Oncorhynchus keta (chum salmon): 118358058
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Entry
118358058 CDS
T09424
Symbol
pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03030
DNA replication
oke03410
Base excision repair
oke03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
118358058 (pole)
03410 Base excision repair
118358058 (pole)
03420 Nucleotide excision repair
118358058 (pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oke03032
]
118358058 (pole)
03400 DNA repair and recombination proteins [BR:
oke03400
]
118358058 (pole)
Enzymes [BR:
oke01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
118358058 (pole)
DNA replication proteins [BR:
oke03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
118358058 (pole)
DNA repair and recombination proteins [BR:
oke03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
118358058 (pole)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
zf-RRPl_C4
Motif
Other DBs
NCBI-GeneID:
118358058
NCBI-ProteinID:
XP_052334520
LinkDB
All DBs
Position
25:complement(7339086..7366327)
Genome browser
AA seq
2292 aa
AA seq
DB search
MVFQNSGRYKSERGQGGDQDNQQDDRSSMSAAIRLERSQFTDEMDTRFGFERMKDPGEKT
GWLINMHPTEILDDDKRMVSAVDYYFIQEDGSRFKVPLPFKPYFYIATKKNCEREVISFL
SKKFQGKVAKLEMLPKEDLDLPNHLVGLKRSYIKLSFNTVDDLMKVKREISPAVRKNREK
EKSNDTYTSMLSSALAGGSVSAADEDGMSKKTSDQMDNIVDMREYDVPYHVRLSIDLKIH
VAHWYNVRYRGSAYPPEIILRSDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYM
IDGQGYLITNREIVSEDIEDFEFTPKPEYEGPFTVFNEPDEAGLIQRWFEHVQETKPEIF
VTYNGDFFDWPFVETRAAHHGLNMYREIGFQKDNQGEYRASQAIHMDAFRWVKRDSYLPV
GSHNLKAAAKAKLGYDPVELDPEEMCRMATEESQTLATYSVSDAVATYYLYMKYVHPFIF
ALCTIIPMEPDEVLRKGSGTLCEALLMVQAYHANIVFPNKQEQVFNKLTDDGHVMDSETY
VGGHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVEETLRHAIEEEEKIPLEQVTNFNEV
CDEIKKKLLSLKEVPNRIECPLIYHLDVAAMYPNIILTNRLQPSAMVDEATCAACDFNKP
GANCQRKMSWQWRGEIMPASRSEFHRIQQQLESEKFPPLFPNGRPRAFHELNLEEQARHE
KKRLGDYCRRAYKKVRQTKLEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKL
SAAQESGDAALVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCYTG
ANIITQARELVEQIGRPLELDTDGIWCVLPNTFPENFVVKTSNEKKPKVTISYPGAMLNI
MVKEGFTNDQYQELVDPASLTYETRAENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVF
NEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGTTLEEVYDSVAKVADYWLDVLYS
KAANMPDAELFELISENRSMSRKLEDYGEQKSNTISTAKRLAEFLGDQMVKDAGLSCRYI
ISRKPEGTPVTERAIPLAIFQAEPSVKKHFLRKWLKMPSLHDLDIRSILDWSYYIERLGS
AIQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDIYKQKKISELFTSEGKRQVAHHA
LEAGQAADIEDFGMPARPLQPAILISTKRKRVSQGENSQAVESQEMELTQSWREILGPPP
PTGETQEARLVWLRYHKKKWELQLRQRKERRKRRRLLDGEVQAMGGGVIRDAGPATGLGS
FLRRTARSILDMPWQIVQIAETSHPGLYKLWAVIGSDLHCMKLNIPRVFYVNQKVPKQEE
GATYKKVNRLLPRSNVVYYLYQYSVPEDMYQEHINEINADLSAPDIEGVYETQVPLLFRA
LVQLGCMCMVNKQLVRDLGGREAETYDLEHLEMRSLAQFSYLEPGSVRHIYLYHHSQGHK
ALFGLFIPSQRKASIFVLDTVRSNQMPNLNTLYGAERTALLEKTSEELLPPEKHTFEVRA
ENDVKAIHRALQRILLNYKGERRGPTLVAVQSNWELRRLVAGMPVLEEFPVVPVHVVDEI
NYNVLDWQRHGARRMVRHYLNLDSCLSQAFDMARYYHLPVGNLPHDVSIFGSDLFLARHL
RKHNHLLWLSPTARPDLGGKEADDSRLVMEADDRGSMEINAQGCYSTVCVELDLQSLAVN
TILQSQHVNDMEGGASLGVSFDVIQQASLEEMMSGNQGASAVASYDETALCSNTFRILKS
MVVGWVREITRYDNVYADNQVMHFYRWLRSPSSLLYDPALHRTLHNMMKKVFLQLVAEFK
RLGSTVVYGNFNRILLCTKKRRIDDAIGYVEYITNSIHSREIFHSLSISFSRCWEFLMWM
DLANYGGVKGKLPSSVLYGENGTAQKKAKENGEEEGSEDEEEEADEEDGAGEVDEVEELI
ESSWNIMQYLPQTASCQKYFLMIISAYIAAIYHSMQEELRRNAPGATPIKRRGGSQTSQQ
AAGDSTALPGMISFSQEYVSSELTQNFFTITQKIQKKVTGTRSVTQPSEMFPVLPGSHLP
LSNPALEFIKYVCQVLSLDANIVNQVNKLKRDLLRLVDVGEFSEEAQFRDPCNSYILPEV
ICHHCNFCRDLDLCKDPSVAQDGSVFPQWFCSNCQTQYETESIEMALVEALQKKLMSYTL
QDLACAKCKGVKEANMPLYCTCAGDFELTFPTKSFSEQIKVFRNIAAHYNMNFLEETIDW
LLVMSPQISQSR
NT seq
6879 nt
NT seq
+upstream
nt +downstream
nt
atggtttttcaaaacagtggacggtacaagtcagagagaggacaagggggtgaccaggac
aatcaacaggatgaccggtcatccatgtcggctgctattcggctggagcgcagccagttc
acagacgagatggacacccgctttgggtttgagaggatgaaggacccaggagagaagact
ggctggctcatcaacatgcaccctacagagattctggacgatgacaaacggatggtcagc
gctgtggactattatttcatccaggaagatggcagcaggttcaaggtacccctccccttt
aagccctatttctacatagccactaaaaagaactgtgagagagaagtcatctcattcttg
tccaagaagttccaagggaaggtggcgaagctggagatgctccctaaggaggacctggat
ctgcccaatcacctggtgggactaaagaggagctacatcaagctttcattcaacactgtg
gatgacctcatgaaggtcaaacgggagatctcgccggcggtgcgcaagaatcgggagaag
gagaagtccaacgatacctacacctccatgttatcaagtgcgttggcaggaggcagtgtc
tcggcagcggatgaagatggcatgtccaagaaaacctccgaccagatggacaacatagtg
gacatgagagagtacgacgtgccttaccacgtgcgcctgtccatcgaccttaagatccac
gtggctcactggtacaacgttcgctacaggggtagtgcataccctccagagatcatactg
agaagcgacctggtggaacgaccagacccagttgtgctggcctttgacatagagaccacc
aagcttcctctgaaattccctgacgcagaaacggaccagattatgatgatatcctacatg
atcgacggacagggctacttgatcacaaaccgagagattgtctctgaggacattgaggac
tttgagttcacccctaagccagagtacgagggacccttcactgtattcaatgagccggac
gaggcgggtctcattcagcgatggttcgagcacgtccaagaaaccaagcccgaaatcttt
gtcacctacaacggagactttttcgattggccctttgtggagaccagggctgcccaccac
ggcctgaacatgtacagagagattggcttccagaaggacaaccagggcgagtacagggct
agccaggccatccacatggacgcctttaggtgggtgaagcgtgacagctacctgccggtg
ggcagtcacaacctgaaggcggcggccaaggccaagctgggctatgacccagtggagctg
gaccccgaggagatgtgccgcatggccacagaggagtcacagactctggccacttactct
gtgtcggatgccgtggccacgtattatctttacatgaagtacgtccaccccttcatcttt
gctctttgcaccatcatccctatggagccggatgaggtgctgcgtaagggttcggggacc
ctgtgtgaggcgctgctcatggtgcaggcctaccatgccaacatcgtcttccccaacaag
caggagcaggtgttcaacaagctgacagacgatggtcacgtcatggactctgagacctac
gtggggggtcacgtggaggccctggagtccggcgtgttccgcagcgacatcccctgccgc
ttcaaaatgaatccggcggcattcgacttcctgcttcagcgggtggaggaaactctgcgt
cacgccatcgaggaggaggagaagattcccctggagcaagtcaccaacttcaacgaggtg
tgtgacgagatcaagaagaagctcctctctttgaaggaggtccccaacaggatcgagtgt
ccgctcatctaccatctggacgtggcggccatgtaccccaacatcatcctcaccaaccgc
ctgcagccctctgctatggttgacgaggccacgtgtgctgcctgcgatttcaacaagccg
ggggccaactgtcagaggaagatgagctggcaatggagaggggagatcatgccggccagc
cgcagtgagttccaccgcatccagcagcagctggaatcagagaagtttcctccgctcttc
ccaaacggccggccgcgggccttccatgagctcaacctggaggagcaggcccgccatgag
aagaaacgcctgggcgactactgcaggagagcctataagaaggtccgccagaccaagctg
gaggagcgggtcaccaccatctgccagagggagaactccttctacgtggacactgtgcga
gccttcagagaccgtcgctatgagtttaagggactgcacaaggtgtggaagaagaaactg
tctgcagcccaggaaagtggtgacgctgccctcgtgaagcgctgtaagaacatggagatc
ctctacgattctctccagctagcccacaagtgcatcctcaactccttctatggctacgtc
atgaggaaaggggcccgctggtactccatggagatggctggcatagtgtgctacaccgga
gccaacatcatcacccaggccagagagctcgtggaacagatcgggaggcctctggagctg
gacacggatggtatctggtgcgtcctgcccaacaccttccccgagaactttgtggtgaag
actagcaacgagaagaagcccaaggtgaccatctcctacccgggcgccatgctcaacatc
atggtgaaggaaggcttcaccaacgaccagtaccaggagctggtggaccctgcctcgctg
acctacgagacgcgggcggaaaacagcatcttcttcgaggtggacgggccctacttggcc
atgatcctgcccgcctccaaagaggagggaaagaaactgaagaaaaggtacgctgtgttc
aacgaggacggctcgctggccgagctcaagggcttcgaggtgaagaggcgaggcgagctg
cagctcatcaagatcttccagtcgtctgtgttcgaggccttcctcaaaggcaccactcta
gaggaggtgtatgactcggtggccaaggtggccgactactggctcgacgtgctctacagc
aaggctgcaaacatgccagacgcggagctgtttgagctcatctcggagaaccgctccatg
tcgcggaagctggaggactatggcgagcagaagtccaacaccatcagcacggccaagcgg
ctggccgagttcctgggtgaccagatggtgaaggacgccgggctgagctgccgctacatc
atctcccgcaagccagagggcacgccggtcacggagcgggccatccccctggccatcttc
caagctgaacccagtgttaagaagcacttcctgcgcaagtggctgaagatgcccagcctc
cacgacctggacatccgctctatccttgactggagctactacattgagagattgggtagt
gccatccagaaaatcatcaccattccagctgccctgcaacaggtgaagaaccccgtgccc
agagtgcgccacccggactggctccacaagaagctgctggagaagaacgacatctacaag
cagaagaagatcagcgagctgttcaccagcgagggcaagagacaggtggcccatcatgcc
ctggaggcagggcaggcggctgacattgaggactttgggatgcctgcccgacccctgcag
ccggccatactgatcagcacgaagcgcaagcgggtgtcgcagggagagaacagccaggcc
gtggagtcccaggagatggagctcacccagtcctggagggagatcctcggccctccacca
cccactggggaaacgcaggaggcccgtctggtgtggctgcgctaccacaagaagaagtgg
gagctgcagctgcggcagagaaaggagcgccggaagcgccggcgcctgctggacggcgag
gtccaggccatggggggaggggtgatccgggacgcaggccccgccacaggcctgggtagc
ttcctccgccgcacggcgcgcagtatcctggacatgccctggcagatcgtacagattgca
gagaccagtcaccctgggctgtataagctgtgggctgtgatcggcagtgacttgcactgc
atgaagctcaacatcccgcgggtgttctacgtcaaccagaaggtccccaagcaggaggag
ggagccacatacaagaaggtgaaccgccttctgccgcgctccaacgtcgtctactacctg
taccagtactctgtccctgaggacatgtaccaggagcacatcaacgagatcaacgctgac
ctctctgccccagacatagagggggtctacgagacacaggtccctctgctgttccgggcc
ctggtacagctgggctgtatgtgcatggtcaacaagcagttggtccgggacctgggtggc
cgggaggctgagacgtacgacctggagcacctggagatgaggtccctggcccagttcagc
tacctggagcctgggagcgtccgacacatctacctttaccaccacagccagggccacaaa
gccctgttcggcctgttcatcccctcacagcgcaaggccagcatctttgtcctggacacg
gttcgcagtaaccagatgcccaacctgaacaccctgtatggggcagagcgtacagctctg
ctggagaagaccagcgaagagctcctgccccctgagaaacacacctttgaggtgcgggct
gagaacgacgtgaaggccatccaccgagccctgcagcgcatactgctcaactacaagggg
gagcgccgcgggcccaccctggtcgcagtgcagtccaactgggagctgaggcggctggtg
gcgggcatgccggtgctagaggagttcccggtggtgccggtgcatgtggtggacgagatc
aactacaacgtgctggactggcagcgccacggtgcccgccgcatggtccgccactacctc
aacctggacagctgcctgtcgcaggcttttgacatggccagatactaccacttgccggtg
gggaacctgccccacgacgtgtccatctttggttctgacctgttcctggccaggcacctg
aggaaacacaaccacctgctgtggctgtcccccaccgccaggcctgacctggggggaaag
gaggccgacgacagcaggctggtgatggaggctgatgaccggggctccatggagatcaac
gctcagggctgctactcaacagtgtgtgtggagctggacctgcagagtttggctgtcaac
accatcctgcagtcgcagcatgtcaacgacatggagggaggagccagcctgggcgtcagc
tttgacgtcatccagcaagcctcgctggaggaaatgatgtcggggaaccagggcgccagt
gccgtggccagctacgacgaaaccgccctctgctccaacaccttcaggatcctgaagagc
atggtggttggctgggtgcgggagatcacgcggtacgacaacgtctacgccgacaaccag
gtgatgcacttctaccgctggctacgctcgcccagctcgctgctttacgacccggcgctg
caccgcaccctacacaacatgatgaagaaggtattcctccaactggtggcagagttcaag
cggctgggctccaccgtggtgtacgggaactttaaccgcatcctcctttgcactaagaag
cggaggattgacgacgccatcggctacgtggagtacatcaccaacagcattcactcgcga
gaaatcttccactctctctccatctccttctcccgctgctgggagttccttatgtggatg
gatctggccaactatggaggcgtgaagggcaaactgccctccagtgtcctgtatggagag
aacgggacagcacagaaaaaggcgaaggagaatggagaggaggagggcagcgaggacgag
gaggaggaagctgacgaggaggatggagccggagaggtggatgaggtggaggagctgatc
gagagcagctggaacatcatgcagtatctgcctcagaccgcctcctgtcagaaatacttc
ctcatgatcatctccgcctatattgctgccatctaccacagcatgcaggaggagctaaga
cgcaacgccccgggagccacgcccattaagaggcggggcggaagccagacttcccagcag
gcagcaggagattccacagcacttcccggtatgatctccttctctcaagagtatgtgtcc
agcgagcttacccagaacttcttcaccatcacccagaagatccagaagaaggtgacaggc
acccggagcgtgacccagccctcggaaatgttccccgtcctgcctggctcccacctgcct
ctcagcaacccagcccttgaattcatcaaatacgtctgccaggtcctctccctggatgcc
aacatagtgaaccaggtgaacaagctgaagagggacctgctgcgtctggtagatgtgggt
gagttctcggaggaagcccagttccgagacccctgcaactcttacatcctgcccgaggtc
atctgccaccactgcaacttctgccgtgacctcgacctttgcaaggacccctcggtggca
caggacggctctgttttcccccagtggttctgctccaactgccagacccagtatgagact
gagtccattgagatggccctggtggaggccttgcagaagaaactcatgagctacactctg
caggacctggcttgtgccaagtgtaaaggagtgaaggaggccaacatgcctctttactgc
acttgtgcaggagactttgaactcaccttccccacaaagagtttctcagagcagatcaaa
gtgttccggaacatcgccgcacactacaacatgaacttcctggaagagaccattgactgg
ttactggtcatgagtccacaaataagccagtctcgatga
DBGET
integrated database retrieval system
