Oceanobacillus jeddahense: NP439_11920
Help
Entry
NP439_11920 CDS
T08779
Symbol
sdhB
Name
(GenBank) succinate dehydrogenase iron-sulfur subunit
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
ojd
Oceanobacillus jeddahense
Pathway
ojd00020
Citrate cycle (TCA cycle)
ojd00190
Oxidative phosphorylation
ojd00650
Butanoate metabolism
ojd00720
Other carbon fixation pathways
ojd01100
Metabolic pathways
ojd01110
Biosynthesis of secondary metabolites
ojd01120
Microbial metabolism in diverse environments
ojd01200
Carbon metabolism
Module
ojd_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ojd_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ojd_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
ojd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
NP439_11920 (sdhB)
00650 Butanoate metabolism
NP439_11920 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
NP439_11920 (sdhB)
00720 Other carbon fixation pathways
NP439_11920 (sdhB)
Enzymes [BR:
ojd01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
NP439_11920 (sdhB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_8
Fer4_7
Fer4_9
Fer4_10
Fer4_17
Fer4_16
Fer4_2
Fer4
Fer4_3
Fer4_4
Fer4_20
Fer4_13
Fer4_21
Fer4_18
Motif
Other DBs
NCBI-ProteinID:
UUI05301
LinkDB
All DBs
Position
2427856..2428620
Genome browser
AA seq
254 aa
AA seq
DB search
MAEQSKVTFIITRQDSRDAAPYEETFEIPYRQNMNVISALMEIRKNPVNSKGEQTTPVMW
DMNCLEEVCGACSMVINGTARQSCAALVDQLEQPIRLEPMSTFPIVRDLIVDREQMFDAL
KQVKAWIPIDGTHDLGPGPRMPENKRQWAYELSKCMTCGVCLEACPNVNDNSNFIGPAAI
SQARLFNAHPTGEMNASDRLNGLMEDGGIDGCGNSQNCVQVCPKGIPLTTSIAAMNRATN
IQAFKNFFGSDTAL
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggctgagcaaagtaaagttacctttatcataactagacaagacagccgggacgctgct
ccttatgaggaaacgtttgagataccttatagacagaatatgaatgttatttctgcctta
atggaaatccgaaaaaatcctgtaaacagtaaaggagagcaaactacaccggtcatgtgg
gatatgaactgcttagaggaggtttgcggtgcgtgttcgatggttatcaatggcacggcg
agacagtcctgtgcagcattagttgatcagctcgagcagccaattcgcctggagccgatg
tctactttcccgattgttcgtgatcttattgtagaccgtgagcaaatgtttgatgcttta
aaacaagtaaaagcatggattcctattgatggaacgcatgatttaggtcctgggccgcgt
atgccggagaataaacgtcaatgggcatatgaattatccaaatgtatgacatgtggtgtc
tgtttggaagcttgtccaaatgtaaatgacaactcgaacttcattggtcctgctgcgatt
tctcaagcgcgtttgtttaacgcgcatccaactggcgagatgaatgccagtgaccgcttg
aacgggttaatggaagatggagggattgacggctgcgggaattctcagaactgtgtacaa
gtttgtcctaaaggaattcctttgacaacttcaattgcagcaatgaaccgtgcgacaaat
attcaagcattcaagaatttctttggaagcgacacagcactttaa
DBGET
integrated database retrieval system