Oceanobacillus jeddahense: NP439_15840
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Entry
NP439_15840 CDS
T08779
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
ojd
Oceanobacillus jeddahense
Pathway
ojd02020
Two-component system
ojd02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ojd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NP439_15840
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NP439_15840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ojd03021
]
NP439_15840
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ojd02035
]
NP439_15840
Transcription machinery [BR:
ojd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NP439_15840
Bacterial motility proteins [BR:
ojd02035
]
Flagellar system
Flagellar assembly proteins
Stator
NP439_15840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
DnaD_N
F_actin_cap_B
HTH_23
Rio2_N
UPF0122
Motif
Other DBs
NCBI-ProteinID:
UUI01518
UniProt:
A0ABY5JMJ4
LinkDB
All DBs
Position
complement(3219630..3220406)
Genome browser
AA seq
258 aa
AA seq
DB search
MNALDPSQEQVLWKNWMTNQDNESANILIENYMYLVSFHTERIVSQLPNSVDREEIRSYG
LLGLYDALHKFELKRDLKFDTYASFRIKGSIIDGLRKEDWLPRSIREKTKKVEQASELFE
QKHQRVAQPEDIAEITGMSIQEVETTLRDMVLSNMLSIEDKPKGHENDLKEGIGYNVSDK
PELSPEARLIQEEWKGELIEGIKSLNEKEQLVISLFYQEELTFTEIGQVLELTTSRISQI
HKRSIVKLRSTLQKITQI
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
ttgaacgcattagacccttcacaagaacaagtgttatggaaaaattggatgaccaatcaa
gataatgaatcagcaaatatacttattgagaactacatgtatcttgtttcctttcacacg
gaaagaattgtaagtcaattacctaatagtgttgatcgtgaagaaatacgcagctatggt
ttgctggggctttatgacgcattgcataagttcgagttgaaacgtgatttgaaatttgat
acatatgcttcatttcgaattaaaggttctattatagatggtctaagaaaagaagactgg
ctgccccgttccatccgtgagaaaacaaaaaaagtggagcaggcaagtgaactttttgag
caaaaacatcaacgtgtagcgcagccagaggacatagctgagataacaggaatgtccatt
caagaagtagaaacaacattacgagatatggttttaagtaacatgctgtctattgaagat
aaaccaaaagggcatgagaatgatttaaaagaaggtattggctacaatgtctcagataaa
ccggagcttagtccggaagcccggcttatccaagaggagtggaagggtgaattaatagaa
ggtatcaagtcattaaatgaaaaagaacagcttgttattagtcttttctatcaggaagaa
ttaacctttacagagattggacaggtacttgaattaacgacttcccgaatttcacagatc
cataagcgaagtattgttaaattacgttcaaccctgcaaaaaattacacagatttaa
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