Oncorhynchus keta (chum salmon): 118357460
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Entry
118357460 CDS
T09424
Name
(RefSeq) neurexin-1a-like isoform X11
KO
K07377
neurexin
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
118357460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118357460
Membrane trafficking [BR:
oke04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
118357460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
118357460
NCBI-ProteinID:
XP_035590460
LinkDB
All DBs
Position
24:complement(35931285..36032878)
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AA seq
1479 aa
AA seq
DB search
MCLRVCVMAVCVWAAAPLLCVWLCLCSLGGSRGEVLEFGGVSGQWGRFPVWNACCESILS
FSVRTHSEDGLLLYLDDEGFCDFLELLLLRGKLRLRFSIFCAEPAEVSSGVAVSDGHWHV
VRVKRDWRNTSLEVDGRMEGWAEVKSKRRDMTVFSHTFMGGVSPELHASPLRLTSPGVRD
HAPFAGWLTSVTINGSAVVMEGSEGVTMGGDGCGPDHVCQNGGVCSVVEQKNVCDCTDTG
YKGNDCSEAREDYLATFKGSEYFCYDLSPSPIQSSSDEITLSFKTLQRNGLMLHTGKSAD
YVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLRQHSGIGHAMVTI
SVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVVYKNNDVR
LELSRLAKQGDAKMKVSGMVAFKCESVATLDPVTFDTPESFVALSKWSAKKAGSISFDFR
TTEPNGLMLFSHGKPRQQQRKDPRTPPTLKVDFFAIEMLDGHLYLLLDMGSGTTKTKAID
RKVNDGEWYHVDFQRDGRSGTISVNSQRTAYTAPGDSEILDLDDTLYLGGLPEDRQGLIF
PTEVWTALLNYGYVGCVRDLFVDGQSKDIRRLAEVQRAVGVKPSCSREPPKQCLSNPCQH
SATCREGWNRYVCDCSGTGYLGRACERDATILSYDGSKFMKVQLPVAMHTEAEDVSLRFR
SQRAYGVLMATTSRNSADTLRLELDGGRVRLTVNLDCIRINCTASKGPETIFAGVGLNDN
EWHTVRVVRRGKSLKLTVDDLQPVEGQMAGDHTQLEFHNVETGIVTEKRFMPAVPSNFIG
HLQGLTLNGMPYIDLCKNGDIDYCELNAVIGYKSIVADPVTFRSRSSYVTLPTLQAYYSM
HLFLQFKTTSPDGLVLYNRGDGNDFIVVELVKGYLHYVSDLGNGAHLIKGNSNSPLNDNH
WHNVLISRDTNNLHTVKIDTKVTTQTTMGAKNLDLKGDLYVGGVAKEMYRDLPKLVHSRE
GFQGCLATVDLNGRLPDLLADALATTGQVERGCEGTHTHTGPSTTCQEDSCSNQGVCLQQ
WEGFSCDCSMTSFGGPLCNDAGTTYIFGRDGGVIVYTWPPNERPSTRADRLALGFSTQQK
HATLLRVDSASGLGDYLQLQIDKGNIRVVFNVGTDDINIEETAKSVNDGKYHIVRFTRSG
GNATLQLDDLPIIERYPSGNIDNERLAIARQRIPYRLGRVVDDWLFDKGRQLTIFNSQTT
VTVGRGKEAGQFQGQMAGLYYNGLKILNMAAEGHAHIRLEGSTRLVGDMPSSITPQSSAA
AGANRSDPAANAGDITTTTATNRKQGGGTTQQSTDDLLVASAECPSDDEDIDPCDPSSAA
HPPLPEVKPFPGTSEGVRESSSTTGMVVGIVAAAALCILILLYAMYKYRNRDEGSYHVDE
SRNYISNSATQPNGSTKDKPLGIAKISKNKKNKDKEYYV
NT seq
4440 nt
NT seq
+upstream
nt +downstream
nt
atgtgtttgcgcgtgtgtgtgatggcggtgtgtgtgtgggccgcggcccccctgctgtgt
gtctggctgtgcctctgtagccttgggggatccagaggggaggtgctagagtttggtggg
gtgtcgggacagtggggacggttcccggtgtggaacgcgtgctgcgagagcatcctgtca
ttcagcgttagaactcacagtgaggacggactgctgctttaccttgacgacgaaggattc
tgcgacttcctggaactattgttgctacgcgggaaactccgcctacgcttctccatcttc
tgcgccgagccggctgaggtgagttccggggtcgccgtgagtgacggacactggcatgtg
gttcgtgtgaaacgggactggaggaacacaagccttgaggtggatggaaggatggaggga
tgggcagaggtgaagagcaaacggagagacatgacagtgtttagccacacctttatgggc
ggggtttccccagagctccacgcctcccctctccgcctcacttcccctggcgtcagagac
cacgccccctttgctggctggctcacttcggtgaccatcaatggatcggcggttgtaatg
gaaggatcggagggcgttaccatggggggagacgggtgtgggccggaccacgtgtgtcag
aatggaggggtgtgttctgtcgtcgagcagaagaacgtttgcgactgtaccgacaccggc
tacaaaggcaacgactgcagcgaagcccgtgaggactacttagcaacatttaagggatca
gagtatttctgctatgacctgtctcccagccccatccagtcctccagcgatgagatcacc
ctgagctttaagaccctgcagaggaacggcctgatgctccacacgggaaagtcggctgac
tacgtcaacctggccttaaagaacggagccgtgtcactggtcatcaacctggggtccggg
gctttcgaggccctggtggagccggttaacgggaagtttaacgataacgcatggcacgat
gtcaaggtcacgcgcaacctgagacagcactcaggcattggacacgctatggtgaccatc
tctgtggacggcattctgaccactacgggctacacccaggaagactacaccatgttgggc
tcagacgatttcttctatgtgggaggaagtcccagtactgccgacctccctggatctcct
gttagcaacaacttcatgggctgcctcaaagaggtggtgtataagaacaatgatgtacgg
ttggagctgtctcggctggctaagcagggagatgctaagatgaaggtgagcggtatggtg
gcgtttaagtgtgagagtgtggcgaccctcgatcctgtgacctttgacaccccagagtcg
tttgtggcattaagcaagtggagcgccaagaaggcggggtcaatctcctttgacttcaga
acgacagaacccaacggactgatgctcttcagccacgggaaaccacgacagcagcagcgc
aaagacccccgcacaccccccaccctaaaggtggatttctttgccatcgagatgctggat
ggtcacctgtatttgctgctggacatgggctcaggaaccaccaagaccaaggccatcgac
aggaaggtcaatgatggggagtggtaccatgtcgacttccagagggacgggcgctcaggt
actatctcagtgaactcacagcgtacagcgtacacagctccaggggacagtgagattcta
gacctggatgatactctgtacctaggaggattaccagaggatcgccaaggactcatcttc
cctactgaggtgtggacagcgttattgaactacggctatgtcggctgcgtgagagacctg
tttgtggacggtcagagtaaggacatccgtcgtctggctgaggttcagagggctgtaggg
gttaagccctcttgctccagagagcctcctaaacagtgtctgtccaacccctgccaacac
agcgccacctgcagggagggctggaacagatacgtgtgtgactgctctgggaccggatac
ctgggacgggcctgtgagagagatgcgaccatcctgtcctatgatggtagtaagtttatg
aaggtccagttgcccgtagcgatgcacaccgaggcggaggacgtgtcgctacggtttcgc
tcccagcgggcctacggtgttctcatggcaacaacatcacggaactcagccgacacgctc
cgactggagctggatgggggccgtgtccgtctcactgtcaacctagactgtatcaggatt
aactgtaccgccagtaagggtccagagaccatctttgcgggggtggggctgaatgataat
gagtggcacacggtcagagtggtgcgtcgtgggaaaagcctcaaactcaccgtcgacgac
ctgcaacctgtagaaggtcagatggcaggcgaccacacccagctggagttccacaacgtg
gagacaggcattgtgacggagaagcgcttcatgcccgctgtgccctccaacttcataggg
catctgcagggcctcaccctcaacgggatgccttacatagacctctgtaagaatggtgac
atcgactattgcgaactgaacgctgtgattggttataagagtatcgtggcggacccggtt
acgttcaggtcacggtcgagctacgtgaccctgcccacgctccaggcctactactccatg
cacctgttcctccagttcaaaaccacctcccctgacggactcgtactctacaacagagga
gacggaaacgacttcatagtggtggagctggtcaaaggctacctccactatgtgtccgac
ctggggaacggggcacacctgatcaaagggaactccaactctcctctgaatgacaaccac
tggcacaatgtgctcatatccagagacaccaacaacctgcacactgttaagatagatacc
aaggtcactacacagaccactatgggggccaagaacctggatctcaaaggtgacctgtac
gtagggggggtggctaaggagatgtatagggaccttcccaagctcgtccactcccgggaa
ggcttccagggttgcttagcaaccgttgaccttaacggccgactacccgacctgctggcc
gatgctctagctaccaccggacaagtggaaaggggctgtgaaggtacacacacacacaca
ggtcccagtactacctgtcaggaagactcttgctccaatcagggcgtgtgtttgcagcag
tgggagggatttagctgtgattgcagtatgacatcattcggaggaccgctctgcaatgac
gcggggaccacgtatatctttggtcgtgatgggggtgtgattgtgtacacctggcctcct
aacgagcgccccagtacacgggctgaccggctcgcgctgggcttcagcacacagcagaaa
cacgctaccctgctacgggtcgacagtgcctcgggactgggggactacctacagctacag
atagataaaggaaatattagggtagtgtttaacgtggggacagatgacatcaacattgaa
gagactgctaaatccgttaatgatgggaagtaccacatagttcggtttacccgcagcgga
ggcaacgcaaccctgcagctggacgacctgccaatcatagagcgttacccctcaggcaac
attgataacgagcgcctggccatcgctagacagagaatcccctatcgactcggtcgagta
gttgacgattggctattcgacaaaggccgccagctgaccatcttcaacagccagacgacg
gtgacggtgggaagaggaaaggaagcaggtcagttccagggtcagatggccggtctctac
tacaacggactgaagatactcaacatggctgccgaaggacacgcccacatccgcctggag
ggcagcacgcgattggttggggacatgccctcctccatcacgccccaatccagcgctgcc
gccggggcaaaccgatcagaccccgccgccaatgccggcgacatcaccacgacaaccgcc
acaaacaggaagcaaggaggaggaactacgcagcagtcaacagacgacctgctggtggca
tcagctgagtgtcccagtgatgacgaggacattgacccatgtgaccccagctctgcagcc
cacccccctctcccggaggtcaagccgttcccagggacatcagagggagtgagggagtcc
agcagcaccaccggcatggtggtgggcatcgtggcagccgccgccctctgcatcctcatc
ctgctctacgccatgtacaagtaccgcaaccgcgacgagggctcgtaccacgtggacgag
agccgcaactacatcagtaactccgccacccagcctaacggcagcaccaaggacaagccg
ctgggcatcgccaagatctccaagaacaagaagaacaaagacaaggagtactacgtgtga
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