Oncorhynchus keta (chum salmon): 118358002
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Entry
118358002 CDS
T09424
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1A-like isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oke03036
]
118358002
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
118358002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
CUE
ERCC3_RAD25_C
HHH_3
T2SSK
Motif
Other DBs
NCBI-GeneID:
118358002
NCBI-ProteinID:
XP_035591239
LinkDB
All DBs
Position
25:2181380..2201203
Genome browser
AA seq
1023 aa
AA seq
DB search
MSLFNLERFRFDKNKPTSNQDKYSGSVCPESGKENTPARVTTPVSNLGKPGRGVVFEDVI
SDSDDLASDSRSDKLTHRVTEPVKESLKREVREMTETSDKEDKMDKDLEERLAKLQEIFP
QRHRKELLEGIKSTSTLDGAVASCLMFGDKDSTRKRKQDGSSSSQDSDVVSQPSKKRRSS
LVRKPEDSEEGAEPSWERREAMVRKLQRKFPDQDKEELRSVLQEHEWNVDDALEVLRMFS
DPDDDSSAPEVSSSPEVKQKELNAKSNAKPSKAKSDAKPSRDRWESKDSKEEARRSNAST
LTWLFKKPAPESRPNSSSSSSTSTSQKLSNGTSVAKKEASERKRKVLASYERASSSEDED
TEGASSEFEGEDDELDFVAEDAGTSTLKGQILSFFQEASLDELSLIAGCSLKKAQKIVEL
RPFAVWQDLEEVFHKENGLSAELLLGCRVVLRERAVVQGLMSKCQTISGKMVKGVTQVID
KDMGSMTQPSVLNRELQLKPYQLIGLKWLLLLHQHKLNGILADEMGLGKTIQAIAFLGRL
HQDGIDGPHLITVPSSTLDNWVRELKLWCPSLKVLVYYGSVEDRRYLRHDILSNQVDFNV
IVSTYSLAIGNDSDRSLFRKLRLKYAVFDEGHMLKNMNSLRYRHLMAINAEHRLLLTGTP
LQNNLLELMSLLNFIMPSMFSSSTTQIAKMFSMKSHEEQSRFERDRIAQAKLIMKPFILR
RVKSEVLKQLPAKEERLEFCTMSEKQQLLYQNMVVKLKKSAIGEKKVLCNVMMQLRKMAN
HPLLHRQYYTTERLEAMSHLMLKEPTHLDADPVLIQEDMAVMSDFELHRLCQQYSSLHKY
QLEKDLLLDSGKFHLLQTLLATLKTKGDRVVLFSQFTMMLDIVEILLKHLGHRYVRLDGS
TPIADRIVLIDDYNMDPEIFVFLLSTRAGGLGINLTSANVVIMHDIDCNPYNDKQAEDRC
HRLGQTRTVQVIKLIHKDTIEGGMLQLGQKKLKLEQDMTAAEEGDEGTMSEDMAVLLKAS
LGL
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgagtctatttaatttagagcggtttcgttttgacaagaataaaccgacatcaaaccag
gacaaatacagcggttccgtatgtccagagtcgggaaaggagaatacaccagcccgagta
acaacacctgtatccaaccttggaaaacctgggcgaggagtagtatttgaagatgtcatc
agtgactctgacgatttggcaagtgactcgagaagtgataaattaacacacagggtgacg
gaacctgtaaaggaatcactgaagcgagaggtaagagagatgactgagacatctgataag
gaagacaaaatggacaaggatctggaagagagactggccaaactgcaggaaatcttccct
caaagacacaggaaggagctgctggaggggattaaaagcacaagcactttggatggtgcc
gtagcctcatgcctgatgtttggtgacaaagactcaacgcgaaagaggaaacaggatggc
tccagcagttcccaagacagcgacgtggtttcgcagcccagtaagaagaggagatcgtct
ctggtaagaaagcctgaagactctgaggagggagcagagcccagctgggagagacgggag
gccatggtcaggaaactgcagaggaagttccccgaccaggataaggaggaactgaggtcc
gtgctccaggaacatgagtggaacgtggatgatgccctggaggtgctgcgcatgttctcg
gacccagatgacgactctagtgcacctgaagtatccagctcccctgaagtcaagcaaaag
gaactgaatgccaagagtaatgccaaaccaagcaaagcaaagagtgatgccaagccgagc
agagaccgttgggagtctaaggatagcaaggaggaggccaggcgaagcaatgcttccact
ctgacatggctgttcaagaaaccggcacctgaatctaggcctaactcctcgtcctcctct
tcgacttctaccagccagaagctctccaacgggaccagcgtggctaagaaggaggcgtcg
gagaggaagaggaaggttctcgcctcctacgaaagggccagcagctcggaggatgaggac
actgaaggggccagcagtgagtttgagggcgaggacgatgagctagattttgtggcggag
gacgcgggcacatccacgctcaaaggccagatcctgagcttcttccaggaggcctcgctg
gatgagctgtccctcatcgccggctgctcgttgaagaaggcccagaagattgtggagcta
cggccctttgctgtttggcaggacctggaggaggtgttccacaaagagaatggcctgtct
gcagagctgctgctgggctgcagggtggtgctgagggagagagccgtggtccagggcctc
atgtccaagtgccagaccatctccggcaagatggtaaagggagtcacccaggtcatagac
aaggacatgggctccatgacccagccctcagtcctcaacagagagttgcagttgaaaccc
taccagctgattgggctgaagtggcttctcctgctgcaccaacacaagctgaatggaatc
ctggctgacgagatgggtttgggaaagaccatccaagccatagccttcctgggcagactg
caccaggacggcatcgacggcccccacctcatcactgtgccctcctccacccttgataac
tgggttcgtgagctaaagctgtggtgcccttctctcaaggtgttagtctactacggctct
gtggaggaccggcggtacctgcgacatgacatcctcagcaatcaggtggacttcaacgtc
atcgtgtccacctacagtctggccatcggcaacgacagcgaccgcagtctcttccgcaag
ctcagactgaagtatgccgtgttcgacgagggccacatgctgaaaaacatgaactccctc
cgttaccgccacctcatggccatcaacgcggagcaccggctgctcctgaccggcacccct
ctgcagaacaacctgctggagctgatgtcgctgctcaacttcatcatgccctccatgttc
tccagcagcaccacgcagatagccaagatgttctccatgaaatctcacgaggaacagagt
cgttttgagagggaccgcatcgcccaggctaaactcatcatgaaacctttcatcctcaga
cgagttaagagcgaggttcttaagcagctgccagcgaaggaggagaggctggaattctgc
accatgagcgagaagcagcagctgctttaccagaacatggtggtcaagctcaagaagtct
gccatcggagagaagaaagtgctgtgcaacgtgatgatgcagttgaggaagatggccaac
caccctctgctccaccggcagtactacaccacagagcgactcgaggccatgagtcacctc
atgctcaaggagccgacccatttggacgcggacccggtgctgatccaggaggacatggcg
gtgatgtcggactttgagcttcaccggctgtgccagcagtactcgtcgctgcacaaatac
cagctggagaaagacctactgctggactccgggaagttccacctgctccagacgctactg
gccacacttaagaccaagggagaccgagtggtactcttcagtcagttcaccatgatgctg
gacattgtggagattctgcttaaacacctgggccaccgctacgtccgactggatggctcc
acacccatagcagacaggatcgtgctgattgacgactacaatatggacccggagatcttt
gtgttcctactgtcgacgcgggcgggcggcctgggcatcaacctgacctcggccaacgtg
gtcatcatgcacgacatcgattgtaacccctacaacgacaagcaggcagaggaccgctgc
cacagattgggccagactaggactgtccaggtgatcaaactgatccataaggacaccata
gagggtggcatgctgcagctgggccagaagaagctcaaactggagcaggacatgaccgct
gccgaggagggtgatgagggcaccatgtctgaggatatggccgtcctcctcaaggcatcg
ctgggcctgtga
DBGET
integrated database retrieval system
