Oceanobacillus jeddahense: NP439_15750
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Entry
NP439_15750 CDS
T08779
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ojd
Oceanobacillus jeddahense
Brite
KEGG Orthology (KO) [BR:
ojd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ojd03016
]
NP439_15750 (truB)
Enzymes [BR:
ojd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NP439_15750 (truB)
Transfer RNA biogenesis [BR:
ojd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NP439_15750 (truB)
Prokaryotic type
NP439_15750 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
UUI01501
LinkDB
All DBs
Position
complement(3197278..3198165)
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AA seq
295 aa
AA seq
DB search
MNGILPLWKPKGMTSFDCVAKCRRYFNTKKVGHTGTLDPEVEGVLPICLGNATKVVPFLT
DTKKVYLGTVALGTATETEDATGSVIEEKKVVEMPTKTEIEAVLETFKGAITQVPPMYSA
VKVNGKKLYEYARANEEVERPSREVFIYDLQLLAIDESKNSFDLYVECSKGTYIRTLCVD
TGKELGYPAHMLQLERIKTGSFSKKNTVTFAMIEEAAAKNEQAQLLRPISEGLSHLVHQD
VDDALKLRIKNGQKLAVTEAPVTNNPFVFTNNEEVLAIYGKHPEQPGQIKPLRVF
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgaatggtatcttaccgctttggaagccgaaagggatgacttcttttgattgtgtagct
aaatgccggcgttattttaatacaaaaaaagtagggcatacaggcacgttagatccggaa
gttgagggagttttgcctatttgtcttggcaatgccaccaaggttgttcccttcctgacg
gatacgaaaaaagtatatctcggtacggttgcgttaggaacagctacggaaactgaagat
gctacagggagtgttattgaagaaaaaaaagtggttgaaatgcctacaaaaacagagata
gaagctgttttagaaacgtttaaaggggcgattactcaagttccaccaatgtattctgct
gtgaaggtaaatgggaagaagctttatgagtatgcgagagcaaatgaagaagtggaaagg
ccaagcagggaagtttttatttatgatttacagcttttagcgatagatgaaagcaaaaat
tcttttgacttatacgtagagtgctcaaaagggacgtatattagaacattatgtgtggat
actggtaaagaattaggatacccagcacatatgcttcaattagaacgtataaaaaccggt
agtttttccaagaaaaatacggttacttttgctatgatagaagaggcagctgcaaagaat
gagcaagcgcagctattacggccaatttcagaaggattaagtcatttagtgcatcaagat
gtagacgatgcattaaaactccgcatcaaaaatggacagaaattagctgttaccgaagct
ccagtgacaaataatccgtttgtatttacaaacaacgaagaagtcttagcaatttatgga
aagcatccagaacaaccaggtcaaattaaaccattaagggtattctaa
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