Oncorhynchus keta (chum salmon): 118357965
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Entry
118357965 CDS
T09424
Name
(RefSeq) ATP-binding cassette sub-family A member 2-like isoform X1
KO
K05642
ATP-binding cassette, subfamily A (ABC1), member 2
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke02010
ABC transporters
oke04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
118357965
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
118357965
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oke02000
]
118357965
Transporters [BR:
oke02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
118357965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
ABC2_membrane_2
Motif
Other DBs
NCBI-GeneID:
118357965
NCBI-ProteinID:
XP_052335101
LinkDB
All DBs
Position
25:complement(34716045..34887343)
Genome browser
AA seq
2546 aa
AA seq
DB search
MGFLHQLHLLLWKNVSLKRRGPWVLAFEIFIPLVLFFILLGLRQKKPAIPVKEAFYSAAP
LTSAGIIPIMQSLCPDGQRDEFGFLQYKNSTVTQLLERISDVVLQNHLLTADRPGLGQEL
ESLQQHLERLSTPTGPSPLDNGFNTSQGFTVASMLKNQSVFRQFLVRNLSLPNNTASLLL
STPVNLKEVFNMIFGLYPRAGGGSSHASGRAKETAQTPAEKSLQLEEKLLGAMHRLDGGL
IHKALRDPTKAAHRQGLLKLMSQALGLAEGEAGQRYDPQGLKEMEGVLLTGAMLEMLTCG
ENGTGELRKILLVPEKQQSLLQAYRSTVCGGGEGQRTERFGEMSQELRDQIDTESLVDKL
RLEKVNFSAPLSQSHLGALLKDLADVERLFRDVDLLSGLARLLPKGACAGGHTAPGAPSN
TTTSWARNATTWGPNTTETPGEEGGEEEGGGREKEKGKENPHSQFSAFVQLWAGLQPILC
GNDRIIEPEALKQGNMSSLGFTSKEQRNLGLLVHLMTTNPKILYSPVGSQVDKVIQKANE
TFAFVGNVTHYARVWLNISAQLRIYLEEGKLHHQLAWLQLLTSNLRGHPELLNGTDSDLL
RGLLDGNYTLSNTSTLLEQLDTIDNAACGWTHFMSKVSVDIFKGFPDEDSIVNYTLNQAY
HDNISVFASVIFQTNRDGSLPPHVLYKIRQNSSFTEKTNEIRRAYWRPGPNTGGKFYFLY
GFVWIQDMIERAIINTFVGHDVVEPGNYVQMFPYPCYTRDDFLFVIEHMMPLCMVISWVY
SVAMMIQHIVAEKEHRLKEVMKMMGLNNAVHWVAWFITGFVQLSISVTALTAILKYGRVL
LHSDILIIWLFLSIYAIATIMFCFLVSVIYSKAKLASACGGIIYFLSYVPYMYVAIREEV
AHDKITAFEKCIASLMSTTAFGLGSKYFALYEVSGVGIQWRTINQSPVEGDDFNLGLSMM
MLIIDASVYGVLTWYIEAVHPGMYGLPRPWYFPLQKSYWLGSGRVETWEWPWGGAARLSV
MEEDQACAMEHRRSEEMRGMEEEPSHLPLVVCIDKLTKVYKTGNKLALNKLSLNLHENQV
VSFLGHNGAGKTTTMSILTGLFPPTSGSATIYGHDIRTDMERIRQNLGMCPQHNVLFDKL
SVEEHLWFYSKLKGMAEEDIRKEMDKMIEDLELNNKRHSLVQTLSGGMKRKLSVAIAFVG
GSRAVILDEPTAGVDPYARRAIWDLILKYKQGRTILLSTHHMDEADLLGDRIAIISHGKL
KCCGSPLFLKSTYGDGYKLTLVKKQSESGDQVTQPPFFRSPCSSSSLSPSFSLSPSSLSP
CSEARVTKFIRQFVGSCLLVSDSNTELSYVLPSEAVKKGCFERLFQALEQSLDLLALTSF
GVMDTTLEEVFLKVSEEDQSLENSDADMKDSPGGSSVGKPAAAVVGLGASGPQGDGPGPG
GPAGGSSSVLRPGVELSNLLNCSRLSQSQSSLRSSSSLGSVRGDEGGLYTDFYGDYCPLF
GNGQDPDSTSLTAEVDETSGPEQPVVLEDQGSVKLEGWWLKLRQFHGLIVKRFHCAKRNT
KGLFSQILLPAFFVCVAMTVALSVPSIGDLPPLVLSPSQYHNYTQPRGNFIPYANEDRPQ
YSSKLSPDASPQKIANTLRLPSGVGATCVLKTPFNSTLDQLAQTLNPSANNSKTLAARYF
DSMCLDSFTQGVPLSNFVPPPPSPAPSDDPDPRFEDRLWNFTATTLTTVRETVTSPPTLP
LSIREPVRCICSMQGTGFSCPSGVGGRPPLMKVVTGDILVDITGRNVSEYLLYTSDRLRL
HRYGGLTVGNIQKSVPASFGKNNPPMVRKIAVRRSAQVLYNNKGYHSMPTYLNVLNNAIL
RANLPPGKGNPAAYGITLTNHPMNRTSARLSLDYLLQGTDVVIAIFIIVAMSFVPASFVV
FLVAEKSTKAKHLQFVSGCDPVIYWLANYVWDMLNYLVPATCCVLILFVFDLPAYTSPTN
FPAVLSLFLLYGWSITPVMYPASFWFEVPSTAYVFLIVINLFIGITATVATFLLQLFEHD
KDLKLVNSYLKSCFLIFPNYNLGHGLMEMAYNEYINEYYAKIGQFDKIKSPFEWDIVTRG
LVAMTIEGFVGFFITILCQYNFLRKPSRVPVSSQPIEDDDEDVASERRRVLRGEADNDML
KIDNLTKVYKSRKMGRILAVDRLCLGVRPGECFGLLGVNGAGKTTTFKMLTGDESTTGGE
AFIGGSSILKELLRVQQSIGYCPQFDALFEDLTAREHLELYTRLRGIPWKDEERVVSWAL
EKLELSKYADMPAGTYSGGNKRKLSTAIALIGYPSLVFLDEPTTGMDPKARRFLWNLILD
ILKTGRSVVLTSHSMEECEALCTRLGIMVNGRFKCLGSIQHLKNRFGDGYMITVRTKTSS
SVKEVVRFFNRNFPEAVLKESHHTKVQFQLKSERISLAQVFSKMEQVVEVLGIDDYSVSQ
TTLDNVFVNFAKKQSDNLEQQESSPPGGGQSPLQRLLTLLRPRLANTELDALVSEEPEEL
ESDDDEGLISFEEERVQLSFNTDTLC
NT seq
7641 nt
NT seq
+upstream
nt +downstream
nt
atgggattcctccaccagctacatcttctcttgtggaagaatgtgtctttgaagagaaga
ggaccgtgggtgttggcctttgagatcttcatccccctggtccttttcttcatcctgctg
ggcctgcgccagaagaaacctgccatccctgtcaaggaagccttctacagcgcagcaccc
ctcacctcagcaggcatcatccccatcatgcagtctctgtgtcccgacggccagagggac
gagtttggcttcctgcagtacaagaactccactgtgacccagttgttggagcggatcagt
gatgtggtgttacagaaccacctgctcacagcagacaggccaggactgggccaggagctg
gagtccctgcaacaacacctggagagactcagcacgcccacagggccatccccgctggac
aatggcttcaacaccagccaagggttcaccgtggccagtatgttgaagaaccagtctgtg
ttccgtcagtttctggtcaggaatctgtctctccccaataacacggccagccttctgctc
tccactcctgtcaacctcaaagaggtcttcaacatgatatttggcctgtaccccagagct
ggaggggggagtagtcatgcttcaggcagggcaaaagagaccgcacaaacccctgcagag
aagagccttcaactggaagagaagcttctgggagccatgcatcgtctggacggaggactg
atccacaaagctttacgagacccaaccaaagcagcccatcggcagggcctactcaaactc
atgtctcaggcattaggcctagcagaaggagaggcaggccagagatacgatccccaggga
ctgaaggagatggagggtgttctcctgactggtgccatgttggaaatgcttacttgcggg
gagaatgggactggtgagctgagaaagatcctattggttcctgagaagcagcagtccctg
ctccaggcctatcgcagcacagtgtgtggtggcggggagggacagaggactgagcgcttt
ggagagatgagccaggagctgagagaccagatagacacagagagcctcgttgacaagctg
cgtctggagaaggtcaacttctcggctcctctgtcccagtcccacctgggtgctctgctg
aaagacctggctgacgtggagaggctcttcagggacgtagacctgctgtcaggcctggct
cgcctgctccctaagggggcctgtgctgggggtcatacggcccctggggccccctccaac
accaccacctcctgggcccgcaacgccactacctgggggcccaacaccactgagacccct
ggggaggagggaggagaggaggagggtggaggacgagagaaagagaaagggaaagagaat
cctcattcacagttttctgcttttgtacagctgtgggcagggctgcagcctattctgtgt
gggaacgataggatcattgagcctgaagcgttgaagcaggggaatatgagctctctgggt
ttcaccagtaaagagcagcgcaatctgggtttactcgtgcatctgatgactacaaatccc
aagatcctctactctcccgttggctcacaggtggacaaagtcattcagaaggcaaatgag
acatttgcgtttgtggggaacgtgactcactacgccagggtgtggctcaacatctctgcc
cagctcaggatctacctagaggagggcaagctgcaccaccagctggcctggctgcagctg
ttgacctctaacctgcgtggtcacccggagctgctgaatgggacggacagtgacctgttg
cgtggactgctggatggcaactacaccctgtccaacacctccaccctgctggagcagctg
gacaccattgacaacgcagcctgcggctggacacacttcatgtccaaggtaagtgtggat
atcttcaagggtttccctgatgaagacagcatcgtcaactataccctgaaccaagcctac
cacgataacatctcagtatttgccagtgtgatattccagaccaacagagatggctccctg
cctcctcatgtcctctataagatcagacagaactccagcttcacagagaaaaccaacgag
atccgccgggcctactggcgcccggggcccaacacagggggaaagttctactttctctat
ggctttgtgtggatccaggatatgatagagagagccatcattaacacgtttgtgggtcat
gacgtggtggagcctgggaactatgttcagatgttcccctacccctgctacaccagagac
gacttcctgtttgtgatcgagcacatgatgcctctgtgcatggtgatctcctgggtgtac
tctgtagccatgatgatccaacacattgtggctgagaaggagcaccggctcaaagaggtg
atgaagatgatgggcctgaacaatgcggtccactgggtggcctggttcatcactggcttc
gtccagctgtccatctcagtgaccgccctgacggcaatattgaagtatggcagagtgctc
ctccacagtgacatcctcatcatctggctcttcctctccatctacgccatcgcaacgatc
atgttctgtttcctggtgtcagtgatctactccaaggccaagctggcgtctgcctgtggg
gggataatctacttcctaagctacgtcccctacatgtacgtggccatcagggaggaggtg
gcccatgacaagatcaccgcctttgaaaagtgcattgcttctctgatgtcgaccacagcg
ttcggcctgggctctaagtactttgccctgtatgaggtgtcaggagttggcatccagtgg
cgcaccatcaaccagtcgcctgtagagggcgatgactttaacctcggtctgtccatgatg
atgctcatcatcgatgccagtgtgtatggagttctcacctggtacatagaagctgtgcat
ccagggatgtatgggctgccccggccgtggtacttccccctgcagaagtcctattggctg
ggcagtgggcgtgtggagacgtgggagtggccttggggaggagcagccaggctgagtgtc
atggaagaggaccaggcatgtgccatggaacaccggcgatctgaggagatgcgtggtatg
gaagaggagcccagccacctgcccctggtggtgtgtatagacaagctgaccaaggtgtac
aagacgggcaataagctggccctcaacaagctaagcctcaaccttcatgagaaccaggtg
gtctccttcctgggtcacaacggagccggcaagacaaccaccatgtctattctgacaggt
ctgttcccgcccacctcgggctcagccaccatctacggccatgacatccgtactgacatg
gagcgtatcaggcagaacctgggcatgtgtccccagcacaacgtgctttttgacaagctc
agtgtggaggagcacctgtggttctactccaaactcaaaggcatggccgaggaggacatc
cgcaaggagatggacaagatgatcgaggatctggagctgaataataaacgccacagcctg
gtccagactctgtctggaggaatgaaacggaaactgtctgtagccatagcgtttgtgggc
ggctcccgggcagtcatcctggatgagcccacggcgggtgtcgacccttacgcacgcaga
gccatctgggacctcatcctcaagtacaaacagggccgcaccatcctgctgtccacccac
cacatggatgaggctgacctgttaggagaccgcatagccatcatctcccatgggaaactc
aagtgctgcggctccccactctttctcaagagcacctatggagacggctacaaactcacc
ctggtcaagaaacagagtgagagcggcgaccaggtcacccagcctccattcttccggtct
ccctgctcctcctcctccctgtctccctccttttccctgtccccctcctccctgtctccc
tgctcggaggcccgggtcaccaagttcatccgtcagttcgtggggtcctgtctgctggtg
tctgactccaacactgagctgtcctatgtgctgccttcggaggctgtcaagaagggctgc
ttcgagaggctctttcaggcgttagagcagagtctggacctcctggctctgaccagcttc
ggggtgatggacaccactctggaggaggtcttcctcaaggtgtcagaggaggaccagtcc
ctggagaacagtgatgctgacatgaaggattccccgggcggtagctcagtggggaagcct
gctgctgcggtggtgggtctgggggcctctgggccgcagggtgatggcccggggcccggg
ggtcctgcaggaggcagcagcagtgtgctgagaccaggggtagagctcagtaacctgcta
aactgctccaggctcagccagagtcagtcgtccctgcgctcatcctcctccctggggtcc
gtacggggagacgagggggggctctacacagacttctatggagactactgccccctcttc
ggcaacggacaagaccctgactctaccagcctgacggcggaagtggatgagacctctggc
cctgagcagcctgtggtcctggaggaccagggcagcgtcaagctggagggttggtggctg
aagctacgtcaattccatggcctcatcgtgaagaggttccactgtgccaagaggaacacc
aagggtcttttctctcagatcctgctgcctgcattcttcgtctgtgtggccatgaccgta
gccctgtcggtgccttccatcggagatctgccaccattggtcttgtctccatcccagtac
cacaactacacccagcctcgtggcaacttcatcccctacgccaacgaagatcgcccacag
tacagcagtaaactatccccagacgccagccctcagaagatcgccaacacgctccgtctg
ccttctggcgtgggcgccacctgcgtcctcaaaacgcccttcaacagcaccctggaccag
ctggcacagacgctcaaccccagtgccaacaactccaaaaccctagctgctcgctacttt
gactccatgtgtctggactccttcacccagggagtgcccttgtccaacttcgtaccccct
cccccctcgccagctccctcagatgaccccgaccctcgttttgaggatagactgtggaac
ttcactgctaccactcttaccactgtacgggaaacagtgacctctccccccaccttgcct
ctgtctatccgggagccggttcgttgtatctgctccatgcaggggacgggcttctcctgc
cccagtggggtcggggggcggccgccccttatgaaggtggtcactggggacattctggtg
gacatcaccgggcgcaacgtgtcagagtacctcctctacacctctgacagactgcgcctg
cacagatatggaggactcactgtaggcaacatacagaaatcagtcccagcatcctttggg
aaaaataatccgcccatggttcgcaaaatagccgtgcgtagatcagctcaggtgctgtac
aataataaagggtaccacagcatgccaacctatctcaatgtcctcaacaacgccatcctg
cgtgccaacctgcctccaggcaagggcaaccctgctgcatacggaatcaccctgaccaac
caccctatgaaccgtaccagtgcaaggctctctttggactacctgctccagggcactgat
gtggtgatagccatcttcatcattgtggccatgtcctttgtaccagccagctttgtggtc
ttcctagtggcagaaaagtctaccaaggcgaagcacctgcagtttgtctctggatgtgac
ccagtcatctactggctggccaactacgtatgggacatgctgaactacctggtgccagcc
acgtgctgtgtccttatcctgtttgtctttgaccttcctgcgtacacatccccaaccaac
ttccccgcggtcctctctctcttcctcctctacgggtggtctataactcctgtcatgtac
cctgcctccttctggttcgaggtgcccagcacggcctatgtgttcctcatagtcatcaac
ctcttcataggaatcactgccactgtagccaccttcctgctgcagctctttgaacatgac
aaggatctgaaactggtgaacagctacctaaagtcctgtttccttatcttcccaaattac
aacctgggtcacggcctgatggaaatggcctacaacgaatacatcaatgagtactatgct
aaaataggtcagtttgacaagatcaagtctccatttgagtgggatattgtgactcgaggg
ctggttgccatgacaatcgagggctttgtaggcttcttcataaccatcctgtgccagtac
aacttcctcaggaaaccctcgagagtaccagtcagcagccagcccatagaggacgatgat
gaggatgtggcctctgagagaaggagagtactgagaggagaagctgacaacgacatgctg
aagattgacaacctcaccaaggtgtacaaatcgaggaagatggggcgtatcttggctgtg
gaccggctatgtttgggcgtgcgtcctggggagtgtttcggcctcctgggtgtgaacgga
gcagggaagactaccaccttcaagatgctgactggagacgagagcaccacgggaggagag
gccttcataggggggagcagtatcctgaaggagctgttgagggtgcagcagagcattggc
tactgtcctcagtttgacgccctgtttgaagacctgacagccagagagcacctggagctg
tacacacggctccggggcatcccctggaaggacgaggaaagggtggtctcatgggccctg
gagaaactggagctgtccaagtatgcagacatgcccgctggcacctacagtgggggaaac
aagcgcaagctgtccactgccatcgccctcatcggatacccctctctcgtattcctggat
gaacccactacagggatggatcctaaggcccgcagattcctctggaacctcatcctcgac
atcctcaagacgggacgctctgtggtgctgacatcacacagtatggaggagtgtgaggct
ctgtgcaccagactgggcatcatggtcaacggcaggttcaaatgcctgggaagcatccag
cacctcaagaacaggtttggtgatggttatatgatcacagtccggaccaagaccagttcc
agtgtgaaggaggtggtgagattcttcaacaggaatttccctgaggctgtactaaaggag
agccaccacactaaggtccagttccagctgaagtcagagaggatctccctggcccaggtg
ttcagtaagatggagcaggtagtcgaggtgctgggaatagacgactactctgtcagccag
accacactggacaacgtatttgtgaactttgcaaagaagcagagcgacaacctggagcag
caggagagttcgccccctggtggaggccagtcgccactgcagcgcctgctaaccctgctc
agaccccggctggccaacacggaactcgacgccctggtcagcgaagaaccggaggaacta
gagagtgatgacgatgagggcctcatcagcttcgaggaggagagggtgcagctctccttt
aacacagatacactctgttga
DBGET
integrated database retrieval system
