Oceanobacillus jeddahense: NP439_19130
Help
Entry
NP439_19130 CDS
T08779
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
ojd
Oceanobacillus jeddahense
Pathway
ojd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ojd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NP439_19130 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ojd03400
]
NP439_19130 (uvrA)
DNA repair and recombination proteins [BR:
ojd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NP439_19130 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NP439_19130 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
AAA_16
RsgA_GTPase
nSTAND3
nSTAND1
AAA_21
AAA_33
ATPase_2
DnaJ_CXXCXGXG
AAA_22
AAA_23
NACHT
nSTAND_NTPase5
AAA_25
Viral_helicase1
ATPase
cobW
SLFN-g3_helicase
NB-ARC
Septin
Motif
Other DBs
NCBI-ProteinID:
UUI02134
UniProt:
A0ABY5JQS0
LinkDB
All DBs
Position
complement(3927423..3930296)
Genome browser
AA seq
957 aa
AA seq
DB search
MPSKSIKIQGARAHNLKNIDVEIPKNKLVVLTGLSGSGKSSLAFDTVYAEGQRRYVESLS
AYARQFLGQMDKPDVDVIEGLSPAISIDQKTTSKNPRSTVGTVTEIYDYLRLLFARVGKP
TCPNHGIEISSQTVQQMVDRVLEYPERTKMQILAPVVSGRKGEHVKVLEDLKKQGYVRIR
VNGDMMEVTDDINLEKNKKHSIEVVIDRIVVKSGVESRLSDSLEAALKLGDGNAIVDVID
DEELLFSENHACPICGFSIGKLEPRLFSFNSPFGACTSCDGLGTKLEVDIELVIPDWDKT
LNEHAIAPWEPISSQYYPQLLKSVCDHYAIPMDIPVKDIPKEQMDKILYGSGKEKIHFYY
ENDFGSARTKDVAFEGVLKNVERRYRETSSDFIRETLEKYMAQKNCPTCKGNRLNKEALA
VLIDGKHISHVTNFSILESKDFFNQLELSDKDRQIARLILREIDNRLSFLNNVGLDYLTL
SRSAGTLSGGEAQRIRLATQIGSALTGVLYVLDEPSIGLHQRDNDRLIETLKQMRDLDNT
LIVVEHDEDTMLAADWLIDIGPGAGEHGGEIVASDTPENVKTNEHSLTGRYLSGKEFIPV
PVKRKKADKRKIKVTGASENNLKNVSAEIPIGLMTVVTGVSGSGKSTLVNEIVYKSLAKE
LYKGKVKPGKYRSIKGIEHIEKVIDIDQSPIGRTPRSNPATYTGVFDDIRDVFAQTNEAK
VRGYKKGRFSFNVKGGRCEACRGDGIIKIEMHFLPDVYVPCEVCDGARYNRETLEVKYKG
KSISDVLEMRIEEALEFFSAIPKIKRKLQTIYDVGLGYIKLGQPATTLSGGEAQRVKLAS
ELHKRSNGKTFYILDEPTTGLHSADIRRLLDVLQRLVDNGDSVLIIEHNLDVIKSADHII
DLGPEGGDRGGQIIAKGTPEKIAEQADVSYTGKYLGPVLERDKARMNDMLKEKVSSK
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgccaagcaaatctataaaaattcaaggtgccagagcacataatttaaaaaatatagat
gttgaaattcctaaaaataaattagttgttcttacagggctttctggttccgggaaatca
tccctcgcctttgatacggtgtatgcagaaggacaacgcagatatgtcgaatccttatct
gcctatgccagacaatttttagggcaaatggataagccggatgtcgatgtgattgaaggg
ttatcgccggccatttcaattgatcaaaaaacaacgagtaaaaatccaagatccactgtg
ggaaccgtaacagagatttatgattatctgcgtttattatttgctcgcgtagggaaacca
acctgccccaatcatggtattgaaatcagttcacaaactgtccagcagatggttgaccgg
gtgctggagtacccggaaagaacaaaaatgcaaattttagcccctgtcgtatcaggcaga
aaaggagaacacgttaaagtattagaagacttgaaaaaacaaggttatgtacgtatccgt
gtgaatggagacatgatggaggttacggacgatattaacctggaaaaaaataaaaaacac
tcgatcgaggtggttatcgatcgtattgttgttaaaagtggtgtagaaagccgcttgagt
gattcgttggaagcagcgctaaaattaggagacgggaatgcgattgtcgatgtgattgac
gatgaagaactactgttcagtgaaaatcatgcttgtccgatttgcggcttttccatcggg
aaattagagccccgtttattctcgtttaacagtccgtttggtgcttgtacaagctgtgat
ggattaggaacgaagctggaagttgatattgaactggttattccggattgggataagacg
ttaaatgaacatgcgattgccccttgggaaccaatcagttcacagtattatccgcagctt
ttgaaaagcgtctgcgatcattatgctattccaatggatattccggtgaaagatattcct
aaggaacaaatggacaaaatattatatggaagcggaaaagaaaaaattcatttttactat
gagaatgattttggcagcgcacgtacaaaagatgttgcttttgaaggtgttctaaagaat
gtggaacgcagatatagagaaacttcttctgattttatacgtgaaacattagaaaaatat
atggcacagaaaaattgcccgacttgtaaaggaaaccgtctaaacaaagaagcacttgct
gtattaattgacggaaaacatatcagccatgtgacgaatttttccattctggaatccaag
gatttctttaaccagcttgaattaagtgacaaagaccgtcagatcgcacgcttgatttta
agagagattgataatcggctatcctttttaaataatgtcggtttggactatctgacgcta
tcccgttcggcaggaacgctttccggcggagaggcacagcggattcgtctggcgacacaa
atcggatctgcgttaacaggtgtgctatatgtgctggatgaaccttctattggactgcat
cagcgcgataatgaccgcctgattgaaacgctcaagcagatgcgtgatctggataatacg
ttaattgttgtcgagcatgatgaagacacgatgcttgcagcggattggctgattgatatt
ggtcccggtgccggggagcatggcggagagatcgttgccagtgatacaccggagaatgtg
aaaacaaacgaacattccttgaccgggcgttatttatccggaaaagaatttatccctgta
ccggtaaaacgtaaaaaagcggataagcgcaaaataaaagttaccggcgcatcggaaaat
aatttgaaaaacgtatcggctgaaattccaatcggtttgatgaccgttgtcacaggtgtt
tccggatccggtaaaagtacgctggtgaatgagattgtctacaaatccttagcaaaagaa
ttatataaaggaaaagtaaaacccgggaaatatcgaagcattaaagggatcgagcatatt
gaaaaagtgattgatattgaccagtctccaataggaagaacaccacgttccaatccggct
acctatacgggtgtatttgacgatattcgtgatgtatttgcacagacaaatgaagcgaaa
gtacggggctataaaaaaggtcgcttcagctttaatgtgaagggcggccgctgtgaagcc
tgccgtggagatggcattatcaagattgaaatgcattttctacccgatgtgtatgtgcct
tgtgaggtatgtgacggagcacgctataaccgggaaaccctggaagtaaaatataaaggc
aaaagtatatctgatgttttggagatgcgtattgaagaagcgctggagtttttttccgct
attccaaaaattaaacggaagctgcaaaccatctatgatgttggcttaggatatattaag
ttaggtcagccggcaacaaccttatccggcggggaagcacagcgtgtgaaattagcgagt
gaactgcataaacgttcgaacggaaagacgttttatattctggatgagccgacaactgga
cttcattctgccgatattcgccgtttgctggacgtcctgcagcgacttgtagataatgga
gattctgttttaattatcgagcataacttagatgtgattaaaagtgcagaccatattatt
gatttaggtccagaaggcggagaccgcggcggccagattattgcgaagggaacgccggag
aaaatcgccgaacaggcagatgtttcttatacagggaaataccttgggcctgtgttagag
cgggataaagcacgtatgaatgacatgctgaaagagaaagtcagcagtaaataa
DBGET
integrated database retrieval system
