KEGG   Oceanobacillus jeddahense: NP439_12190
Entry
NP439_12190       CDS       T08779                                 
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
ojd  Oceanobacillus jeddahense
Pathway
ojd03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ojd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    NP439_12190 (ruvB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ojd03400]
    NP439_12190 (ruvB)
Enzymes [BR:ojd01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     NP439_12190 (ruvB)
DNA repair and recombination proteins [BR:ojd03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     NP439_12190 (ruvB)
    RecFOR pathway proteins
     NP439_12190 (ruvB)
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 Mg_chelatase TIP49 AAA_14 NB-ARC nSTAND3 AAA_22 AAA_16 AAA_3 RNA_helicase AAA_17 DUF815 AAA_18 Rad17 TsaE AAA_28 ABC_tran NTPase_1 IstB_IS21 NPHP3_N Cytidylate_kin AAA_24 AAA_25 Sigma54_activ_2 Resolvase AAA_33 Parvo_NS1
Other DBs
NCBI-ProteinID: UUI05350
LinkDB
Position
2484161..2485168
AA seq 335 aa
MDERMIDGNLQDEDVSIEQSLRPLQLEDYIGQPKVKENLSIFIQAAKMREEPLDHVLLFG
PPGLGKTTLASIIANEMGVQFRSTSGPAIERAGDLAAILSSLEPGDVLFIDEVHRLPRSV
EEVLYPAMEDFFIDIVIGSGPSARSVRIDLPPFTLVGATTRSGLLSAPLRDRFGVLSRLE
YYDVADLRQIVMRTAEIFHMTISEDAAVEIASRSRGTPRIANRLLKRVRDISQVKGETEI
SFETSRQALKMLQVDESGLDHIDHKLLKEIIEGFNGGPVGLDTIAATIGEESQTIEEVYE
PFLLQLGFIQRTPRGRKVTPKAYEHFGIPMINGEE
NT seq 1008 nt   +upstreamnt  +downstreamnt
ttggatgaacggatgattgacggtaacttgcaagatgaggatgtatcgatagagcaaagt
ttaagaccgctgcaactagaggattacattggtcaacccaaggtaaaagaaaatttaagt
atctttatccaagcagccaaaatgcgggaagaaccgcttgatcatgtattgctgttcggg
ccgccgggattgggtaaaacaacactggcttctattattgctaatgagatgggagttcaa
ttcaggtctacttctggtccggccattgagcgtgcaggagatttggcagcaatactttct
tcattggagcctggagacgtattatttattgatgaagtacatcgccttccacgatctgtg
gaagaagtgctgtatccggcaatggaagacttttttatagatatcgtaataggaagcgga
ccaagcgcccgtagtgtccgcattgatttgcctccgtttacactggtaggagcgactaca
cgatctggactgttaagtgcgccgttacgtgaccgatttggggtactcagccgcctggaa
tattacgatgtggcggacctgcgccaaatagtcatgcgtacagccgaaatatttcatatg
accatctcggaagatgctgctgtagaaattgccagcaggtccagagggacaccgcgtatt
gccaatcgcttactaaaaagagtacgtgatatttcgcaggtgaaaggggaaacagaaatt
agttttgaaacatcaaggcaagctttaaaaatgctgcaggttgatgaatctggcttagat
catattgatcataagctgttaaaagaaattatagaaggttttaatggcggcccggtcggc
ttagatactatcgcagctacaattggggaagaatcgcagacgatagaagaagtatatgaa
ccttttctgcttcaattagggtttattcagcggactccaagaggaagaaaagttacccca
aaagcctatgaacattttggaataccaatgataaacggggaagaataa

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