Oncorhynchus keta (chum salmon): 118357546
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Entry
118357546 CDS
T09424
Name
(RefSeq) transcription factor 7-like 2 isoform X1
KO
K04491
transcription factor 7-like 2
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04310
Wnt signaling pathway
oke04520
Adherens junction
oke04916
Melanogenesis
oke05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
118357546
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
118357546
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
118357546
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
118357546
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118357546
Transcription factors [BR:
oke03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
118357546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
118357546
NCBI-ProteinID:
XP_035590644
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Position
24:40627155..40726215
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AA seq
649 aa
AA seq
DB search
MPQLNGGGGDDLGANDEMISFKDEGEQDEKISENLSAERDLADVKSSLVNESETNQNSSS
DSEAERRPPPRSETFRDKTRESLEEAAKRQDGGLFKSPPYPGYPFIMIPDLTSPYLPNGS
LSPTARTYLQMKWPLLDVNHGSLQSRQALKDARSPSPAHIVGPFCLEFPGQSDLSLHQFQ
LSNKVPVVQHPHHVHPLTPLITYSNEHFTPGNPPPHLQGDVDPKTGIPRPPQHPDISPYY
PLSPGSVGQLPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMQSFLSSRFPHHMV
PPHHSLHQTGIPHPAIVTPNVKQESSHSDIGLNSSTILYTLHRKHQDSKKEDEKKKQPHI
KKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHALTREEQAKYYELARKERQLH
MQLYPGWSARDNYAGNQQGKKKKRKRDKQPGEGNEHREYFPNPCLSLPPITDANTPKKCR
ALFGLDQLSLWCKPCRRKKKCIRYIQGEGSCASPPSSDGSLLDSPPSSPSSVAPSPSSKE
SKPQTEQMQPLSLTMKPAHQPLHHPHLLAGQPPPPSLVLLENSAAAAGKMPGAAHNGAHD
HGNVSSSRQPGSSGASLARPLAALLCHSHSLHPNSTAPQPLSLVTKSIE
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagctcaacggcggtggaggggacgatttgggtgcgaacgatgaaatgatttcc
ttcaaagacgaaggggagcaggatgaaaaaatttcggagaacttatcggcagaaagggat
ttagcagatgtcaaatcttctcttgtaaatgaatcagaaacaaatcaaaatagctcgtca
gattcggaggcggaaagacggcctccgcctaggtctgaaactttcagagacaaaacaaga
gaaagtttagaggaggctgcgaaaaggcaagatggagggctgttcaagagcccaccgtac
ccgggctatccatttataatgatccccgatcttacaagcccgtaccttccgaatggatca
ctttctccaacagctcgcacatacctacagatgaaatggcccttgctagatgttaaccac
ggaagtcttcaaagtagacaagcacttaaagatgcccggtccccgtcaccagcacacatt
gttgggcccttctgcttggaattccccggacagtcagatctgagccttcaccaatttcag
ttgtctaataaagtcccagtggtacagcacccgcaccacgtgcacccgctcacgcctctg
atcacctacagcaatgagcacttcacaccgggcaacccccctccgcacctacagggagac
gtggaccccaaaacaggaattccaaggcctccacaacacccagacatatctccgtattac
cctctatcgcctggctctgtagggcagctcccccatccgctaggctggttagtaccacag
caaggtcaacctgtttacccaatcacaacggggggttttagacacccctacccgactgca
ctcactgtcaatgcatccatgcaaagttttctgtcctccaggttccctcaccacatggtc
ccccctcaccacagtttgcaccagaccggcatcccccaccctgccatcgtcacgcccaac
gtcaagcaggagtcctcccacagcgacataggcctcaacagctctactatactgtacaca
ctccacaggaaacaccaggactcgaaaaaggaggacgagaagaagaagcagccccacata
aagaagccgctgaacgccttcatgctctacatgaaggagatgagggccaaggtggtggcc
gagtgcacgttgaaagagagcgccgccatcaaccagatcctgggacgaaggtggcatgct
ctaacacgagaggagcaggcaaaatactacgagctggcccggaaagagcgacagcttcac
atgcagctctacccaggctggtcagcacgagataactatgcgggtaaccaacagggcaaa
aagaagaagagaaaaagggataagcagccaggagagggcaatgaacacagagaatatttt
ccaaacccttgcctttcactccctccgattacagatgcaaataccccaaagaagtgtcgt
gccttgttcgggcttgaccagctgagtttatggtgcaaaccatgcaggagaaaaaaaaag
tgcattcgctacatccaaggtgaaggcagctgtgccagtcctccctcttcggacggaagc
ttactagactcccccccatcctccccctcctcggtggccccctccccctcctcgaaagag
tccaaacctcagactgaacaaatgcaacctctctcactgactatgaaaccggcccaccag
cctctccaccacccgcacctcctggctgggcaacctcctccgccatctttggttctgctg
gaaaactctgctgctgcagcgggtaaaatgcctggcgcagcccacaatggagcccatgac
cacggcaatgtctcgtcctcgcggcaaccgggctcctcaggcgcctccctggccaggccc
ttggcagcattgctgtgtcattcccactcgctacaccccaactccacggcccctcagcct
ctgtcgctcgtgaccaagtctatagagtag
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