Oncorhynchus keta (chum salmon): 118357831
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Entry
118357831 CDS
T09424
Symbol
tmc1
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
118357831 (tmc1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oke02000
]
118357831 (tmc1)
03037 Cilium and associated proteins [BR:
oke03037
]
118357831 (tmc1)
Transporters [BR:
oke02000
]
Other transporters
Pores ion channels [TC:
1
]
118357831 (tmc1)
Cilium and associated proteins [BR:
oke03037
]
Other cilia and associated proteins
Stereociliary proteins
118357831 (tmc1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Na_K-ATPase
COX16
Toddler
Motif
Other DBs
NCBI-GeneID:
118357831
NCBI-ProteinID:
XP_052335946
LinkDB
All DBs
Position
25:complement(9204077..9218710)
Genome browser
AA seq
934 aa
AA seq
DB search
MEESRVDDEEDTVIDSDGRQERAKEKERKKERDRKRRRNVARRASSARKEGKELEDRPGR
EERRGRKKRDKEGKGKGGEDERQEEVKNDTVAKTQKNFSNENTRKLEQKEIEVVGEEDGD
TEEKRKNGRSEKGGKKEDNGRGETVEKKQNKKRVETSAEHESSEEEEDEEEKVGEEKTEV
LSPEELEKLKEEVDERKKLISTLRGKPWPMRKKLLTLRESHEFVEKYEGALGKGKSRKLY
AYKVMMLKKWMKFQRDFENFKTACVPWEMKIKEIESHFGSSVASYFIFLRWMYGINMILF
GLTFGLVMVPEALMGRPYGSMPRKTVPRADEANAMDFAVLWDFGGYAQYSVLFYGYYNSQ
RAIGWLKFRMPLSYFLVGVGTVAYSYMVVIRTMARNANEDGGGDNNSFNFSWKMFTSWDY
LIGNPETADNKFASITTSFKEAILEEQESRKDDNIHLTRFLRVLANFLVLCCLAGSGYLI
YFVVRRSQKFALEGLESHSWWERNEVNMVMSLLGMFCPMLFDVISALENYHPRIALQWQL
GRIFALFLGNLYTFIIALMDEINLKREEEEVLKLNMTIWEASLYNGTLGANSTAPPITVH
PADIPRGPCWETMVGQEFVRLIVSDTMTTYITLLIGDFLRAVLVRFLNYCWCWDLEAGFP
SYSEFDVSGNVLGLIFNQGMIWMGAFYAPCLPALNVLRLHVSMYLQCWAVMCCNVPQERV
FKASGSNNFYMAMLLVILFLSTLPAIYTIVTIPPSFDCGPFSGKSRMFDVIQETLESDFP
AWFGKVFSYASNPGLVLPFLLLMVLAIYYLQSTSKSYKQANLELKKKLQTQNEENKKKTK
MAALKAAMDLEEAQKARSEAPRQQRNNNASQQSYTDREKKGGEHRAHQGKSDHQIPPSAT
SPPAPRGHRIPGPLPGNQWQPAPSVQRVQNSQRH
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggaagagagcagagtggatgatgaagaggacacagttattgactctgatgggaggcag
gagagggcaaaagagaaggagagaaagaaagagagggacagaaagagaagaagaaatgta
gcaagaagagcttccagtgcaagaaaagaaggaaaggaattggaggacagaccaggaaga
gaggagaggagaggacgaaaaaaaagggataaggaggggaaagggaaagggggagaggat
gagaggcaggaagaagtgaagaatgacacggttgctaaaactcaaaagaatttcagcaat
gaaaataccagaaaactggagcaaaaagagatagaggttgtaggagaggaggatggggat
accgaggagaagaggaaaaatggacgctcagaaaaaggcgggaaaaaggaggacaatgga
agaggagagacagttgagaagaaacaaaataaaaaaagggttgagacaagtgcggagcat
gagtcatcagaggaagaggaggatgaggaagagaaagtgggagaggagaaaacagaggtc
ttgtctcccgaggagttggagaagctgaaggaggaagtggatgagaggaagaaacttatc
tcgaccctaagaggaaagccttggcccatgaggaagaaactgctaactctacgggagtcc
catgagtttgtggagaaatatgagggagctcttgggaaaggaaagagcagaaaactgtat
gcatataaagtcatgatgttgaagaaatggatgaagtttcagagggactttgaaaacttc
aaaactgcttgcgttccatgggagatgaaaatcaaagagattgagagccattttggctcc
tcggttgcctcctacttcatattcctgaggtggatgtatggcatcaacatgatcctcttt
gggctgacgtttggtctggtcatggtgccagaggctctgatgggcaggccgtatggtagc
atgcccagaaagactgtccctagagctgacgaagccaacgccatggactttgctgtccta
tgggactttgggggctacgcccagtattctgtcctcttttatggctactacaacagccag
cgcgccattggctggctcaagttccgcatgcccctctcctacttcctggttggcgtggga
actgtggcctatagctatatggtggtgataaggactatggcccggaatgctaatgaggac
gggggcggtgacaacaacagcttcaatttcagctggaagatgttcaccagctgggattac
ctcatcggcaaccctgagacagctgacaacaagtttgcctccatcaccaccagctttaag
gaggccattctggaggaacaggagagcaggaaggatgacaacatccacttgactcgtttt
ctgcgggttctggccaacttcctggtgctgtgttgtctagcaggaagtggatatctcatc
tactttgtggtgcgtcgctcccagaagtttgctttagagggactggagagccatagctgg
tgggagaggaatgaggtgaacatggtgatgtccctcctggggatgttctgtcccatgctg
tttgatgtgatcagtgcactagagaactatcacccccgcattgctctacagtggcagctg
ggacgcatcttcgccctattcctggggaacctctacaccttcatcatcgcactcatggat
gagatcaacctcaaacgggaggaggaggaggtgctgaagcttaatatgactatatgggag
gccagtctgtataatgggaccctgggagcgaatagcacagctcctcccatcaccgtccac
cctgccgacatcccacgaggaccctgctgggaaaccatggtgggacaggaatttgtccga
ctcattgtgtcggatactatgacaacctacatcacgctcctgatcggggacttcttgcgt
gctgtgctggtgcgtttcctcaactactgctggtgttgggacttggaggctggatttccc
tcctactcagagttcgatgtcagtgggaatgtcctgggcctgatcttcaaccaaggcatg
atatggatgggtgcgttctatgcgccctgcctgcctgctctgaacgtgctgagactgcat
gtgtcaatgtacctgcagtgctgggcggtcatgtgctgtaatgttcctcaggagagggtg
ttcaaggcctcaggctccaacaacttctacatggctatgctactggtcatccttttcctc
tcaacgctgcccgccatctacaccatagtcactatccccccctccttcgactgtggcccc
ttcagtgggaagagccgcatgtttgatgtgatccaggagacgctggaatctgatttccct
gcctggtttgggaaggtgttcagctacgcctccaaccctggcctggtgctgcctttccta
ctgctgatggttttggccatttattacttgcagtctacatccaaaagctacaagcaagcc
aacctggagttaaagaagaaacttcaaacccaaaatgaagagaacaagaagaagactaaa
atggcagcactgaaagctgccatggatttagaggaggctcaaaaagctcgttcagaagca
ccacggcaacagagaaacaacaatgcctctcagcaatcttatacggatagagaaaagaag
ggtggggaacacagagcacatcaaggaaagagcgaccatcaaattcccccttccgccacc
agccccccggccccgaggggccacagaatccctgggcccctaccaggtaaccagtggcaa
ccagcacccagtgttcagagggtccaaaactcccagagacactga
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