Oceanobacillus jeddahense: NP439_18820
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Entry
NP439_18820 CDS
T08779
Symbol
rapZ
Name
(GenBank) RNase adapter RapZ
KO
K06958
RNase adapter protein RapZ
Organism
ojd
Oceanobacillus jeddahense
Brite
KEGG Orthology (KO) [BR:
ojd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ojd03019
]
NP439_18820 (rapZ)
Messenger RNA biogenesis [BR:
ojd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
NP439_18820 (rapZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_33
AAA_22
AAA_18
Myosin_head
AAA_16
nSTAND3
AAA_28
CoaE
Motif
Other DBs
NCBI-ProteinID:
UUI02076
LinkDB
All DBs
Position
complement(3867229..3868116)
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AA seq
295 aa
AA seq
DB search
MNQEKETKLVIITGMSGAGKTVAVQSFEDLGYYCVDNLPPALLPKFLELMKDASNTIQKV
ALVMDLRGREFFDSLYKALDAISHTPWIQSHILFLDAVDETLVTRYKETRRSHPLAVGGL
PLNGIHQERIIIDELRGRSQRIIDTSNLKPRDLREKILQLYKEDKQEVFSAHFVSFGFKY
GIPIDADLVFDVRFLPNPHYVSALQPLTGLTQEVSSYVFKWSDTQLFTEKLNDLFRFMLP
QYKKEGKSQLVIAIGCTGGQHRSVALAEYFSKQFSNDYITHVSHRDIEKRKAKSS
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcaggaaaaagaaacaaagctcgttattattacggggatgtcaggagctgggaaa
acagttgcggtacaaagctttgaagatttaggttattattgtgtagataatttacctcct
gcgcttcttcccaagtttttagaattaatgaaggatgcttcgaatacgattcaaaaagta
gcgcttgtcatggatttacgaggaagagagttttttgattccttatacaaggcattagac
gccattagtcatacaccatggattcaaagccatatcctatttttagatgctgtagatgaa
accttggtgacaagatataaagagactaggcgctctcatccattagctgttggtggtctt
cctttaaatggaatccatcaagaaagaattattattgatgaactacgtggccgttcgcaa
agaattattgatacctccaaccttaagccaagggatttacgggaaaaaattcttcaattg
tataaggaagacaaacaagaagtattttctgctcattttgtttcctttggttttaaatat
ggaattccgattgatgctgatctagtatttgacgtccgttttttaccaaacccgcattat
gtatctgcacttcaacccttaaccggtttaactcaggaagtttcttcttatgtatttaaa
tggtcagatacacagctgtttactgagaaattaaatgatttattccgctttatgctgcct
caatataaaaaagaaggaaaatcacagttagttattgcgattggctgtacgggaggacaa
caccgttctgtcgcgttagctgagtatttttcaaaacaattcagcaacgactatatcact
catgtcagccatagggacattgagaagagaaaggcgaagtcatcatga
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