Oceanobacillus jeddahense: NP439_12190
Help
Entry
NP439_12190 CDS
T08779
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
ojd
Oceanobacillus jeddahense
Pathway
ojd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ojd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NP439_12190 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ojd03400
]
NP439_12190 (ruvB)
Enzymes [BR:
ojd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NP439_12190 (ruvB)
DNA repair and recombination proteins [BR:
ojd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NP439_12190 (ruvB)
RecFOR pathway proteins
NP439_12190 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
TIP49
AAA_14
NB-ARC
nSTAND3
AAA_22
AAA_16
AAA_3
RNA_helicase
AAA_17
DUF815
AAA_18
Rad17
TsaE
AAA_28
ABC_tran
NTPase_1
IstB_IS21
NPHP3_N
Cytidylate_kin
AAA_24
AAA_25
Sigma54_activ_2
Resolvase
AAA_33
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
UUI05350
LinkDB
All DBs
Position
2484161..2485168
Genome browser
AA seq
335 aa
AA seq
DB search
MDERMIDGNLQDEDVSIEQSLRPLQLEDYIGQPKVKENLSIFIQAAKMREEPLDHVLLFG
PPGLGKTTLASIIANEMGVQFRSTSGPAIERAGDLAAILSSLEPGDVLFIDEVHRLPRSV
EEVLYPAMEDFFIDIVIGSGPSARSVRIDLPPFTLVGATTRSGLLSAPLRDRFGVLSRLE
YYDVADLRQIVMRTAEIFHMTISEDAAVEIASRSRGTPRIANRLLKRVRDISQVKGETEI
SFETSRQALKMLQVDESGLDHIDHKLLKEIIEGFNGGPVGLDTIAATIGEESQTIEEVYE
PFLLQLGFIQRTPRGRKVTPKAYEHFGIPMINGEE
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
ttggatgaacggatgattgacggtaacttgcaagatgaggatgtatcgatagagcaaagt
ttaagaccgctgcaactagaggattacattggtcaacccaaggtaaaagaaaatttaagt
atctttatccaagcagccaaaatgcgggaagaaccgcttgatcatgtattgctgttcggg
ccgccgggattgggtaaaacaacactggcttctattattgctaatgagatgggagttcaa
ttcaggtctacttctggtccggccattgagcgtgcaggagatttggcagcaatactttct
tcattggagcctggagacgtattatttattgatgaagtacatcgccttccacgatctgtg
gaagaagtgctgtatccggcaatggaagacttttttatagatatcgtaataggaagcgga
ccaagcgcccgtagtgtccgcattgatttgcctccgtttacactggtaggagcgactaca
cgatctggactgttaagtgcgccgttacgtgaccgatttggggtactcagccgcctggaa
tattacgatgtggcggacctgcgccaaatagtcatgcgtacagccgaaatatttcatatg
accatctcggaagatgctgctgtagaaattgccagcaggtccagagggacaccgcgtatt
gccaatcgcttactaaaaagagtacgtgatatttcgcaggtgaaaggggaaacagaaatt
agttttgaaacatcaaggcaagctttaaaaatgctgcaggttgatgaatctggcttagat
catattgatcataagctgttaaaagaaattatagaaggttttaatggcggcccggtcggc
ttagatactatcgcagctacaattggggaagaatcgcagacgatagaagaagtatatgaa
ccttttctgcttcaattagggtttattcagcggactccaagaggaagaaaagttacccca
aaagcctatgaacattttggaataccaatgataaacggggaagaataa
DBGET
integrated database retrieval system