Oncorhynchus keta (chum salmon): 118357520
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Entry
118357520 CDS
T09424
Name
(RefSeq) VPS35 endosomal protein-sorting factor-like isoform X1
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118357520
Membrane trafficking [BR:
oke04131
]
Protein recycling
Others
Retriever complex
118357520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
118357520
NCBI-ProteinID:
XP_035590595
LinkDB
All DBs
Position
24:complement(38806812..38820995)
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AA seq
972 aa
AA seq
DB search
MAAVQWHSRARRYDSELQSCGLEVAPVEFSDYHPLKSITVTDSKSRRGARKGSTSSSSSS
SSSVAPDPLSSMLDGTDPLSMFAAASASESPPTLSQSSSTGDLGRGKRREKEDEVGVDFE
PWSSKRGEILARFTTTEKLSINLFMGSEKGKAPSLASSAVSEKVRTRLEELDDLEEGSQR
ELLNLSQQDYVNRIEELNQSLKEAWASDQKVKALKIVIQCSKLLSDTAVIQFYPSKFVLI
TDILDTFGRLVYERIWSMCSDPRPLPDPSPESFTADEVNDTAKETCLNWFFKIASIRELI
PRLYVEVALLKCNRFLTKCGIQETVPRLTAMIRGIGDPLVAVYARAYLCRIGMEVAPHLK
DSLNKNFFDLLGTFRQIHGDSVQNQLVLQRVEIPVYLTLYSPAIHWILQCVSYRAPEALL
TEMMERCKKLGNNALLLNSVMWAFRAEFIATRATDFIGMIKDCDEAGFPKHLLFGSLGRS
LACADPPEAERLPILNEAWKVITKVRSPQDYINCAEIWVEFTCRHFTKREVNTVLSDIIK
HMTPDRAFEDAYPQLQSVIRKILTYFHDFSVLFSMERFLPFMDMFQKDSVRVGVCLSIMD
VFIKHQQEPTRDPVILNALLHVCKTMHDSVNALTLEDEKRSLALLINGFIRMVSFGRDFE
QQLSFCVEARATFCNLEPVLVQLIHTVNQLAMETRRVMRGSHSRKTAAFVRACAAYSFIT
IPSLTSIFSRLNLYLLSGQVALANQCLSQADAFLKAAVSVLPEVPRSISIEGKLRSSEGF
LLDFINNFLSALLVVPDHPEAGVLFLVRGLLNMVQDYTWEDNSDAKVHVYISALPLLAAM
SQESYLYSIPKVDSNETLYGGDPKFLAEINKLCETLIGQVLDHLKTLGRDESVHRQGSLA
FSLFGCLLAHGDLRNNKLNQLAVNLWNLSHKQGYCNTRTSVRTLEFIKHQAQQPDMAHLS
DMLHRLTLQSRT
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgtgcagtggcactctcgtgcacgcaggtatgattctgaactgcagagctgt
ggcctggaggttgccccagtggagtttagcgactaccatcccctcaagtccatcactgtg
acagactccaagtcgcggaggggagcgcgtaaaggcagcacctcctcctcttcctcctct
tccagctctgtggcaccagatcccctgagctccatgctggatggaacggaccccctgtcc
atgtttgctgcagcctctgccagcgagtcccctccaaccctctcacagagcagctccact
ggggacttgggtaggggaaagaggagggagaaggaggatgaggttggagtggactttgaa
ccgtggtcatccaaacggggagaaatccttgccaggttcactaccacggagaagctctcc
attaatctcttcatgggctcagagaaaggcaaggctcccagtcttgcctcctctgctgta
tcggagaaggtgcgaactcgcctagaggagctggatgacctggaagaggggtctcagcgg
gagctgctgaatctgtcccagcaggactatgtgaaccgtatcgaggagctcaaccagtct
ctaaaagaggcctgggcctccgaccagaaggtcaaggccctcaagatcgtcatccagtgc
tccaagctgctgtcagacacagctgtgattcagttctacccaagcaagtttgtcctcatc
acagacattctggacacctttggacgtctggtgtatgagaggatctggtccatgtgttct
gaccctcgccccctaccagatccctctccagaatcctttacagctgatgaagtgaatgac
acggccaaggagacctgcctcaactggttcttcaaaattgcctccatcagagagctcatc
ccacgactatatgtcgaggtagctctcctgaagtgtaaccgtttcttgaccaagtgtggg
atccaggagacggtgcctcgcctcacagctatgatccgggggataggggaccccctggtg
gccgtgtatgcccgggcctacctctgtcggattgggatggaggtggctcctcacctgaag
gacagcctgaacaagaacttctttgacctgctggggacgttccgtcagatccacggcgac
agtgtccagaaccagctggtcctgcagagggtggagatccccgtctacctgaccctctac
tcccccgccatccactggatcctgcagtgtgtctcctacagagcaccagaggccctgcta
acagagatgatggagagatgcaaaaagcttgggaataatgccctgctgctgaactcggtg
atgtgggcgttcagggcggagtttatcgcgacgagagccaccgacttcatcggcatgatc
aaggactgtgatgaggcaggattccctaagcacctgttgtttggctctctgggccgcagc
ctggcctgtgctgaccctcctgaggcggaaaggctgcccatcctcaatgaggcctggaag
gtcatcaccaaagtgcgaagtccacaggattacatcaactgtgctgagatctgggtggag
ttcacctgtcgtcacttcactaaacgtgaggtcaacactgtgctctctgacatcatcaag
cacatgaccccagaccgggcctttgaggatgcctatcctcagcttcagtccgtgatacgg
aagatcctcacctactttcatgacttctctgtcctcttctccatggagcgtttccttccc
ttcatggacatgttccagaaggacagcgtcagggtgggggtgtgtctctccatcatggac
gtcttcatcaaacaccagcaggagcccactagagatcctgtcatcctcaacgctctactc
cacgtctgcaagaccatgcacgactctgtcaatgctctgacgctggaggacgagaagaga
tctctggccttgttgatcaatggcttcatacgcatggtgtcgtttggccgtgactttgag
cagcagctgagtttctgtgtggaggcccgggccaccttctgtaacctggagccagtgttg
gtgcagctcatccacactgtgaaccagctggccatggagacgaggcgtgtgatgaggggg
agccactcccgcaagactgctgcttttgtcagggcatgtgctgcatacagcttcatcacc
attccctccctcaccagcatcttcagccgcctcaacctctacctgctgtctgggcaggtg
gccctggccaaccagtgtctttcccaggcggatgcattcctgaaggcagcggtcagtgtg
ttgccagaggtgccacgcagtatcagtatcgagggcaaactgcgctcttctgagggcttt
ctgcttgacttcatcaacaacttcctgtcagcactattagttgtgccggaccacccagag
gcaggggtgttgttccttgtgcgtgggctgctcaacatggtgcaggactacacctgggag
gacaacagtgacgccaaggtccatgtctacatcagcgccctgccactactggctgccatg
agtcaggagagctacctctactccatccccaaagtggactcgaatgaaacactttatgga
ggagatcccaagtttttggcagagatcaacaagttatgtgaaactctgattggacaagtg
ctggaccacctcaagaccttgggtagagatgagagtgtccatagacagggtagtctggcc
ttctctctgtttggctgcctcctagctcacggggacctgcgcaacaacaaactcaaccag
ctggctgtcaacctgtggaatctgagccacaagcagggttactgcaacacacgcacctcc
gtgcggacattagagtttattaagcaccaggcccagcagccagacatggctcacctttca
gacatgctccaccgcctcaccttgcagtccaggacctga
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