagaagcctacttagatgaaattcctgatattatccgttactctcaa
gcgggaagtatccggcgcatgcgtgaaacggtgaaggatcttgattttattattgctaca
gacaaacccgaagaagtgaaaaaagcattaattggctatccttctatcaaaaatgtaatt
gcaagtggagatacaaaggtatcgatcactttagaagagctttatgatattaatgttgat
tttcgtttggtttctaacggagaatttgcatcaactttacatcatttcaccggttcaaag
gatcataatgtagccatgcggcaattagcaaaatcgcgtggtgaaaaaattagtgagtac
ggtgtagaggtggaagaaacaggagaaacacttcaatttgaaacagaaaaagattttttt
aatcatttcggtctacaatttattccgccagaggttcgagaaaacactggggaagtagaa
atatttaaagaaaagcaagaattaatccagctctctgatatttgtggggatttgcatatg
cataccacctggagtgatggcgcacagtctttaactgaaatggtggataaagtgaaaagt
atgggctattcgtatatggcaattaccgatcactctaaatttttacgagtagcaaatgga
ttaaacgaagaacgtcttttgaaacaacgggaagaaattaatgcattaaataaaaagcac
cccgattttcatatcttttctggagtagaaatggatattttaccagacggaagtttagat
ttcgatgatgatttcctaaaagaaatggactttgttatcggcgcgattcattccagcttt
caacaatctgaagaagagattatgaataggttaaacaatgcaatggaaaatccatatgtt
tctattattgctcatccaacaggaaggcttatcggtagaagagatggttataaagtgaat
ttagagcaattaattaaaaaagcgaaagaaacaaatacagcattagaaattaatgccaac
ccaaatcgtttagacctgtctcatgaatgggctaaaaaagcacaagaagcaggcgtgaat
ctggtcattgatacggacgcgcataactaccaaatgcttgaacatatgcaatacggcgta
gcgactgcccgcaaaggatggattaaaccatccaccgtcatcaacacatggtcaaaagaa
gagctaaagaaattttttaaccagggaagataa

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