Oncorhynchus keta (chum salmon): 118357743
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Entry
118357743 CDS
T09424
Name
(RefSeq) protein transport protein Sec24C-like isoform X1
KO
K14007
protein transport protein SEC24
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118357743
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118357743
Membrane trafficking [BR:
oke04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
118357743
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
118357743
NCBI-ProteinID:
XP_052334183
LinkDB
All DBs
Position
24:35661887..35696429
Genome browser
AA seq
1227 aa
AA seq
DB search
MNVNQQTPMASPYGPPQPGYGQPSYAPLGGGYPGPYGPYNGPATAYQPGAPPQAYSLQGY
TPYTSFPSKAVAANPVSDLSSPLDLGPARGPLTSAPHPVSTPQVYSQYPQGDSQNGPPPM
DHSMAQPAHRSPVSQPYSQGAMNLSGPHPSYSQQYGAPPPMQQVTNQMSGMQIGSGPPTS
VGPGYAHHPSSQPPISAAYSSAAPPSYTQAPPPLSAAPSQPPPPSEPAASQPYYGGPPPP
QQQPFPSAHHPSQPFVSSSPYLGPPSQPQAPPVSQQQSFPPGPPAQQPFPNSAPPPVSQA
SYSGPPPLTQHSFPPSSQSGPFPPISISPSQYPGPQPQSQPGPPPFHSGPSPRGPIPPPS
MSQQQANHLPPGPMQQQQPPQPGMQGGYPTQQNGAFGQPRGPQPGYAGPQYSGQQNYGAG
PAPAPVPPAQKRLDPDSIPSPQASELPAVQKSRHRIDPDAIPSPIQVIEDDRVNKSSEPF
TTGVKGQAPPLVTTNFQVKDQGNASPRFIRCTAYNMPCTADMAKQSQVPLAAVIKPLAML
PPDETPPYIVDHGDGGPIRCNRCKAYMCPYMQFIEGGRRFQCGFCSCVTEVPPHYFQHLD
HTGKRVDCYDRPELSQGSYEFVATVDYCKNNKLPQPPSFIFFIDVSYNAVKSGMVNIVCQ
ELKTLLDYLPRENPEADSVVRVGFVTYNKVLHFYNVKSSLAQPQMMVVSDVSDMFLPLLD
GFLVGVNDSRMVIESLLDQIPEMFADTRETETVFGPVIQAGLEALKAADCAGKLFVFHST
LPIAEAPGKLKNREDKKLVGTDKEKSLFQPQSGFYSNLAKECVAQGCCVDLFLFPNQYVD
VATLGVVPVSTGGSVYKYTYFQAETDRERFLNDLRRDVQKPMGFDAVMRVRTSTGIRATD
FFGSFFMSNTTDVELAGLDCDKTVTVEFRHDDKLSEDTGALMQCAVLYTSCSGQRRLRVH
NMAVNCCSQLADLYRNCETDTIINFFSKYAYRSILNTPTKTVRDTMVNQCAQILACYRKN
CASPSSAGQLILPECMKLLPVYLNCVLKSDVLQPGADISLDDRAYLRQLLSCMDVSESHI
FFYPRLLPLVKLDGGSLPMAVRNSEERLSKGGVYLLETGLHLFLWVGANAQQELLSNIFG
TPTFSQIDPNMTSLPELDNPFSQRLREIIDSFRSQRSRYMKLMVVKQEDKAELIFKHFLC
EDKSTSGGASYVDFLCHMHKEIRQLLS
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgaaccagcagactcccatggcgtctccgtacggaccgccccagcctggctat
ggccagcccagctacgctcccctgggagggggctaccctggcccctacggaccctacaac
gggcccgctacagcctaccagcctggggctccaccacaagcttacagtctgcaaggttac
actccctataccagttttccctctaaggctgtggcagctaaccctgtctctgacctgtcc
tctcctcttgacttaggacctgccagaggcccccttacctctgccccccatccagtctcc
accccccaggtgtactcccagtatccccagggagactctcagaacggacccccaccaatg
gatcactctatggcccagccagctcacaggtcgccagtgtctcagccgtatagccaaggt
gctatgaacttgtctgggccacacccctcctactcccagcagtacggtgctccgcccccc
atgcaacaggttaccaatcagatgtcagggatgcagatcgggtccggtccccccacctct
gttgggccgggatatgctcaccatcccagctcccagcctccaatcagtgctgcatactcc
tctgcagccccaccctcctatacgcaagctcctcccccattgtctgctgccccctcccag
cctccccctcccagtgaacctgcagcctcccagccttactatggtggcccccctcccccc
caacaacaacccttcccctctgcccaccatccctcccaacccttcgtctcctcctctcca
tacttgggccctcccagccaacctcaggcccctccagtctcccaacagcagtccttccca
cctggcccccctgctcagcaacccttccccaactccgcccctcctccagtctcccaggcc
tcctactctggtccccctcctctcacccagcactctttccctccctcctcccaatctggc
cccttcccacctatctctatatccccttcccagtacccaggtccacagccccagtcccaa
cccggaccccctcccttccactctgggccctctcctcgaggccccattccacccccctcc
atgtcccagcagcaggccaatcaccttccccccggccccatgcaacaacagcagcctcct
cagcctggcatgcagggaggatacccaacccagcagaatggtgcgtttgggcagcctaga
gggccacagcccggctatgcaggcccgcaatattccgggcaacagaactacggagcaggc
cctgcccctgcacctgttccccctgcacagaagagactggaccctgattccatccccagc
ccgcaagcgtctgagctgccggctgtgcagaaatcgagacatagaatagacccagacgct
atccccagcccaattcaggtgattgaggatgaccgggtcaacaagagcagtgagccattc
acaactggggtcaaaggtcaggctccacccctggtcaccaccaacttccaggtgaaagac
cagggcaatgccagcccgcggttcatccgctgtacagcctacaacatgccctgcaccgcc
gacatggccaaacagtcccaggtccccttggccgctgtaatcaaacccctggctatgctg
ccccccgacgagacccctccgtacattgtggaccatggggacggcggccctatccgctgt
aaccgctgtaaggcctacatgtgtccctacatgcagttcatcgagggcggacgccgcttc
cagtgtggcttctgcagctgcgtcacagaggttcctccccactacttccagcatctggac
cacacagggaagagggtggactgctacgatcggccagagctctctcagggcagctacgag
tttgtggccaccgtcgactactgtaagaacaataagctcccccagcccccgtcgttcatc
ttcttcatcgatgtgtcttacaacgccgtgaagagcggcatggttaacatcgtctgtcag
gagctcaagactctactggactacctgcccagggagaatccagaggcagactcggtggtg
cgtgtgggttttgtaacctacaacaaggtgttgcacttctacaacgtcaagtccagcctg
gcccagccccagatgatggtggtcagtgacgtcagtgacatgttcctccctctgctcgac
ggcttcctggtcggcgtcaacgacagccggatggtcatcgagagtttgctagaccagatt
ccggagatgtttgcagacaccagggagactgagactgtgtttggaccagtcattcaggca
ggactggaggcactgaaggctgcagactgtgccgggaagctgtttgtgttccactccact
ctgcccatcgctgaggctcctgggaaactgaagaatagagaggacaagaaactagtggga
acagacaaggagaagtctctgttccagccccagtctggtttctatagtaacctcgctaag
gagtgtgtagcacagggctgctgtgtagacctcttcctgtttcccaaccagtacgtcgac
gtggcaacgcttggcgtggtgcccgtctccaccgggggttccgtctacaaatacacctac
ttccaggccgagacggaccgtgagcggttcctgaatgatctgcggcgagacgttcagaag
ccgatgggcttcgatgctgtcatgagggtccgaaccagcacaggtatcagagcgacagat
ttcttcggttcgttcttcatgagcaacacgacagacgtggagctggcaggcctggactgt
gacaagactgtcactgtggaattccgccacgacgacaagctcagcgaggacaccggcgcg
ctcatgcagtgtgcggtgttgtacaccagctgtagtggtcagcggcgtctgcgggtccac
aacatggcggtcaactgctgctcccagctggccgacctctaccggaactgtgagacggac
acaatcatcaacttcttctccaagtacgcgtaccgtagcatattgaacacccccaccaag
acagtgagagacaccatggtgaaccagtgtgcccagattctggcctgctaccgcaagaac
tgtgccagcccctcgtctgccggacagctgatcctaccagagtgtatgaagctgctgccg
gtctatctgaactgtgtgttgaagagtgacgtgttgcagccgggagctgacatctcattg
gacgacagagcctacctgagacagctgctcagctgtatggatgtatcagagagccacatc
ttcttctatccccgcctactgcccctggtgaagttggatggagggtcgttgccaatggca
gtgcgtaactcagaggagcgcctgtcgaagggcggagtctacctcctggagacagggctc
cacctcttcctgtgggtgggagccaatgctcagcaggagctgcttagcaacatctttgga
acgcccaccttcagccagatagaccccaacatgacgagtctgccggagctggacaacccg
ttctcccagagactccgagagatcatcgactccttcaggtcacaacggtcacgatacatg
aagttgatggtggtgaagcaggaggacaaggcggagctaatctttaagcacttcctgtgt
gaggacaagagcaccagcggaggagcttcctatgtcgacttcctgtgtcacatgcacaag
gagatccgccagctactcagctag
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