Oncorhynchus keta (chum salmon): 118357825
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Entry
118357825 CDS
T09424
Symbol
rorb
Name
(RefSeq) nuclear receptor ROR-beta
KO
K08533
RAR-related orphan receptor beta
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118357825 (rorb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
oke03310
]
118357825 (rorb)
Transcription factors [BR:
oke03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
118357825 (rorb)
Nuclear receptors [BR:
oke03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
118357825 (rorb)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
118357825
NCBI-ProteinID:
XP_052334546
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Position
25:complement(8865041..8894386)
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AA seq
471 aa
AA seq
DB search
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAAYSCPRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRILNERQQQTGEAEALAR
VYSSSLTNGLNTLNHEIGGTYANGHVIELPKGQVNGGAPGGYYHGMDSTQPSPDQSGLDM
AGMKHIKQEPVYDLTPVTNLFNYSSYQDSQLAPSNVSMGELDRIAQNIIKSHLETCQYTA
DELQQLAWQTHSYDDIKMYQSKTRDMLWQQCAIQITHAIQYVVEFAKRISGFMELCQNDQ
ILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGCDDLVSAVFDFAKSLCS
LQLTEEEIALFSAAVLISTDRPWLMEPRKVQKLQEKIYFALQHIMQKNHIDEDTLAKLIG
RIPTLSALCTLHTEELQAFQQLHPETVNVLFPPLYKELFNPDPNAAITIPK
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcccaaatcgaagttataccatgcaaaatttgcggagacaagtcatcaggaatc
cactatggagtcatcacatgtgagggctgcaaagggttcttcagacgtagtcagcagaac
aacgccgcatactcctgccctcgccagaggaactgtctgatcgacaggaccaaccgaaac
cgctgccaacactgccgcttacagaagtgtctcgcactcggaatgtccagagatgcggtg
aagtttggccgcatgtcaaagaagcagcgagacagcctgtacgccgaggtgcagaagcac
cagcagcggatcctgaatgagcggcagcagcagactggagaggccgaggccctggcgcgt
gtctactcctccagcctgaccaacggccttaacaccctcaaccacgagatcggaggcacc
tacgctaacggccacgttatcgagcttcccaagggccaggtgaatggtggtgcccccggc
ggctactaccatggtatggactccacccagccctccccggatcagtcaggcctggacatg
gcgggcatgaagcacataaaacaggagcctgtctacgacctgacccctgtgaccaacctg
ttcaactacagctcctaccaggacagtcagctggcgccaagcaatgtcagcatgggagag
ctagatcgtatcgcccagaacattataaagtctcacctggagacctgtcaatacacagca
gatgagctccagcagctggcctggcaaacacactcctacgatgacatcaagatgtaccag
agcaaaacgcgagacatgctgtggcagcagtgtgccatccagatcacacatgccatccag
tatgtggtggagtttgccaagcgcatttccggcttcatggagctgtgccagaatgaccag
atccttctgctcaagtcaggttgtctggaggtggtcctggttagaatgtgtcgcgcgttt
aacccactcaacaacacagtgctgtttgaggggaagtacgggggcatgcagatgttcaaa
gctctaggctgtgacgatctggtcagcgcggtgtttgactttgccaagagtctgtgctct
ctgcagctcactgaggaggaaatcgccctgttctccgcagcagtgctcatctccacagac
cggccgtggctgatggagcccaggaaggtgcagaagctccaggagaagatctactttgcg
ctgcagcacatcatgcagaagaaccacattgatgaggacacgctggctaagctgattggt
cggatccccacgctgtcggccctgtgtactctccacaccgaggagctacaggccttccag
cagcttcatcccgagacggtcaatgtgctcttccccccactctacaaggagctcttcaat
cctgaccccaatgcagccatcaccatacccaagtga
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