Oceanobacillus jeddahense: NP439_12315
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Entry
NP439_12315 CDS
T08779
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ojd
Oceanobacillus jeddahense
Pathway
ojd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ojd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NP439_12315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ojd03400
]
NP439_12315
Enzymes [BR:
ojd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NP439_12315
DNA repair and recombination proteins [BR:
ojd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NP439_12315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
HHH_5
AAA_12
UvrD-helicase
UvrD_C
AAA
AAA_22
NPHP3_N
nSTAND3
DUF4926
AAA_7
AAA_16
AAA_28
RsgA_GTPase
AAA_14
TsaE
T2SSE
DnaB_C
NTPase_1
AAA_29
YajR_YAM
CbiA
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
UUI05372
LinkDB
All DBs
Position
2512260..2514596
Genome browser
AA seq
778 aa
AA seq
DB search
MGNQIETKEALPFVTGTIINTIFRNEAEHFSIVRIKITKTNLDYEDKEIIVKGYFDQLQD
QTAYCFYGSMEKHPRYGSQLKVQSYETILPTTKDGLVQYLSSDLFYGVGKKSALKIVEAL
GESAVSKIIDNPSVLDNVSGVSKETGKRLAERLRENQGFERVAVKLSEYGIGLKMAQVIY
QTYRDEALEVLEKDPYQYVFDIEGFGFKMADQIASGQGISHTHESRIGAGVIYILQQSIQ
AGHVYLPFEKCMEEVVHLLRLPNPDQNTVSEVIMQLNTKKQVIVMEERVYLPSLYYAEDN
FTASLKKILTKPIEDEVPLSELLKITGDIEEEESLSYGKEQFDAIVQAIHSKIMILTGGP
GTGKTTVITGIIQAFAKIHELSLNLSDYQKKDSFPFILTAPTGRAAKRMSESTGLPAVTI
HRLLGWNGMGSFEKDEHEPLSGKLLIVDEFSMVDTWLANHLFKAIPDTMQVILVGDEDQL
PSVGPGQVLTDLMKSDVLPVISLTDVYRQKEGSKIIQLAHQIKNTNCDKNALENARDFSF
ISCHDYQMVNVLTSIIDKAQKKGIDPSSIQILSPMYRSQAGIHAINESLQQLINPPGEKK
REIAFHDVVYRVGDRVIQLINQPEDGIFNGDIGEIVAIFKAEENVENEEQIVIAFEDKEV
IFIRKDYNNFTHAFCISIHKSQGSEFPIVILPVVYSHHRMLRKNLLYTAITRGKESLIIC
GEKEAFIKGVQTEDTNRRYTSLQEMLSIQLANQKAEKKEYETVEDIPEEELSPYDFMD
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaccagatagaaacaaaggaagcactgccttttgtaacgggaactatcataaat
accatttttcgtaatgaggcagagcatttctctatcgtccgaattaaaatcacaaaaaca
aaccttgattatgaagataaagaaatcattgtgaaagggtattttgatcaattacaagat
cagactgcctattgtttttatggatcaatggaaaagcatccccgctatggttcacaatta
aaagtacaatcctatgagacaatattgccaacaacaaaggatggtcttgttcaatacctg
tccagtgacttattttatggagtcggcaaaaaaagtgccttaaaaattgttgaagcgtta
ggagaaagcgcagtttcgaaaattattgataatccatctgttttagacaacgtttctggc
gtatcaaaagaaactggtaagagactggctgagcgcctcagggaaaatcaagggtttgaa
cgcgttgcagttaaattatcagaatatggaattggactgaaaatggctcaggttatttac
cagacctatcgcgatgaagcattagaagttctggagaaggatccatatcaatatgttttt
gatattgaaggttttggatttaaaatggcagatcaaatagcctctgggcaaggtatttca
catacccatgaaagccggattggtgcaggagttatttatatccttcaacaaagtattcag
gcaggacatgtttatcttccgtttgaaaaatgtatggaagaggtggttcatttactgcgt
cttcccaatcccgatcagaatactgtttccgaagttattatgcaattgaatacaaagaaa
caggtcattgttatggaagaacgtgtttatttaccttctttatattatgctgaggataat
tttacggctagcttaaaaaaaattcttacgaaaccgatagaggatgaagtgcctttgtcg
gagcttttgaaaataacgggtgatattgaggaagaagagtcattaagttatggaaaagag
caatttgatgctatcgttcaagcgatccactcgaaaattatgattttaacgggtggtcca
gggactggcaaaacgacagtgatcacgggaattatccaagcatttgccaaaatccatgag
ctttctttaaatctatcggattatcagaaaaaagatagctttccgtttattctaacagcc
cctaccggacgtgctgcaaaaagaatgtccgaatctactggtttgccggcagttacaatt
caccgattactcggctggaatggaatgggcagttttgaaaaagatgagcacgaaccttta
tccggaaagctgctgattgttgatgaattttctatggtagatacatggttagcaaaccat
ttatttaaagctattccggataccatgcaggttatcctggttggagatgaagatcagctt
ccatcagtgggcccgggtcaagttttaaccgatctgatgaaaagtgacgtgttgccagtt
atctctttaacggatgtatatcgtcaaaaagaaggttctaaaattattcagcttgcccat
caaattaaaaatacgaattgtgataaaaatgcgttggagaatgcacgtgatttcagtttt
atttcctgccatgattatcagatggtcaacgttttgacatcgattattgataaggcgcaa
aaaaaaggaattgatccatcttctatccagatcctatcccccatgtatcgttcgcaagca
ggaattcatgcgattaatgaatcgttgcagcaattaattaatcctcctggtgaaaagaaa
cgggagattgcttttcacgatgttgtttatcgcgtcggagaccgtgtgattcaattaatt
aatcaaccggaagacgggatatttaatggagatattggagaaatagttgctatttttaag
gctgaggaaaatgttgaaaatgaggaacaaattgtaatagcttttgaagataaagaagtt
atctttattcgaaaagattataataacttcacacatgcattctgtatttccattcataaa
tcacaaggaagcgaatttccaattgttattctgccggttgtttattcccatcatcgcatg
ctgcgaaaaaacctcctatatacggcaattacaagaggaaaggaatcgttgattatttgc
ggtgaaaaagaagcatttattaaaggagttcaaaccgaagatacgaaccggagatacacc
tcattgcaggaaatgctgagtattcaactagccaatcagaaagcagagaaaaaagaatat
gagacggtagaggatataccagaggaagaattatctccctatgattttatggattaa
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