Oncorhynchus keta (chum salmon): 118358060
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Entry
118358060 CDS
T09424
Name
(RefSeq) ubiquitin-protein ligase E3B-like
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118358060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118358060
Enzymes [BR:
oke01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
118358060
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
HECT type E3
118358060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
DUF7462
Motif
Other DBs
NCBI-GeneID:
118358060
NCBI-ProteinID:
XP_035591364
LinkDB
All DBs
Position
25:7498796..7538168
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AA seq
1065 aa
AA seq
DB search
MFSAAQSSKSEFLDKARQAREERKGYKARDRAATLIQALVRRFLCRCRLQKQIRKEVDDL
FQDAGTTKRNALSIFKIARKLLFIFCQDDKLRFEKLCRSILGSMDVENEPKVWYVSLALS
KDLTIPWIKQIKDLLWISCQFLKKLKPDIMQDNKLVTLYLTMLVTFTDTSTWKIVRGKGE
ALRPALTRICENIMGHLNQKGFYSILQILLTNGLARSRPSLTKGTLTAVFTLALRPVIAA
HFSDNLLRSLLIHIMSVPAVVSHIYTITPECMTTIQTHDLLRKFILFLSCEEQCVDICVC
LEGSHTLCLLGNLIHLGYLNEKVLEEEANHFVTELTDMLSYCQRYVSQKKSNLTHWHPVL
GWFSQTVDYGLNESMPLVTKQLQYLWGMPVIRTLFSDVLSKKLEAQEPTPPPQPTTSQNN
LPVKSLFKRAFQKSASVRNILKPVGGRRVDSAEVQKVCSICVLYQTALTTLTQIRLQILT
GLTYLDDLLPKLWAFICELGPQGGLKLFIECLNNDTEESKQLLAMLMLFCDCSRHLITIL
DDIEVYEEQISFKTEELVTISSFLNTFVYKMVWDGILENAKGEKLDLFHSVHGWLMVLYE
RDCRRRFSPDDNWLRKDLKPSLLFQELEKGKRRAQLLLQYIPHVIPHKNRVLLFRNIVTK
EKETLGLVETSSASPHVTHITIRRSRMLEDGYDQLRRLPVNSIKGVIRVKFVNDLGVDEA
GIDQDGVFKEFLEEIIKKVFNPALNLFKTTSGNERLYPSPTSYIHENHLQLFEFVGKMLG
KAMYEGIVVDVPFASFFLGQVMGHHHSTFYSSIDELPSLDSEFYKNLTSIKRYDGDVGDL
GLTLSYDEDVMGQLVCHELIPGGKTMPVTNENKISYIHLMAHFRMHTQIKEQTAAFIRGF
RSIINPEWLHMFSTPEVQRLVSGDNAEIDLDDLKKHTVYYGGFHSSHRVIIWLWDILSSD
FSSEERAMFLKFVTSCSRPPLLGFAYLKPPFSIRCVEVSDDQDTGDTLGSVLRGFFTIRK
KEPGGRLPTSSTCFNLLKLPNYSKKSILRDKLRYAISMNTGFELS
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgtttagtgcagctcagagttccaagtctgagtttctggacaaagccaggcaggcacgt
gaggagaggaaggggtacaaagcaagggacagagcagccaccctaattcaagcgctggtc
aggagattcctctgtcgctgcagactccagaaacaaataaggaaagaagttgatgactta
ttccaagatgccgggaccacaaaaagaaacgcactatccatttttaaaattgcacggaag
ttactattcattttttgccaagatgataagttgagatttgagaagctttgtcgctccatt
cttggcagcatggatgttgaaaatgagcccaaagtttggtatgtgtcattggctctttct
aaagacctcaccatcccttggatcaagcagattaaagatctcctgtggatctcctgtcag
ttcctgaaaaaattaaaacctgacatcatgcaggacaataagctggtgactctgtacctc
accatgctggtgactttcacagacacatcaacctggaagatagtgagagggaaaggcgag
gccctcagaccagcattgacccggatctgtgagaacatcatggggcatctcaatcaaaag
ggattttattcaatactgcagattctactcaccaacggattggcacgctccagaccctca
cttaccaagggcacactcacagcagtattcacactggcattaagacctgtcattgctgct
cacttctctgacaacttgctgaggtctctcctcatccacatcatgtctgtcccagcagtt
gtctcccacatctacaccatcaccccagagtgcatgaccaccatccagacccacgacctg
ttgaggaagttcatcctgttccttagctgcgaggagcagtgtgtcgacatctgtgtctgc
ctggaggggagccacacactgtgcttactgggtaacctgattcacctgggctacctcaac
gagaaagtactggaggaggaggccaaccactttgtgacggaactgacggacatgctgtcc
tactgccagagatacgtgtcccagaagaaatctaacctcacccactggcaccctgtcctt
ggctggttctcccaaaccgtagactacggtctgaatgagtccatgccactggtcacgaag
cagttgcagtacctgtggggcatgcctgtgatccggactctcttcagtgatgtcctcagc
aaaaagctggaggcccaagagcccacgcctccaccacaacctaccacatcccaaaacaac
ctgccagtcaagagtctattcaagcgggcatttcagaagtctgcctcagtacgaaacatc
ctgaagccagttggtgggagacgggtggactccgcagaggttcagaaagtgtgcagtatc
tgtgtactgtaccagacagccctcaccacgctcacccagatacgactgcaaatccttact
ggcctaacctacctggatgacctgctgcctaagctgtgggccttcatctgcgaattagga
ccccaaggagggctcaagctgttcatagagtgcctgaacaacgacacagaggagtctaaa
cagctgctagccatgctcatgctgttttgtgactgctccagacacctcatcacgatcctg
gatgacattgaagtttacgaagagcagatctcgtttaagacggaggagcttgtaactatc
tcctcatttctcaacacgtttgtttacaagatggtctgggatggcatcttggagaatgcc
aaaggagagaagctggacctgttccacagcgttcacggctggctgatggtgctttacgag
cgggactgcaggaggaggttctcccctgatgacaactggctgcgcaaggatttaaagccg
agccttttgttccaagagctggagaagggcaagaggagagctcagctgttacttcagtac
atcccacacgtcattccacacaaaaacagggtcctgctgttccgaaacattgtcaccaag
gagaaggaaaccttgggattggtggagaccagctccgcctctccgcatgtcacccatatc
accattcgccgctcacggatgttagaggatggttatgaccagctccgccggttgcccgtc
aactccatcaaaggtgtgatccgcgtgaagtttgtcaacgacctgggtgtggacgaggcc
ggcatcgaccaggacggcgtcttcaaggagttcctggaagagatcatcaagaaagtcttc
aatccggctctcaacctctttaagaccaccagtggcaatgagaggctgtacccctcccct
acgtcctacatccacgagaaccacctgcagctctttgagtttgtggggaagatgctcgga
aaagccatgtatgagggtatcgtggtagacgtacccttcgcctccttcttcctcggccag
gtcatgggccaccatcacagcactttctacagctccattgacgagctgccctccctggac
tctgagttctacaagaacctcacctccattaagcgctacgacggggatgttggtgatcta
ggactgacgctatcgtatgacgaggatgttatgggacagctggtctgtcatgagctgatt
cctggaggaaagacgatgccagtcaccaatgaaaacaagatcagctatatccacctgatg
gcgcacttccgcatgcacacgcagataaaagagcaaacggcagctttcatccgagggttc
cgcagcatcatcaacccagagtggctgcacatgttctccacccccgaggtccagcgcctc
gtctccggggacaacgccgagatagatctggatgaccttaagaaacacacagtgtactat
ggaggtttccacagcagccatcgggtcatcatctggctgtgggacatcctgtccagtgac
ttctcctctgaggaaagggccatgttcctcaagtttgtcaccagctgttcgagaccaccc
ctcctgggttttgcctacctcaagccccctttctccattcgctgtgtggaggtgtccgat
gatcaggacacgggggacaccctgggcagtgtcctgcggggtttcttcaccatccggaag
aaggagcctggcggtcgcctccccacctcgtccacctgcttcaacctgctcaagctgcct
aactacagcaagaaaagcatcctgcgtgacaagctccgctatgccatcagtatgaacaca
ggttttgagctctcctaa
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