Oceanobacillus jeddahense: NP439_15790 Help Entry NP439_15790       CDS       T08779                                  Name (GenBank) PolC-type DNA polymerase III   KO K03763   DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] Organism ojd  Oceanobacillus jeddahense Pathway ojd03030   DNA replication ojd03430   Mismatch repair ojd03440   Homologous recombination Brite KEGG Orthology (KO) [BR:ojd00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     NP439_15790    03430 Mismatch repair     NP439_15790    03440 Homologous recombination     NP439_15790  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:ojd03032]     NP439_15790    03400 DNA repair and recombination proteins [BR:ojd03400]     NP439_15790 Enzymes [BR:ojd01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.7  DNA-directed DNA polymerase      NP439_15790 DNA replication proteins [BR:ojd03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     DNA polymerase III holoenzyme      NP439_15790 DNA repair and recombination proteins [BR:ojd03400]  Prokaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     DNA polymerase III holoenzyme      NP439_15790 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_pol3_alpha RNase_T PHP DNA_pol3_finger DNA_pol3_a_NII DNA_pol3_a_NI HHH_6 tRNA_anti-codon HHH_3 DNA_pol_A_exo1 Rv2179c-like DEDDh_C RNase_H_2 DUF1409 DNA_ligase_ZBD zf-ribbon_3 Zn-ribbon_8 Motif Other DBs NCBI-ProteinID:  UUI01509 LinkDB All DBs Position complement(3204218..3208507) Genome browser AA seq 1429 aa AA seqDB search MSISKQEKMRLLLEQIQLSETSVQTYFASSYLEKVEVYKQEKKWHFYIHLEDVLPFDEYL YLYQSLQKSFSSIAEKVELTLHTDNKQCNEKDIGVYWKHFLATTNISPAYQEMVMQQTPR VVENKIMLTSRNETESNILKKRLEPAFSQFCYQIGSRPYSIDLEVKEDQNEMQAFQDNKA KEDQALVQKTVQEKEKRDKEKDTPVSQPLAIGYKIQDEPTEMNQILEEERRITVQGYVFD AEIRELRSGRSLLIIKATDYTDSLQIKMFSKGDEDVNKFQSVKKGMWVKARGSIQTDMYT NELAMMAKDIHEVQVREKQDEAPEDEKRAELHAHTTMSQMDAVVSPDALVEQAAKWGHPA VAITDHAGVQGFPDAYYAGKKHGIKVLYGVEANLVDDGVPIAYNESDRLLKDANYIVFDV ETTGLSAVYDTIIELAAVKVHNGEIIDRFESFANPHHPLSETTTNLTGITDDMVKDAPEV SDVLKDFHAWMGEDILVAHNASFDMGFLNQGFKRIGYEKAANPVIDTLELARFLITELKN HRLNTLCKHLGIELTQHHRAIYDAEATGYLLWNLVQKLIEREITNHQDLNNHMGENNAYQ RSRPFHCTILAQTQEGLKNLYKIVSHAHIDYFYREPRLPRSVLKKYRKGLLIGTACDKGE VFETMMQKSEEEAEQVAEFYDYIEVQPPKNYVHLVEKDLVQNEAQVVDILRKLVNLGEQM NKPVTATGNVHYLQDFDKQYRQILIASQAGNPLNRQTLPDTPFRTTSEMLEAFSFLGKEK AKEIVIQNTQQLADSIEDISPIQDGLFTPNIEGAEQDMRDLCYDMAKKVYGEPIPEIVSK RLETELESIIGNGFAVIYLISHKLVKKSLDDGYLVGSRGSVGSSFVATMTEITEVNPLPP HYVCPSCKHSEFFTDGSVASGFDLEDKNCPECGTALVKDGQDIPFETFLGFKGDKVPDID LNFSGDYQPRAHNYTKDLFGIDNVYRAGTIGTVAEKTAYGYVKGYASDHQLVYKNAEIDR LVQGCTGVKRTTGQHPGGIIVVPDDKEIYDFTPIQFPADDRNSEWRTTHFDFHSIHDNLL KLDILGHDDPTVIRMLQDLSGIDPKTIPTDDEEVMKIFGGTESLGVTPEQIQCKTGTLGV PEFGTKFVRQMLEDTKPKTFAELLIISGLSHGTDVWLGNAQELINDGICQLPDVIGCRDD IMVYLMHKGLEPSLAFNIMEFVRKGKGLKDEWIEEMKKNNVPDWYIESCKKIKYMFPKAH AAAYVLMAVRIAYFKVHHPILFYAAYFTVRADDFELDTMIKGSDAIRKRMEEINYKGNDA SPKEKNLLTVLEISLEMCERGLSFKKVDLYKSSATEFIVDGDSLLPPFNAVDGLGTNAAL NIVKAREEGEFLSKEDLRERSKISKTVLEYLDNHGCLEGMEEKNQLSLF NT seq 4290 nt NT seq  +upstreamnt  +downstreamnt atgagtatttccaagcaagaaaaaatgagattattacttgagcaaattcaactgtctgaa acatcggttcaaacgtattttgcttcaagttatttagaaaaagtagaagtctataagcaa gaaaaaaaatggcatttctatattcatctggaagatgttcttccttttgatgaatattta tatttataccaatccttgcaaaaaagcttttcctcgattgccgagaaggtagagttgaca ttacatacagataataaacaatgtaatgaaaaagatattggcgtttattggaagcatttt ttagcaacaaccaacatttctccagcatatcaggagatggtgatgcagcagacaccccgg gttgtggaaaataaaattatgttaacttcaagaaatgaaacggaatctaatattttgaaa aaaagacttgagccagcattcagccaattttgctatcaaattggatcaagaccttattct attgatttagaagtaaaggaagatcaaaacgaaatgcaagcgttccaggataataaagcg aaggaagatcaggcgcttgtccaaaaaacagttcaagaaaaagaaaaacgggataaagaa aaagatacacctgttagtcagccgctggcaattggttataaaattcaagatgaaccgacc gagatgaatcaaattttagaagaagaaagaagaatcactgtacaaggatatgtgtttgat gcggagatcagagagttgagatccggacgcagtcttttaattattaaagcaacagactat acagattctctacaaattaaaatgttctctaaaggagatgaagacgtcaataagtttcaa tctgttaaaaaagggatgtgggtcaaagctcgcggcagcattcaaacagatatgtatacg aatgaactggcaatgatggcaaaggatattcatgaagtgcaagtaagagagaagcaagat gaagcgccggaggatgaaaaaagagcagagctgcacgcacatacgacaatgagtcaaatg gatgcagtggtttctccggatgctttggtggaacaagctgctaaatgggggcatcctgct gtagccataacagaccatgctggtgtgcaaggtttccctgacgcttactatgcagggaaa aaacatggtatcaaagtactctatggtgtagaagcgaatcttgtcgatgacggtgttcca attgcttacaatgaaagtgaccggctactaaaagatgcgaattacattgtgtttgacgtg gaaacaaccgggctttctgcagtatacgatacaatcattgaattagctgctgtaaaggta cacaatggtgagattattgatcgatttgagtcttttgctaatccgcatcacccgctgtct gagacaacaacaaatttaaccggtattaccgatgatatggtcaaggatgctccagaagta agtgatgttctaaaagattttcatgcctggatgggggaagatattttagtagcgcataat gcaagtttcgatatgggattcttaaatcaaggctttaaacgaattggctatgaaaaagcg gctaatccagtcattgatacattagaattagcaagatttttaattacagaactcaaaaat catcgtttaaatacattatgtaagcatttagggattgaattgacacagcatcaccgtgcc atttatgacgcagaagctacaggctacctattgtggaacctggtccagaaattaatagaa agagaaattaccaaccatcaggacttgaataatcatatgggtgaaaataacgcttatcag cgctccagaccttttcactgtaccatcttagcgcagacgcaggaaggattgaaaaatcta tataagattgtgtcccatgcacatattgattatttctatcgtgagccgagactgccgagg tctgtcttgaaaaaatatcgtaaaggactattaattgggactgcttgtgataaaggagaa gtctttgaaacgatgatgcaaaaatcggaggaagaagcagagcaggttgctgaattctac gactatattgaagtacagccgcctaaaaactatgtccatttagtagaaaaggatttagta caaaacgaggcgcaagtagtagatatattacggaagcttgtaaacctgggagaacagatg aataagccggtaacagcgactggaaatgtacactatctgcaagattttgataaacagtat cgtcaaatattaattgcctcccaagctggtaatccattgaataggcaaacattgccggac acaccttttagaacaacgagtgagatgcttgaggctttctcttttttaggaaaagaaaaa gcaaaagaaatcgttattcaaaatacacagcaattggctgacagtatcgaggatatctca ccaattcaagatggattgtttacaccaaatattgaaggcgcggagcaggatatgcgtgat ttatgttacgatatggcaaaaaaagtatatggcgagccaataccagaaattgttagcaaa cgtctggaaacggaattagaaagtattatcggaaatggatttgcggtaatttatttaatt tcccataagctggttaaaaaatcattggatgatggctaccttgtaggttcccggggttct gtcggatcttccttcgttgctacgatgactgaaattacagaagttaacccgcttcctcca cattatgtttgtccaagctgcaaacactctgagttctttacagatggttctgtagcgagc ggttttgatttggaagataaaaattgtccggaatgcggtacagcacttgtaaaggatgga caggatattccttttgaaacgttcttaggctttaaaggggataaggttccggatattgac ttgaacttctcaggagattatcagccgcgtgcccataactatacaaaggatttgtttggg atcgacaatgtataccgggcgggaactataggaactgtagctgaaaaaacagcttatggt tatgtgaagggttatgcttccgaccatcagcttgtttataaaaatgcagagattgaccgt cttgtgcaaggctgtactggggttaaaagaacaactggacagcatcccggggggattatt gttgttcccgatgataaagaaatttatgattttacaccaatccaattcccggcagatgac cggaatagtgaatggcggacaacgcattttgatttccattcgattcacgataatctgctg aagttggatatacttggacacgatgatcccaccgttatccgtatgctgcaggatttaagc gggatcgatcctaagaccataccgacagatgatgaagaggttatgaaaatctttggtgga acagaatcgttaggtgttactccggagcagatccagtgtaaaacaggaacgttgggagta cctgaattcggtacaaaatttgtccggcagatgctggaagatacaaagccgaagacattt gcagaattgttaattatatctggtttgtctcatggtacagacgtatggcttggaaacgca caggagcttattaatgatggcatctgtcagcttccggacgttatcggctgtcgtgatgat attatggtgtatttaatgcataaagggttagaaccttccttagcatttaatatcatggag tttgtccgtaaaggtaaagggttgaaggatgaatggatcgaggaaatgaagaaaaataat gtacctgactggtatattgaatcttgtaagaaaatcaaatacatgttcccgaaagcccat gcggcagcctatgttttaatggccgtacggattgcttatttcaaagtacatcatccgatt cttttttatgcggcatattttaccgtccgagcagatgattttgaattagatacaatgatt aaaggctcagatgctatccgtaaacgtatggaagaaattaattataaaggcaatgatgca tcaccaaaagaaaaaaacttgctcacagtgttagaaatttctttagaaatgtgtgaacgg ggcctgtcctttaaaaaagtagatttatataaatcaagcgcaactgaatttatcgttgac ggtgattctttactaccgccttttaatgcagtagatggattaggtacgaatgctgcttta aacattgtgaaagcacgtgaagaaggcgaatttttatccaaagaagatttaagagaaaga agtaagatctctaaaacggtactagagtatttagataatcatggatgtttagaaggaatg gaagagaaaaatcaactttccttattttag

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