Oncorhynchus keta (chum salmon): 118357858
Help
Entry
118357858 CDS
T09424
Name
(RefSeq) tetratricopeptide repeat protein 28-like isoform X1
KO
K24936
tetratricopeptide repeat protein 28
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oke03037
]
118357858
Cilium and associated proteins [BR:
oke03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
118357858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_2
TPR_8
TPR_10
TPR_MalT
TPR_16
RPN7
TPR_17
TPR_11
TPR_14
TPR_NPHP3
TPR_9
TPR_19
TPR_6
PUB
HlyE
AP4E_app_platf
Motif
Other DBs
NCBI-GeneID:
118357858
NCBI-ProteinID:
XP_052334754
LinkDB
All DBs
Position
25:complement(19110177..19440275)
Genome browser
AA seq
2479 aa
AA seq
DB search
MEKQATFKEKFSIFGSRTVGSAARLVGEEEGGRCGLSKEEFMERVQQSNEACQRGDFQAA
LSLYGDALRADPQNCILYSNRSAAFHKLGCYQAALDDAVKARLLNPKWPKAYFRQGVALQ
YLGRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSPLRESLEPTYQQLQKMKLDKSPFV
VVSVIGQELLTAAHHTASVVVLEAALKIGTCSLKLRGSVFSALSSAHWSLGNAEKSTGYM
QQDLEVSKTLGDQTGECRAHGNLGSAFFSKGNYREALTNHRHQLVLAMKLKDREAASMAL
SSLGHVYTAIGDYPNALASHKQCVLLAKQSKDQLSEARELGNMGAVYIAMGDFENAVQCH
EQHLGIAKALTNKREEARAYSNLGSAYHYHRNFDKAMSYHTHVLELAQELEEQPIEMRAY
AGLGHAARCMQDLERAKQYHEQQLAIAEGLKDRAAEGRASSNLGIIHQMKGDYETALKLH
KTHLSITQELSDYAAQGRAYGNMGNAYNALGAFDQAVRYHRQELQISMEVNDRASQASTH
GNLAVAYQALGAHDRALQHYQNHLNIARELRDVQSEARALGNLGNFHCSRGEFPQAVPYY
EQYLRLSPDLQDMESEGKVCHNLGYAHYCLGSYQDAVKYYEQDLALAKDLHDKLSQAKAY
CNLGLAFKALGDFTKAEECQKYLLSLAQSLNNAQARFRALGNLGDIFVCKKDVIGAIQFY
EQQLALAHQVKERRMEACAYAALGATYRLVQKYDKALGYHTQELEVYQELGDVPGECKAH
GHLAAVYMALGKYAMAFKSYEEQLELGRRLKDPGVEAQVYGNMGITKMNVGVMEEAIGYL
EQQLATLQQLSGNEAVLDRGRAYGNLGDCYEALGDFEEAIKYYDQYLSVAQSLNRMQDQE
KAYRGLGNGHRAMGNLQQSLVCFEKRLVVAHELGECGGKAQAYGELGALHSQLGNYEQAI
SCLERQLGIARDTQDRPLEGDASCGLGVVYQSMGEYETALRCHQSDLEIAEETGRPARQG
RAYGNLGLTYESLGNYERAVVFQEQHLSVAAQTNDLAAKTLAYGSLGRTHHALQNYSQAV
MYLQEGLRLAEQLARREDEAKIRHRLGLSLWASGNLEEAQHQLYRASALFETIRHEAQHS
TDYKLSLFDLQTSSYQALQRVLVSLGHHDEALAVAERGRTRAFADLLVERQTGQQDSDPY
TPVTVEHILDTVNSQRALVLYFSMAAGYLYSWLLAPGAGILKFHEVYLGEGVTEGGPDLH
EGGGGGVASGSSLEQHIASAREALGVESYYSRGCSSSETESEAGDLLDQQFEELNNKLNS
VTDPTGFLRMVSRNNLFNRSCQSMTSLFSNTVSPAKDGCSSLPRRPSNLNKPPLRALYDL
LIAPMEGGLMHSSGPVGRHRQLILVLEGELYLIPFALLKGSSSNEYLYERFSLIAVPSIQ
GLGISSKGHSRRAGPASCGGVSMAAVVGNPRLPSSVMDRWLWGPMPSAEEEALMVSELLG
CHPLAGSSATKERVMSALTQAECAHFATHISWKLAALVLTPNPESIPGGAGAGVGTGGRG
AGGGKRGSGGKGRKGSFGSSYTIPESLHLQDDGSDAESICDSPPLQEFLLTAADILDLRL
PVKLVVLGSYQESSSKVTADGVVGLTRAFLAAGAQCVLVSLWPVPVSASKVFVHAFYTAL
LNGTKASAALADAMKTVQSSKQYSHPSNWAGYMLIGNDVKLNSPSSLIGQALAEILQYPE
RARDALRVLLHLVEKSLQRIQNGQRNSMYTSQQSVENKVGGVPGWHALLTAVGFRLDSAG
TGIPAAVFFPTADPGDRLQQCSTTLQSILGLPPPALQALCKLITASEAGEQLINRAVKNM
VGMLHQVLVQLQTGEKEQDFSLLPIQVSISVQLWRLPGCHEFLAALGFDLCEVGQEEVVL
KTGKQANRRTMHFALQSLLALFDSTELPKRLSLDSSSSLESLASAQFVSNPLPLGYPSLP
FSPPCLDSLASDAISVYSLSSVASTMSFASKSECDFLGHRQRGGATAHFSAHKHPHIPRS
RSSPHGAAAAAAGVGRGDDEEYEGFSIISSEPLGSHCDSLPLPPGHGQRHHRGGRGVVSS
SSSGTGRGYQVSVSSRGSVSTPTSPVKTSLVPSPNPPLQKVPGKVSSSDTGESDQSSTET
DSTVKSQEEKTVPLDPQELAQKILEETQNHLRAVGSLQQAGAEGAAAGATSARSSVFRSS
ETSAFSRPSSSASVRVQSSPRPKPPSRSSSLQKISSGYNSPAASETSLKDGSHPSPTLDS
QAQFKLKYPSSPYSGHISRSPSNVSPSSGHQSPACSAPSPALSYSSTGSACSSPADAPDL
DRLRRGVIDEKVVAIHNLKTFWANTASQQQQQHLGPVRALRGAPGPLVSAKRDVLSLLNL
SPRHCSPSDAHDSLELRELGLQSLDRGNKNPSNGHNPRKMPPSPSISTSSSPGARSIRLP
AGNGYKFLSPGRFFPSSKC
NT seq
7440 nt
NT seq
+upstream
nt +downstream
nt
atggagaagcaagcaacttttaaggaaaagttttcgatcttcggctcccggacagttggc
agtgcggcacggcttgtgggtgaagaggaagggggcagatgtggcctcagcaaggaagag
ttcatggagagagttcagcagagcaacgaggcgtgccaacgcggcgacttccaggctgcc
ttgagtctctatggcgacgccctgcgagccgacccacagaactgcatcctctacagcaac
cgctcagcagcctttcacaaactgggatgctaccaggctgccctggacgacgctgtcaag
gcccgtctactcaaccccaagtggcccaaggcatacttccgacagggtgttgcccttcag
taccttggtcgccatgccgacgcgttggccgccttcgcctcggggctggcccaagacccc
aagagcctgcagttactggttggcatggtggaggctgccatgaagtccccactacgagag
tccttagaacccacctaccagcagctgcagaagatgaagctggacaagagtccattcgtg
gtggtgtcagtgattggtcaggagctgctcacggcggcccaccacaccgcatccgtggtg
gtcctggaggccgcgttaaagatcggtacctgcagcctcaagctgcgtggctccgtcttc
tcagccctcagcagcgcccactggtccctgggcaatgcagagaagagcaccggatacatg
cagcaagacctggaggtttccaagacactaggtgaccaaacaggtgaatgccgtgcccat
ggcaacctgggctcagcattcttctccaaggggaattaccgcgaggccctgaccaaccac
cgccaccagctggtcttggctatgaagctcaaggacagggaggcagcttctatggccctg
agcagcctgggtcatgtgtatacagccatcggggactaccctaatgccctggccagccac
aagcagtgtgtcctactggcaaagcaatccaaagaccagctgtcagaggcacgagagttg
ggcaacatgggcgctgtctacattgctatgggcgactttgaaaacgctgtacaatgccac
gagcagcacctgggcatcgccaaggccctgaccaacaagagggaggaggcccgcgcctac
agcaacctgggcagtgcctaccactaccaccgtaactttgacaaggccatgtcctaccac
acccatgtgctggagctggcccaggagctggaggagcagcctatagagatgagggcgtac
gctggactgggtcatgctgcacgctgcatgcaggacctggagagagccaagcagtaccat
gaacagcagctggccatcgctgagggcctgaaggacagagctgcagagggaagagcctcc
tccaacctgggcattatccaccagatgaaaggagactatgagactgcacttaaactccac
aaaacccacctctccatcacccaggagctcagtgactatgctgcccagggccgggcctat
ggtaacatgggcaatgcctacaacgcgctgggggcctttgaccaggccgtacgctatcac
cgccaggagctacagatctccatggaggtcaatgaccgggcctcacaggcctctacccat
ggtaacctggccgtggcctaccaggccctgggggcccacgatcgtgccctgcagcactac
cagaaccacctcaatatcgcccgtgagctgcgagacgtccagagcgaggctcgcgccctt
ggcaatctgggaaacttccactgctcccggggagagttcccccaagccgtgccctactac
gagcagtacctccgcttgtcccctgacctccaggacatggagagtgaggggaaagtctgc
cacaacttgggctacgcccactactgcctgggaagctatcaggacgctgtcaagtactat
gagcaggacctggctctggctaaggacctgcatgacaagctgagccaggccaaggcctac
tgtaacctgggactggccttcaaggctctgggtgacttcaccaaggcagaggagtgtcag
aagtacctgctctctctagcccagtctcttaataatgcacaggcccgcttcagagccctg
ggcaacctgggggacatctttgtctgcaagaaggacgtgattggggctatccaattctat
gagcagcagctggccctggctcaccaggtgaaggagcgcaggatggaggcgtgtgcctac
gcggccctgggtgccacctacagactggtgcagaagtacgacaaggctctgggctaccac
acccaggagctggaggtgtaccaggagctgggcgatgtgcctggggagtgtaaagcccac
ggccacctggcagccgtctacatggctctggggaagtacgccatggccttcaagagctac
gaggagcagcttgagctgggccgcagactgaaggaccccggggtagaggcccaggtctat
ggcaacatgggcatcaccaagatgaatgtaggggtgatggaggaggctataggctacctg
gaacagcagctggccaccctccagcagctgagtggcaacgaggccgtgctggaccggggt
agggcctatggtaacctcggagactgttacgaggccctaggggactttgaagaggccatt
aaatactatgaccagtacctgtctgtggcccagagccttaaccggatgcaggaccaggag
aaggcctaccgaggcctggggaatggacacagggcgatgggaaacctgcagcagtccctg
gtgtgttttgagaagcgtctggtggtggcccatgagctgggggagtgtggagggaaggcc
caggcctacggggagctaggggcgctccacagccagttggggaactatgaacaggccatc
tcctgtctggagcgccagctaggcatcgcccgtgacacccaggaccgcccactagagggc
gacgccagctgtggcctgggcgtggtctaccagtccatgggagagtacgagacggccctg
cgctgccaccagagtgacctggagatcgcagaggagacgggcaggcccgcccgacagggc
cgtgcctatggcaacctgggcctcacctacgagtcgctaggcaactatgagcgtgcagtg
gtgttccaggagcagcatctgagtgttgcagctcagaccaacgacctggcggccaagacc
ctagcctacggcagtctggggaggacacaccacgcactgcagaactactcacaggctgtc
atgtacctgcaggaaggcctacgactggcagagcagctggctcggcgtgaggacgaggct
aagatccgccatcgtctggggctgtctctgtgggccagtgggaatctggaggaggcccag
caccagctctaccgagcatctgcattgtttgagaccattcgtcatgaggcccagcacagc
accgactacaaactttctctgtttgacctgcagacctcctcctaccaggcactccagagg
gtccttgtcagcctaggccaccatgacgaggcgttggcagtggcagagcggggtcggacg
cgggcctttgctgacctgctggtggagaggcagacaggccagcaggactcagacccctac
accccagtcacagtggagcacatcctggacacggtgaacagccagagggccctggtgctc
tacttctccatggctgctgggtacctgtacagctggctgctggctccaggagcaggcatc
ctgaagttccatgaggtgtacttgggagagggcgtgacagaaggcgggccagacctccat
gagggcgggggagggggtgtggccagcggctcgtctctggagcagcacattgccagtgct
cgggaggccctgggagtagaatcttactacagcaggggttgttccagcagtgagacagag
agtgaggcaggggacctgttggaccagcagtttgaggagctcaacaacaaactcaactct
gtgactgaccccacaggcttcctccgcatggtgtccagaaacaacctgttcaacaggagc
tgccagagtatgactagcctattcagtaacaccgtgtccccagccaaagatggctgctcc
tctctgccccgccgacccagcaacctcaacaaacctcctctccgtgccctctacgacctg
ctcatcgcacccatggaagggggcctgatgcattccagtggtcccgtgggtagacacaga
cagctgatattggtattggagggggagttgtacctcatccccttcgccctgctgaagggc
agctcctctaatgagtacctatatgaacgcttcagcctcatcgccgtgccctccatccag
ggtctgggaatcagctccaagggtcattctcggcgggcggggccggcttcctgtgggggc
gtgtccatggcagctgtggtgggtaaccctcgtctgccgtcgtctgtgatggaccgctgg
ctgtgggggcccatgccctcggccgaggaggaggccctcatggtgtctgagctgctgggc
tgccatccactggctggatcctctgccaccaaggagagggtgatgagtgccctcacccaa
gccgagtgtgcccacttcgctacccacatatcctggaagctggccgccctggtgctcaca
cccaacccagagagcatacccggcggggcaggggcgggtgtagggactggagggagaggg
gcagggggtggaaagagaggcagtggaggcaagggcaggaagggctcatttgggagcagc
tacaccatcccagagagcctgcacctgcaggatgatgggagcgacgctgagagtatctgt
gacagccctcccctgcaggagttcctgctcaccgctgctgatatactggacctgaggctg
cctgtcaaactggttgtgctgggctcataccaggagtccagcagtaaggtgacagcagac
ggtgtggtaggtctgaccagggccttcctggctgctggggcccagtgtgtcctggtgtct
ctgtggcctgttcctgtgtcagcctccaaagtgttcgtccatgccttttacaccgctctg
ctcaatgggaccaaggccagcgctgccctcgcagacgccatgaagactgtccagagcagc
aagcagtactcccacccctccaactgggcaggctacatgctgattggtaatgatgtgaag
ctgaacagcccctcgtccctgattggccaggcactagcagagatcctacagtatccagag
agagcacgggatgctctgcgggtcttactgcaccttgtggagaagtctctccagaggatt
cagaacggccagcgtaactccatgtacacgtcccagcagagtgtggagaacaaggtgggg
ggcgtcccaggctggcatgccctgctgaccgctgtgggcttccgcctggactcggctggc
accggcatccctgctgctgttttcttccccacagcagaccctggagacaggctgcagcag
tgtagcaccaccctgcagtcaatacttggtctaccgcccccagctctccaagccctgtgt
aaactcatcaccgcctccgaggcaggagagcagctcatcaaccgggctgttaaaaatatg
gtgggaatgctccaccaggtgctggtccagcttcagacaggggagaaggagcaggacttc
tctctgctgcccatccaggtgtccatcagtgtgcagctctggagactgccaggctgccat
gaatttctggctgcactaggatttgacctgtgtgaggtgggtcaggaggaggtggtactg
aagacgggcaagcaagccaaccgccgcaccatgcactttgccctccagtccctgctggca
ctgtttgactccacagagctgccaaagcgtctcagcctggacagctcgtcctccctggag
tctctggcctcggcccagtttgtctccaaccccttaccactgggctaccccagcctgccc
ttctccccaccctgcctggacagtctggcctcagacgccatctccgtctacagcctgagc
tccgtggcctccaccatgagctttgcctccaaatcagagtgtgacttcctgggccatcga
cagcgtggtggggccacagcacacttttctgcccacaagcacccacacattccccgcagt
cgctcctctcctcacggggcggctgcagcagcagcaggtgtgggccggggagatgacgag
gagtatgaaggcttttccataatcagcagtgagcctctgggaagccactgtgactccctg
cctctacctccgggtcacgggcagcgccaccaccgtgggggcaggggtgttgtcagtagt
tccagctcgggcactggtaggggttaccaggtgtctgtgtcatctcgaggcagtgtcagc
acccccacctccccggtcaagaccagcctggttcccagccccaaccctcccctccagaag
gtgccaggcaaggtgagcagctcagacacaggcgagtcggaccagtccagcactgagaca
gatagcaccgtcaagtcccaggaggagaagactgtccctctggacccccaggagctggcc
cagaagattctggaggagacccagaaccacctgcgggcggtggggagtttacaacaggct
ggggctgagggggctgcagctggagctacctcagccaggagctctgtcttccgctcctca
gagaccagcgccttcagccgtcccagcagcagcgccagtgtccgtgtccagtcctcccca
cgacccaaacctccctcccgctcttcctccctgcagaagatcagctctggttacaacagc
cctgcagcctcggagacctctctaaaggatggcagtcacccctcccctaccctggacagc
caggcccagttcaagctcaaataccccagctccccctatagtggtcacatctcccgctct
cccagtaacgtgtcccccagctctggccaccagtccccggcttgcagtgccccatcccca
gctctctcctactcctccacgggctctgcctgctccagccctgccgatgccccagacctg
gaccgcctcaggaggggcgtcatcgatgagaaggttgtggccatccacaacctgaagaca
ttctgggccaacacagcgtcccagcaacagcagcagcatctgggtccagtccgggctctc
cgtggcgccccaggacccctggtctctgccaagagagatgtgctgagccttctgaacctc
tccccacgacactgctcccccagcgacgcccatgacagcctggagctgcgggagctgggg
ctgcagtcattggacaggggcaacaagaacccttccaatggacacaaccccagaaagatg
cccccctcgccctctatttctactagcagcagccctggtgctcgctctatcagactacct
gccggcaatggatacaagttcctctcccctggcaggtttttcccatcctccaaatgctga
DBGET
integrated database retrieval system
