Oncorhynchus keta (chum salmon): 118357998
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Entry
118357998 CDS
T09424
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM36-like isoform X3
KO
K12013
tripartite motif-containing protein 36 [EC:
2.3.2.27
]
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118357998
04121 Ubiquitin system [BR:
oke04121
]
118357998
Enzymes [BR:
oke01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118357998
Membrane trafficking [BR:
oke04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
118357998
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118357998
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
zf-B_box
zf-RING_UBOX
SPRY
ANCHR-like_BBOX
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
zf-C3HC4_3
RING_XB3-XBAT31
zf-RING_5
zf-RING_2
TRIM_CC
U-box
Motif
Other DBs
NCBI-GeneID:
118357998
NCBI-ProteinID:
XP_035591229
LinkDB
All DBs
Position
25:1423222..1446959
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AA seq
746 aa
AA seq
DB search
MSAVSRRNSILPVPIKNIERELICPICKELFTHPLILPCQHSVCHKCVRELLLLNHEDSF
DAGSECSLPGSPGPRSRVPSPSMERLDRLARSATLQRRSFGRRGSMSSPGWRRGSVTPRI
TTFPCPGCQHDVDLGERGMSMLFRNFTLESIVERYRQAARAAVAIMCNMCKPPQQEATKS
CMDCKASYCNECFKFHHPWGTPKAQHEYVGPTMNFRPKVLMCPEHEMEKVNMYCEVCRRP
VCHLCKLGGSHANHKVTTMSSAYKILKEKLSKAIHYLISKEDQVKTQISHLEVLINETEE
KGQLVERRTDEKFERLFETLQERKFEMLRSIEQSRTRRLDQLRGQVDEYQGMLENSGLVG
YAQEVLKETDQSCFVQTAKQLHTRIAKSTESLRTFHPVADPSFDEFVLDTSREETLLKEL
CFGGVPDPPIIDLSRSRVYNEGLVCWQLAEDTLATDHQVLEYRKLGVEQDEEEGGSRWRP
TVPVYGPSTVVCDLEANSLYSFRVRSCRNSFFYSPYSPEVTFHTPPAPVFGFLFNDKCGF
SSERLTLSKLRDSVESAAGMAFLLAAERVQTGSYMGLDYIIGDTGISQGRHYWAFRVEPH
SYLVKVGVASDSKLLEWIHNPRDTSSPRYDHDSGHDSGSEDTCYDLSQPFTLLTVGMGKV
FIPKASISSATAGNDHGNRVLPMPQRIGVYLDYEAGRVYFYDANTMRCLYERQVDCTGTM
YPAFGLMGSGKVHLEEFIAAKRLSYM
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcagtctcgcgacgtaactcaattttgccggtccctatcaagaatattgagcgc
gaactaatttgtccgatctgcaaggagctgtttacacaccccctcatcttgccctgtcag
cacagcgtttgtcacaagtgtgtccgagagctgctgctattgaaccatgaggattctttc
gatgcaggctcggagtgttccctccctgggagcccagggccccgatccagagtgccctcg
ccaagcatggagaggctggataggcttgcaagatcagccacactgcagagaaggtcgttt
gggaggagaggctctatgtcctcaccaggatggaggcgtggctccgtgaccccccgcatc
accactttcccatgcccgggttgccaacatgacgtggacctgggcgagcggggcatgagc
atgctcttccggaacttcaccctggagagcatcgtggagcgctaccggcaggcggcccgt
gctgctgttgcgatcatgtgcaacatgtgcaagccgccccagcaggaggctaccaagagc
tgcatggattgcaaggccagctactgcaatgagtgcttcaagttccaccacccctggggc
acccccaaagcccagcacgaatacgtgggtcccaccatgaactttaggcccaaggtgctg
atgtgtccggagcatgagatggagaaggtcaacatgtactgtgaggtgtgccggcgtcca
gtctgtcacctgtgcaagctgggaggctcccacgccaaccacaaggtcacaaccatgagc
agcgcctacaagattctcaaggagaagctatcaaaggctatccattacttaatcagcaaa
gaggaccaagtgaagactcagatttcccacctggaggtgttgatcaatgaaaccgaggag
aaaggccagttggtggagcgtcggaccgacgagaagtttgagcgactgttcgagaccctc
caggagaggaagtttgagatgctgcggtccatcgagcagtcgaggacgcggcgtctggac
cagcttcggggccaggtggacgagtaccagggcatgttggagaacagcggcctggtgggt
tatgcccaggaggttctcaaggagacggaccagtcctgctttgttcagactgccaagcag
ctgcacaccaggatcgcgaaatccaccgagtctctgaggacattccaccctgtggccgac
ccctcctttgatgagtttgtgctggacacttccagagaggagaccctgctgaaggagctt
tgttttggtggagtccctgaccctcccatcatcgatctgtcccgcagtcgcgtctacaac
gaaggcctggtgtgctggcagttggctgaggataccctggccacagaccaccaggtgctt
gagtacaggaagctgggtgttgagcaggacgaggaggagggcggcagccgctggcgcccc
acagtcccggtgtacggccccagcacagtggtgtgcgacctggaggccaacagcctctac
tcgttcagagtacgcagctgccgcaactccttcttctacagcccctacagcccagaagtc
accttccacacaccacctgctccagtgtttggcttcctgttcaatgacaagtgtggcttc
agctcggagcggctgacgttgagtaagctgcgtgactcggtggagagtgcggccggcatg
gccttcctgctggctgctgagcgcgtgcagacaggcagctacatgggcctggactacatc
atcggtgacaccggcatctctcagggcagacactactgggctttccgcgtggagccccat
tcctacttagtcaaggtgggcgtggcctctgattccaagctgctggagtggatccacaac
ccccgggacactagtagccccaggtacgaccacgacagtgggcacgacagtggcagcgag
gacacgtgctacgacctgtcccagcccttcaccctgctcaccgtgggcatgggcaaagtg
ttcatccccaaagcatctatctcctccgccaccgccggcaatgaccacggcaaccgggtg
ctgcccatgccccagcgcattggcgtgtacctggactatgaggcgggccgtgtctacttc
tacgatgcaaacaccatgagatgcctttacgagcggcaggtggactgcaccggtaccatg
tatcccgcgtttggcctcatgggtagtggcaaggtccatctagaggagttcatcgcagca
aagcgactgtcgtatatgtga
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