Oncorhynchus keta (chum salmon): 118358081
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Entry
118358081 CDS
T09424
Name
(RefSeq) BDNF/NT-3 growth factors receptor-like isoform X1
KO
K04360
neurotrophic tyrosine kinase receptor type 2 [EC:
2.7.10.1
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04010
MAPK signaling pathway
oke04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118358081
04020 Calcium signaling pathway
118358081
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
oke01001
]
118358081
Enzymes [BR:
oke01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
118358081
Protein kinases [BR:
oke01001
]
Receptor tyrosine kinases (RTK)
TRK family [OT]
118358081
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
I-set
Ig_3
LRR_8
LRRCT_2
Ig_2
C2-set_2
LRR_5
LRRNT
Haspin_kinase
ig
BiPBP_C
ICAM_N
Ig_5
LRR_NXF1-5
Sdh_cyt
Motif
Other DBs
NCBI-GeneID:
118358081
NCBI-ProteinID:
XP_052334538
LinkDB
All DBs
Position
25:8111203..8194316
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AA seq
799 aa
AA seq
DB search
MEGAEMSAFRRGSGVFLFGLCCVLMGLWRLGAACPASCSCSGTRIACVDQERGIMAFPVL
QSELEMDNITDIYIANQSSFSSINDKDLHYYRNLTNLTVTNSRLTYVSRLAFQNNLKLQY
LNLKDNNLSSLSWRIFRHLNISNLILSGNPLHCSCENIWMKLWLGEEADAQDLQCTAEGG
GRKPLTRLKLPHCMVPMATLSPSKVMVQEGADVVLTCNTSGEPSPELIWKMTPLISYYEI
ETSGQVSELHLYNLSSLDNNCKITCSAGNIVGENESTVLLNILFPPNISKLSDAYQDHHW
CIPFSMSGNPKPELRWLLDGEPVIEGPYIMTMIHDFSEREYHGCLQLDSPTHINNGPYTL
LASNKYGQDRKTVNAHFMHNPFEGGTVTEPLYYDDTPLDPPEDRVAVYVVVGIAAVAFTG
FLLMLVILKFGGNSKFGIKGASSVISNDDDSASPLHHVSNGSNTPSSSEMGPDAVIIGMT
KIPVIENPQYFRSNSMLKSDTFVQHIKRHNIVLKRELGEGAFGKVFLAECYNLSPELDKI
LVAVKTLKEASENARKDFHREAELLTNLQHEHIVTFYGVCVESDPLIMVFEYMKHGDLNK
FLRAHGPDSVMMGDGPTNRPVELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVG
ENLLVKIGDFGMSRDVYSTDYYRVSVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVL
WEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRTCPKEVYDLMLGCWQREPHMRHHIKEI
HSLLLNLAKASPVYLDILG
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggagggagccgagatgagcgcctttcggaggggtagtggggtgtttctgttcgggttg
tgttgcgtactaatgggactgtggaggctcggggccgcctgccccgcgtcctgctcctgt
agcgggaccaggatcgcatgtgtggaccaggagcggggtatcatggcttttcccgtgttg
cagtcggagctggagatggacaacattaccgacatatatattgcaaaccaaagtagcttc
tcgtccatcaatgacaaagacctgcattattaccggaacctcacgaatctaactgtgact
aacagccggcttacctatgtatctcgactggccttccagaacaacctcaagcttcagtat
ctgaatttgaaagacaacaacctgtcatctctgtcttggaggatatttcgacatttaaac
atatcaaatctgattctttcagggaacccgctgcactgttcctgtgagaacatatggatg
aagctgtggctgggagaggaggccgatgctcaggacctccaatgtacagcggagggtggc
gggaggaagcccctgaccaggctcaagctccctcactgcatggttcccatggcgactctg
agcccgtccaaggttatggtgcaggagggtgctgatgtggtgctgacatgcaacacctcc
ggagagccctctcctgagctcatctggaaaatgaccccactcatctcctactatgagatt
gagacctcgggccaagtgtctgagctccatctctataacctctcctccctggacaacaac
tgtaagatcacctgcagtgctgggaacattgtgggcgagaatgagtccacagtcctcctc
aacatcctctttccccctaacatcagtaagttgagtgatgcctaccaggaccaccactgg
tgcatcccattcagtatgtctgggaacccaaagcccgagctccgctggctgttagacggg
gagccggttattgagggaccctacatcatgaccatgatccatgacttctctgagagggag
taccacggctgcctgcagctggacagccccacacacatcaacaatggaccgtacaccctg
ctggccagcaacaagtacggacaggaccgcaagaccgtcaatgcccacttcatgcacaac
ccctttgagggaggaacagtgacagaacctctttactatgacgatacacctctagatcca
ccggaagacagagtggctgtgtacgtggtcgtagggattgcagcagtagccttcacgggt
ttcctcttgatgctggtcatcctaaaattcggggggaactcaaagtttggaatcaaaggt
gcatcgtctgtgatcagcaacgatgacgactcagcctctcctctccaccacgtgtccaac
ggcagtaacactccgtcctcctctgagatgggcccagacgccgtcatcatcggcatgacc
aagatccccgtcatcgagaaccctcagtacttccgtagcaacagcatgctcaaatcagac
acctttgtccagcacatcaagaggcacaatatagttctgaagagggagttgggagaaggg
gcgtttggcaaggttttcctggccgagtgctataacctgtctcctgagctcgacaagatc
ctggtggctgtcaagaccctaaaagaggccagtgagaatgcgaggaaggacttccatcga
gaggccgagttgctgaccaacctgcagcacgagcatatcgtcaccttctacggtgtgtgt
gtggagagcgaccccctcatcatggtgtttgagtacatgaagcacggggacctcaacaag
ttcctcagggctcacggtcccgactctgtgatgatgggtgacggtccgacaaaccgaccc
gtggagctgacccagtcccagatgctgcacatcgcccagcagatcgctgcaggcatggtc
tacctggcctcccagcactttgtccaccgagacctggccacacgtaactgtctggtggga
gagaacctgctggtgaagatcggtgacttcggcatgtcccgagacgtgtacagcacggac
tactacagggtaagtgtgggcggtcacaccatgctgcccatccgctggatgcctccagag
agcatcatgtacaggaagttcaccacagagagtgacgtgtggagtctgggcgtggtcctc
tgggagatcttcacctacggcaaacagccctggtaccagctttccaacaacgaggtgatt
gagtgcattacacaggggcgtgtcctgcagcggcctcgcacctgtcccaaagaggtgtac
gacctgatgctggggtgctggcagagagagccccacatgagacaccacatcaaggagatc
cacagcctactgctaaacctagccaaagcctctcctgtctacctggacatcctgggctga
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