KEGG   Oncorhynchus keta (chum salmon): 118357519
Entry
118357519         CDS       T09424                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
oke  Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:oke00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:oke03036]
    118357519
   03400 DNA repair and recombination proteins [BR:oke03400]
    118357519
Chromosome and associated proteins [BR:oke03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    118357519
DNA repair and recombination proteins [BR:oke03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     118357519
SSDB
Motif
Pfam: MMS19_C MMS19_N TOR1L1_N HEAT_ECM29 Sec7-like_HUS Adaptin_N
Other DBs
NCBI-GeneID: 118357519
NCBI-ProteinID: XP_035590594
LinkDB
Position
24:complement(38837299..38851493)
AA seq 1024 aa
MMAADSALLLGLVEEFVLGQQDRKAVDTATELKAGQFTILQLVEALGLHLTSSQPQTRGR
GVQLLSNVLQECYGDLTEREVEVLIVFYENRLKDHYVITPHVIQGLKALTKCSVLPPGSA
VSILKSLFQDIHVQSLMLAERSCVYNILIQLMESRESELKGLGADFVFGFVQSVDGERDP
RNLLLAFHIARKIVHEGYDLGKFTEELFEVTSCYFPIDFSPPANDPHGITQEELVLALRV
VLTGTPRFAEFLLPLIIEKLDSDVQSAKLDSLQTLTACASVYEHKDLAQFLPGLWASLRR
EVFQTASERVESAGLAAVGSLTACLSRSVLNSDSEDSLNVFLELVLKDCQHHLCEPDLKL
VWPSAKLLQATSTASYRASHRVAAAVLPSLIEQYSSRIQCAQRRTLLEVLQGFVHPVTSS
EEDESVLLDFRQSLCSIVFSALSESNADLQITSMRVLTALGQQTGLLLESDVELAVDHLT
RLILEEGDPKVSLAVVECAGSLARLHPAAFISKMVPRLKEEIFSEPMAQGDSATPSQEHS
QQAVRQRCVAALAAVSSRPSLVQESTPVLLQVLTSAHTGTGAFSLEEVISVCHSLQKIAE
QAQDTEETGGVFHDVIPRLLGLALQAALQGSSGHCSPILEETVLSAMVPIISTTCARLQS
RLAGQTASRAVSLFLDGDVSFLPENAFPAQIQLLKAGDSRSQSQMVCLLVGCVCWLPRTV
EVPQMDRLLLELLELSCTCDHPLSYTSAAKCYAGLVNKSPAGEALDSLIDRTLKRISTVL
DSASSPVRTQAFTLLLWVSKALLLRYHPLSTALTDKLFSLLSDPELGWLAADGFSLLMSD
SPDVLNRGSHADVRIMYRQRFFTENSAKLVEGFNAAVQEKKSGYLKALSHIVNNLPRQVQ
LTELPALLPLLLEALSCPDQGVQVSTLSCLQPVLLDPPSALITQLEVLVGRTLALTTSPT
MKVRIASLRCIHALSRFPEQEIMPFRARVLRALAAPLDDHKRVVRSEAAVARNEWFLLGS
PGGR
NT seq 3075 nt   +upstreamnt  +downstreamnt
atgatggctgcggatagtgccttgctattgggcttggtagaagaattcgtgttgggacaa
caggaccgcaaggcggtcgacaccgcaacagaactcaaggctggacagtttactatactg
cagttggttgaagccttgggtttgcatctgaccagctcccaaccccagacccgaggccgt
ggtgtccagctcctctccaatgtcctacaggagtgttatggagaccttacagagagagaa
gtggaagtccttatagtgttttatgagaacagattgaaggaccactatgtcatcacacca
catgtcatacaggggctgaaagcgctgaccaaatgctcagtgttgccgcctgggtctgca
gtgtccattctgaaatcactattccaggacatccatgtgcagtccctgatgctggcggag
cggtcatgtgtttacaacatcctcatccagcttatggaatccagagagtcagagctgaag
ggcctgggtgcagactttgtcttcgggtttgtccagtcagtggatggggagagagaccca
cgcaaccttctgctggccttccatatcgctaggaagattgtccatgaaggctatgatctt
ggtaaattcacagaggagctgtttgaagtgacatcctgctatttccctatagacttcagc
cctcccgcgaacgacccccatggcatcacccaggaggagctggtcctggccctgagggtc
gtgctcaccggaacaccacgctttgcagagttcctgctgccactgatcattgagaagctg
gactccgatgttcagagtgccaagctggattccctgcagaccctgactgcctgtgcttct
gtgtatgaacataaagacctagcccaattcctaccaggcctttgggcctcgctgcgcaga
gaggtgtttcagacagctagtgagcgggtggagtccgctggcctggccgccgtcggtagc
ctgacagcctgtctctcccgctccgtcctcaactcggactctgaagactccctcaatgtc
ttcctggagctggtcctcaaagactgtcagcaccacctgtgtgagccggacctgaagctg
gtgtggcccagtgcgaagctgctgcaggccacctctaccgcctcctacagggcgagccac
agagttgccgccgccgtcctgccgtccctcatagagcagtacagcagccgcatacagtgt
gctcagcggcgcaccctactggaggtgttacagggctttgtgcacccggtgacgtcatca
gaagaggatgagagtgtgctgttggacttcaggcagtctctgtgcagtatagtgttctct
gctctgtctgagagcaatgctgacctccagatcacatctatgcgtgtgctcactgcactg
ggccaacagacaggcctgctgttagagtcagatgtggaacttgccgttgaccacctcacc
aggctcatcctggaggagggagatcctaaagtcagcctggctgtggttgagtgtgcaggg
tctctggctcgcctgcaccctgcagccttcatctctaagatggttccacggctgaaggag
gagatcttctcagagcccatggcacaaggtgacagcgccacgccgtcccaggaacattca
cagcaggcagtgcgtcagcgctgtgtggcggcgctggctgcggtgtcgtcccggcccagt
ttagttcaggagagcacacctgtcctgctacaggtcctcacctctgcacacactggcact
ggcgcgttctcattggaagaggtgatctctgtctgccacagtctgcagaagatagcagag
caggcccaggacactgaagagaccggtggcgtcttccatgacgtcattccccgcctgctc
gggctggcattgcaggcagctttgcagggttcctcaggtcattgtagcccgatactcgag
gagactgtcctatcagccatggtacccatcatcagtaccacctgtgcccgactacagtcc
cgactggctggccaaacagcctcgcgggccgtgtccctcttcctcgacggtgatgtttcc
ttcctgccagagaacgccttccccgcccagatccagctcctcaaggcaggtgactcccgg
agccagtcccagatggtgtgcctgctcgtgggttgtgtgtgctggctgccacggaccgtg
gaggtgccccagatggacaggctactgttggagctgctggagctgagctgtacctgtgac
catccgctctcctacacgtcagccgccaagtgctacgctgggctggtcaacaagagtccc
gcaggtgaagccctggactctctgatagacaggacgttaaagaggatctccactgtgctg
gactctgcatcctccccagtcagaacgcaggcgttcactctgctgctctgggtgtccaag
gctctcctccttcgctaccaccctctgtccacagccctgaccgacaagctcttctccctg
ctcagtgacccagagctgggttggttagcggccgatggattctctctcctgatgagcgac
tcgccggacgtcctgaaccgcggtagccacgccgacgtgcgcatcatgtaccgccagcgc
ttcttcacggagaactctgccaaactggtcgagggcttcaacgccgcagtccaagagaag
aagtctggctacctgaaggcactgtctcacatagtgaacaatctgcccagacaggtccag
cttacagagctaccagcgctcctgccccttctgctggaggccctgtcgtgtccggaccag
ggggtgcaggtgtctaccctgtcctgcttgcaaccggtcctcctggaccccccttcagcc
ctcatcacccagctggaggtgctggtgggccgcactctggcgctcaccaccagccctacc
atgaaagtgcggatagcctcactgcgctgtatccatgccctctcccgctttccagaacag
gagatcatgcccttccgtgcgagggtgctgcgcgccctggctgcccccctggacgaccac
aagagggtggtgaggagcgaggcggcggtggcccggaatgaatggttccttctggggagt
ccaggaggcaggtga

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