Oncorhynchus keta (chum salmon): 118357997
Help
Entry
118357997 CDS
T09424
Name
(RefSeq) protein fem-1 homolog C
KO
K25805
protein fem-1 homolog A/C
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118357997
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
118357997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ank_KRIT1
ANK_LRRK2
TPR_12
TPR_NPHP3
TPR_10
TPR_2
Motif
Other DBs
NCBI-GeneID:
118357997
NCBI-ProteinID:
XP_035591228
LinkDB
All DBs
Position
25:1397062..1402093
Genome browser
AA seq
615 aa
AA seq
DB search
MDLQTAVFNAARDGKLRLLQKLLENKTGLEVTKLMSEKTNGATSLLMAARYGHLDLVEYL
LECCCAPVEVGGSVNFDGETIEGAPPLWAASAAGHLKIVQSLLGHGASVNNTTLTNSTPL
RAACFDGHLDIVKYLVEHKADLEVANRHGHTCLMISCYKGHKEIAQYLLEKDADVNRKSV
KGNTALHDCAESGSLEIMKMLLKYGATMERDGYGMTPLLSASVTGHTNIVDYLTQHQQTN
HMERINALELLGATFVDKKRDLLGALKYWKRAMDLRYSDSKNVLNKAEPKQLIMAYDYAR
EVSNGEELDSLISDPDEMRMQALLIRERILGPSHPDTSYYIRYRGAVYADSGNFERCINL
WKYALDMQQSNLDPLSPMTASSLLSFAELFSFMLQDRAKGLLGTSVSFNDLMGILSKSVL
EIERAVKQTHPDPAQLSKALSIILHLICLLEKVPCTVEQDHFKKETIYRFLKLQPCGKNG
YSPLHLAVDRNTTCVGRYPVCKFPSFQVTSILLECGADVNCRDEDNNSPLHVAASNNHPD
IMNLLIACGTHFDSTNSLKQTACDLLDEKEMAKNLIQPINHTTLQCLAARAIIKHCLGYR
GNIPEKLEAFVLLHR
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggatttacaaacggcggtgttcaatgcagccagagatggcaagctacggttgcttcag
aaacttttggagaacaaaactggcctagaggttaccaaattaatgtcagagaaaaccaac
ggtgcgacctctttgcttatggctgcaagatacggacacctggatttagtggaatatctt
ttggagtgttgctgcgcacccgttgaggttggggggtcagtgaattttgatggagagact
atcgaaggtgccccccctctatgggctgcctcagcagcaggacacctgaaaatcgtgcag
tctttacttggccacggtgcctctgtgaacaatacaacactcaccaattccacccccctg
agagcagcctgcttcgatgggcatctggacattgtaaaatacctggtagagcacaaggca
gacctggaagtagcaaacagacatggtcacacatgcctcatgatctcgtgttacaaagga
cacaaggaaattgcccagtatctattggagaaagacgctgatgttaacaggaaaagtgtt
aaaggtaacacagcattacatgactgtgctgaatctggcagcctggagataatgaagatg
ctgctaaaatatggtgccaccatggagagggatggttatggaatgaccccactgctgtct
gctagtgtgactggccacactaacattgttgactatctgacacaacaccagcaaacaaac
cacatggagaggataaatgccctcgaactgcttggtgctacttttgtggacaaaaagagg
gatcttcttggggcattaaagtactggaagagggccatggacctgagatacagtgacagc
aaaaatgttcttaacaaagctgagccaaagcagttgatcatggcctatgactatgccagg
gaagtaagtaatggggaggagctagacagcctgatctcagaccccgatgagatgaggatg
caggccctgctcattagagaacgtatcctgggcccctcccaccctgacacctcttactac
atccgctaccggggagctgtatacgctgactctgggaattttgagcgctgcatcaacctt
tggaagtatgcccttgacatgcagcagagcaacttggaccccctcagccccatgacagcc
agcagcttgctgtccttcgctgaactattctccttcatgctccaggaccgtgctaaaggc
cttctgggaacctcggtctccttcaacgacctcatgggcatcctcagtaagagcgtgctg
gagattgaacgtgcggtaaaacaaacccatcctgacccggctcagctcagcaaggccctc
tccatcatcctgcatctcatctgcctcctggagaaggtcccctgtaccgtggagcaggac
catttcaagaaggagaccatctacaggttcctcaagctgcagccctgtgggaagaatggc
tacagccccctccacctggccgtggacaggaacaccacctgcgtgggccgctatcctgtc
tgtaagttcccctctttccaggtcacctctatcctactggagtgtggggcggacgtcaat
tgccgcgacgaggacaacaacagccccctgcatgtggccgcttccaacaatcacccggac
atcatgaacctgctgattgcctgcggcacgcactttgacagcaccaactccctgaaacag
actgcctgcgacctgctggacgagaaggagatggccaagaacctgatccagcccatcaac
cacaccaccctgcagtgtctggctgcacgggctatcatcaagcactgcctcggctacaga
ggaaacatcccagagaagctggaggcctttgtgcttctccacagataa
DBGET
integrated database retrieval system
