Oncorhynchus keta (chum salmon): 118357635
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Entry
118357635 CDS
T09424
Name
(RefSeq) rhomboid-related protein 1-like
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oke01002
]
118357635
Enzymes [BR:
oke01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
118357635
Peptidases and inhibitors [BR:
oke01002
]
Serine peptidases
Family S54: Rhomboid family
118357635
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rhomboid
EF-hand_7
DUF5580
DUF5580_M
EF-hand_11
Motif
Other DBs
NCBI-GeneID:
118357635
NCBI-ProteinID:
XP_052334353
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All DBs
Position
24:complement(46824955..46889820)
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AA seq
372 aa
AA seq
DB search
MDRSSLFQLIQEQLDPDNTGFIAVENFTSLVEHHELQLDPSKLDMLFALVQSNEEGQVCY
QELIELMSSKRSSSFRRAIANGRRTLQREILLDETGLGVYKRFVRYVAYEILPCETDRRW
YFHQNRLCPPPIFMAIITIVQIIVFMCYGIMLNKWVLQTYQPDFMKSPLVYHPRHRHQVW
RFFSYMFMHVGLEQLGFNALLQLMIGVPLEMVHGILRISLLYMAGVLAGSLTVSITDMRA
PVVGGSGGVYALCSAHLANVVMNWAGMRCPYKLLRMILALVCMSSEVGRAVWLRFSPPLP
SSGPQPSFMAHLSGAVVGISMGLLILRSYEESLQKQCSWWVIVFSFITFLLFAIFWNIFA
YELLGVQLPPAP
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggatagaagctccctgtttcagctcatacaagagcagctggacccagacaacaccggt
ttcattgcagtggagaacttcaccagtctggtggagcaccatgagctgcagctggacccc
tccaaactggacatgctgttcgccctggtgcagagcaacgaggagggacaggtgtgctac
caggagctcattgagctgatgagcagcaagcgttccagcagtttccgacgggccatcgcc
aatggccgccgtacactgcagcgagagatcctattggatgagacgggccttggtgtgtac
aagcgctttgtgcgctacgtggcctatgagatcctgccctgcgagacagaccggcgctgg
tacttccaccagaaccgcctttgtcccccgcccatattcatggccatcattaccattgtc
cagatcatcgtgttcatgtgctatggcatcatgctgaataagtgggtgctgcagacgtac
cagccagacttcatgaagagccccctggtgtaccaccccagacaccgccaccaggtctgg
cgcttcttcagctacatgttcatgcacgttgggttggagcagctggggttcaacgctctg
ctccagctgatgatcggagttcccttggagatggtccatggcatcctacgcatcagtctg
ctgtacatggccggtgttttggcagggtccttgacggtgtccatcacagacatgcgtgct
ccagtggtggggggctccggcggggtctatgctctgtgctcggcgcatctggccaacgtt
gtcatgaactgggccggcatgcgttgtccatacaagctcctccgcatgattctggctctg
gtgtgcatgagttcggaggtgggccgtgcagtgtggctgcgcttctccccgcccttgccc
tcctcagggccccagcccagcttcatggcccacctgtcgggggcggtggtaggcatcagc
atgggcctgctcatcctgcgcagctatgaagagagcctgcagaagcagtgctcctggtgg
gtcatcgtcttctccttcatcacgttccttctctttgcgattttctggaacatcttcgcc
tacgagctgctaggggtgcagctcccgcctgctccctga
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