Oceanobacillus jeddahense: NP439_16025
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Entry
NP439_16025 CDS
T08779
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
ojd
Oceanobacillus jeddahense
Pathway
ojd00020
Citrate cycle (TCA cycle)
ojd00640
Propanoate metabolism
ojd00660
C5-Branched dibasic acid metabolism
ojd00720
Other carbon fixation pathways
ojd01100
Metabolic pathways
ojd01110
Biosynthesis of secondary metabolites
ojd01120
Microbial metabolism in diverse environments
ojd01200
Carbon metabolism
Module
ojd_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ojd_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
ojd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
NP439_16025 (sucD)
00640 Propanoate metabolism
NP439_16025 (sucD)
00660 C5-Branched dibasic acid metabolism
NP439_16025 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
NP439_16025 (sucD)
Enzymes [BR:
ojd01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
NP439_16025 (sucD)
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GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
UUI01552
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Position
complement(3254153..3255055)
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AA seq
300 aa
AA seq
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MSVYINKDTKVIVQGITGGTARFHTKQMLEYGTKIVGGVTPKKAGTEVEGVPVFNTVEDA
VKATGATASVIYVPAPFAADAIIEATDAELDLVICITEHIPVMDMVKVKRYMEGKKTRLV
GPNCPGVITADETKIGIMPGYIHKKGHIGVVSRSGTLTYEAVHQLSEAGYGQTTAVGIGG
DPVNGTNFIDVLDEFNKDPETEAVIMIGEIGGTAEEEAAEWVKANMTKPVVGFIGGATAP
PGKRMGHAGAIISGGKGTAEEKIRIMESCGIKVASTPAVMGETMIEALKEKGLEEKCKTH
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtttatattaataaagatacaaaagtaatagtccaaggaattacaggtggaact
gcacgtttccatacaaaacaaatgcttgaatatggtacaaaaattgtaggtggggttaca
ccgaaaaaagcaggtacagaagtagaaggagttcctgtatttaatacagttgaagatgct
gtgaaagctactggagccactgcttctgttatctatgtgccggcaccttttgcagctgat
gctattattgaagcaaccgatgcagagcttgatttagtaatctgtattacagaacatatt
ccggtaatggatatggtgaaggtaaaacgttatatggaaggtaagaaaacgcgtcttgtt
gggccaaactgtcctggtgttattacagcggacgaaacaaaaattgggattatgcccggg
tatatccataaaaaaggacatataggcgtggtatcccgttcgggtactttaacctatgaa
gctgttcatcagttatccgaagccggttatggacaaaccacagctgtcggtattggcggc
gacccggtcaatggaacgaactttattgatgtattagatgaatttaataaagaccctgaa
accgaggctgttatcatgattggtgaaatcggcggtacagcagaagaagaagctgcggaa
tgggtgaaagcgaacatgacaaagccggttgtcggatttatcggcggtgctacagcacct
ccaggaaaacgcatgggacatgctggtgccatcatctccggaggaaaagggacagctgaa
gaaaaaatccgcattatggagtcttgcggtattaaagtagcttctactcctgccgttatg
ggagaaacaatgattgaagcattaaaagaaaaaggtttagaggaaaagtgtaaaacacat
taa
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