Oncorhynchus keta (chum salmon): 118357949
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Entry
118357949 CDS
T09424
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 1-like
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
oke01100
Metabolic pathways
Module
oke_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
118357949
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
oke01003
]
118357949
Enzymes [BR:
oke01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
118357949
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
118357949
Glycosyltransferases [BR:
oke01003
]
Glycan extension
O-Glycan
118357949
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
Glyco_tranf_2_2
TOBE_3
Motif
Other DBs
NCBI-GeneID:
118357949
NCBI-ProteinID:
XP_035591147
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All DBs
Position
25:32035419..32043128
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AA seq
542 aa
AA seq
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MCSESTMLRRWLLALVARVGVIALVVCCCLSLLYLLACKPQSSYSNEQAQVWAGGATSKE
GYLALLQESEDTHRHYINSLSKQIAQLKEALQMRTQQLQESLEKARAKGVLPMGLEGLHR
PQTHTDLQEFFKAQLSRAEVQSGEKLPSEYAVIPYESFTLHRVYQLEMGLTRHPEERPVR
KDRRDELTGTLEIALQVLNGPRRHGERHRRSYSPSDFIEGLTRTERDKGTVYELMFKGER
PQDFRQLVFFRPFGPVVRVKNERVDTRHMLINIIVPLSRRADTFRQFINNFRKVCIQQEG
KTHLTVVYFGRDQIDEVKAIMDQTSRETQFRNFTLIQLNEEFSRGRGLEVGARAWRRSHN
VLLFFCDVDIHFTLDFLTSCRLNAEPGKKVFYPVLFSQYNPSLIDNNQSPFPSIQQQLVI
MKDAGFWRDFGFGMTCQYRSDFINIGGFDRNTKGWGLEDVHLYRKYLHSKLMVIRSPSRS
LFHLWHEKQCSDELQPDKYKMCMQTKAMSEASHGHLGELFFTQEIQEHMERQKLLNDSSH
LR
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgtgctctgaatccacaatgctccggaggtggctgttagctctggtggcccgtgttggg
gtcatagcactagtggtgtgctgctgcctgtctctactctacctgctggcctgcaaaccc
cagagcagctacagcaatgaacaggcccaggtctgggctggaggagccaccagtaaagag
ggttacctggcgctactgcaggagagcgaggacacacacaggcactatattaacagtctc
agtaagcagatagctcagctcaaagaggctcttcagatgaggacccagcagctgcaggag
tctctggaaaaggccagggccaaaggggttctacctatggggctggagggtctgcatagg
ccccagacacacaccgacctccaggagttcttcaaggcccaattgagccgggctgaggtc
cagtctggtgagaagttgcccagtgagtacgccgtgattccctacgaaagcttcaccctg
cacagggtgtaccagctcgagatgggtctgacccgtcatccagaggagaggcctgtgagg
aaggaccggagagacgagctgacaggcacgctagagatagccctgcaggtcctcaacgga
ccccggagacacggggagcgccaccgacgctcctattcaccatcggacttcatagagggg
ctgacccgtacagagcgtgacaaggggacagtgtatgagctgatgtttaagggcgagagg
ccgcaggacttcagacagctggtgttcttcagacccttcggcccggtggtcagggtgaag
aatgagagggtggacacacgccacatgctcatcaacatcatagtaccactgtccaggagg
gctgacacattccgacagttcatcaacaacttcagaaaggtgtgcatccagcaggaaggg
aagacccacctcactgtggtctactttggcagggaccagattgacgaggtcaaagccatc
atggatcagacatccagggaaacccagttccgaaacttcacgctgatccaactgaatgag
gaattctctcgtgggcggggcttagaggtgggcgcacgggcctggaggcggagccacaac
gtgctgctgttcttttgcgatgtcgacatccactttaccctagacttcctcacatcctgc
agactcaatgcagagcctggtaagaaagtgttctacccagttctcttcagtcagtacaat
ccatctcttatcgacaataaccagagtcccttcccttctattcaacaacaactggtgata
atgaaggatgctggattctggagagattttgggtttggcatgacttgccagtataggtct
gatttcatcaacataggtgggtttgaccggaacaccaaaggctggggtttggaggatgtt
cacctatacagaaagtacctgcacagcaagctgatggtgattcgatctccctcccgtagc
ctcttccacttgtggcatgagaagcaatgctcggacgagctgcagccagacaagtataag
atgtgtatgcagaccaaggccatgagcgaggcctctcacggccacctgggggagctgttc
ttcacacaggagatccaggagcacatggagaggcagaaactactgaacgactcaagtcac
ttgaggtag
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