Oncorhynchus keta (chum salmon): 118358126
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Entry
118358126 CDS
T09424
Name
(RefSeq) low-density lipoprotein receptor-related protein 2-like isoform X1
KO
K20051
low-density lipoprotein receptor-related protein 4
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118358126
Membrane trafficking [BR:
oke04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
118358126
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
EGF_CA
cEGF
hEGF
EGF_3
DUF4520
Motif
Other DBs
NCBI-GeneID:
118358126
NCBI-ProteinID:
XP_035591499
LinkDB
All DBs
Position
25:complement(10358544..10367405)
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AA seq
1501 aa
AA seq
DB search
MAFYLLLSISILEISVLSVAVRTPLKCNLGTKPCKDGSECILYQHVCDGEVDCRDGSDEE
DCTVTCTKGQFLCAHGKKCIDQRQVCDGVAQCQDRSDEVDCLEHMEGCAHHCDKTRCLPD
TFLCDGEKDCLDGTDEADCDSDSDGHKNHHDEVSENDSSNYKGITTMSAPAPLQCPFGMK
PCQDKTACVLYSHVCDGDADCKDGSDEETCSLECDNGQFQCAHGKKCIDQRQVCDGVAQC
QDRSDETRCLKPTEGCAHHCDNKTRCLPDTFLCDGERDCLDGTDEANCDSDSTDHKNHRY
FVAEDDDGTNEGNSTSMSVPAPLKCTFGTKPCKNNIECVLYSHVCDGEADCKDGSDEEEC
SLECGSGQFQCAHGKKCIDQRQVCDGVAQCQDRSDETHCLKPTEGCAHHCDNKTRCLPDT
FLCDGERDCLDGTDEANCADESCSSGEFRCTIGQCVSISMRCDGHPDCWDHSDEESCHKL
PQCTTNRRCPQSQECLLEEWVCDGEQDCKDGSDEENCEMVQLKCGEFQWACTSKSQCVPK
AWRCDGTKDCADESDEAGCGQVATCPSHQFQCANTSECLDMALVCNSVRNCADGSDEGGD
CKTTCPDKAICVQNCDSTPQGTRCGCKAGYQLDEDAVSCGDIDECVGGKRGVCSHSCVNT
QGSFHCHCNPGYLLESDGRHCKIMGEPYLLASVQTDLFLVGLRSSSLDVLVSSAKKAILS
VDYDWKDQRVFWVSLDSEGIKWSSLDQKKQGTLFKGIKSDCIAVDWVGRNLYWIDGIGGG
RIIAIGLNSTITSALDLTVILDKEFEQLLSLALLPQKGLLFWSEMSNEAKIERAGMDGSE
RRVVVSHSLGWPGSLAVDPIGERLYWTDKKLGCIGSATLNGGDVKILQLTETTNPFSVTV
FNDLLYWSDAKRGTIQGANKITGKNCKVLLKRSAQPFGLKVIHPLLQTSTDSPCEKLHCS
HLCVLAPGPKGVCKCPSGLLLAEDGLNCSNLVNSAFLLVLSPTVVTQIYLQTMLSAVGLK
TWPEHLSLPLANVNEAAILDYTLREKMLYLADSGQSSVGLFKLKETSLVPRGQFLQLKGD
TVTALALDWITLNVYWSSTKQSRLQVTSSNGEHTAVLIDDIGSLESIALHPLSGRLCFAK
QGEGAHVECAHMDGGKRVQVWKDAVQPTSLTFSNDGGEIYWADIGAGVIGSVRVDGSGYI
AFTTGDGLIAFALSNRMLLWVTDLDTTQVWYRDDQLIKTLWFEVNIEVVSLKAYSKSSQM
GFNFCSDGNGDCSHFCLAVPGGRTCRCAHGHRPVNATHCTLDQHCPAGSRPCLDGHTCLP
LEKFCDGHPDCLDTSDENCVHLKGQSEVQSKAPTLPPSPSIPTSADLGSTTSLDNSGLVR
NLDVKQQCSEKHCNGNGECVETNGGTSCACGQGYSGDSCQDQLANTMQGPLIYGAVGLCA
AIVVISVLVAVVRSKTANARRASPVVKQTSMIDLAKHGDSPSTQHSPDDTNFSEEVASSV
A
NT seq
4506 nt
NT seq
+upstream
nt +downstream
nt
atggctttctatctgcttctgagtatatcaattttggaaatctcagttttgagtgttgct
gtgcggactccattgaaatgcaacctgggcaccaaaccttgcaaggatggatctgagtgt
attctctaccagcatgtgtgtgacggtgaagttgactgtagggatggctctgatgaggag
gactgcactgtcacatgcactaaaggccagtttctgtgtgcccatgggaagaagtgcatt
gaccagaggcaggtgtgtgacggggtggcccagtgtcaggaccgttctgatgaggtggac
tgcctagagcacatggagggctgtgctcaccactgtgacaagacccgctgcctccctgac
accttcctttgtgatggagagaaggactgcctggatggcactgatgaggcagactgtgat
tcagactccgatggtcacaaaaatcatcatgatgaagtttctgaaaatgactctagcaac
tataaagggattaccaccatgtctgcaccagcacccctccaatgtccctttggcatgaaa
ccatgtcaggacaagactgcgtgtgttctttacagccatgtgtgcgatggagatgcagat
tgtaaagatggctcagatgaggagacatgttcattagaatgtgacaatggccagtttcag
tgtgcccatgggaagaagtgcattgaccagaggcaggtgtgtgacggggtggcccagtgt
caggaccgctctgatgagactcgctgcctgaagcccacggaaggctgtgctcaccactgt
gacaacaagacccgctgcctccctgacaccttcctctgtgatggagagagggactgcctg
gatggcaccgacgaggccaactgtgattcagactccactgatcataaaaatcatcgctat
tttgttgctgaagatgatgacggcaccaacgaagggaattccacctcaatgtctgtacca
gcacccctcaagtgtacttttggcactaaaccatgcaagaacaatattgagtgtgtgctt
tacagccatgtgtgtgatggagaggcagattgtaaagatggctccgatgaggaagagtgt
tcattagaatgtggaagtggccagtttcagtgtgcccatgggaagaagtgcattgaccag
aggcaggtgtgtgatggggtggcccagtgtcaggaccgctctgatgagactcactgcctg
aagcccacggaaggctgtgctcaccactgtgacaacaagacccgctgcctccctgatacc
ttcctctgtgatggcgagagggactgcctggacggcaccgacgaggccaactgtgctgat
gagagctgcagcagtggggagttccgttgcaccattggtcagtgtgtatctataagcatg
cgctgcgacgggcatcctgactgttgggaccactctgacgaggagagctgccacaagctc
ccccagtgcaccaccaaccgccgctgcccacaaagccaggagtgtctgctggaggagtgg
gtctgtgatggggagcaggactgtaaagatggctctgatgaagagaattgcgagatggtc
caattgaagtgtggcgagttccagtgggcctgtacatcaaagagccaatgtgttcccaaa
gcatggagatgtgatggaacaaaggactgtgctgatgaaagtgacgaggcaggatgtggc
caggtggcaacatgcccctctcaccagttccagtgtgctaatacgtcagagtgtttggac
atggccctggtgtgtaactcagtcagaaattgtgctgatggttctgatgagggtggcgac
tgcaaaaccacgtgtccagacaaagccatatgtgtccaaaactgcgacagcacaccacag
ggaacaaggtgtgggtgtaaggctggttaccagcttgacgaggatgcagtgtcctgtggt
gatattgatgagtgtgtcggtggtaaacgaggtgtttgcagccactcatgcgtaaacact
cagggctccttccactgtcactgcaaccctggttacctgttggaatctgatggccgccac
tgcaagatcatgggtgagccttatcttctggcctctgtgcagacagacttgttccttgtt
gggctgagaagcagtagtctggatgtcctggtgtcctctgctaagaaagccatcctgtct
gtggactatgactggaaggatcagagggtgttctgggtcagcctggattcagagggcata
aagtggtcctctctagaccaaaaaaaacaaggaactcttttcaaaggcatcaaatctgac
tgcattgctgttgactgggtagggagaaacctgtactggattgatggtattggaggtggt
cggattattgctattggattaaactcaaccattacaagcgctctggatctcactgtcatt
cttgacaaggaatttgaacaacttctctctctggcactcctgccacagaaggggctcctg
ttctggtcggagatgagtaacgaggcaaagattgagagggccggaatggatgggtctgag
aggagagtggtggtcagtcacagcctcggctggccaggcagtctggctgtggacccaata
ggggagcggctctactggacagacaagaagcttgggtgcattggctcagccaccctgaat
ggcggggatgtcaagattctgcagttgacggagaccaccaacccgttctcggtcacagtt
ttcaatgacctgctctactggtcagacgccaagaggggaactattcaaggggctaataaa
atcactggaaagaactgcaaagtcctactcaaacgatcagcacaaccctttggactcaaa
gtcattcatccactgctgcaaacaagcactgatagtccctgtgagaaacttcattgctct
cacctatgtgtattggcccctggccccaaaggggtctgcaagtgtccctctggtctgctc
ctagcagaggatggcctcaactgctccaacctggtcaactctgccttcctcttggtgttg
tctccaacagttgtcacacagatctacctgcagaccatgctcagtgctgtgggcctgaag
acctggcctgagcacctctctttacctctcgccaatgtcaatgaggcagctattttggat
tacaccctacgagaaaagatgttgtacctggccgactccggccagtcctctgtaggcctc
ttcaagctgaaggagaccagcttggtgcctcgcggccagttcctgcaacttaaaggggac
actgtcacagccctggctctggactggataaccctcaacgtgtactggagtagcaccaaa
cagtcacgcctgcaggtcacctcttccaatggggaacacactgctgtgttaattgacgat
attggaagtctggagtccatagctcttcacccacttagtggaagactctgttttgccaag
cagggggaaggtgctcatgtggagtgtgctcacatggacggggggaagcgagtgcaggtt
tggaaggatgctgtgcagcccacctccctgactttctccaatgatggcggggagatttac
tgggctgacatcggcgctggggtgatcggctctgtcagagttgatggttctggatacatt
gcgtttacaactggggatggcctgattgcatttgcactcagcaaccgcatgcttctctgg
gtgacagaccttgacacaacccaagtttggtatagagatgaccaactgatcaagacactt
tggtttgaggtcaacattgaagttgtcagtttgaaggcctacagcaagtccagccagatg
ggcttcaacttctgctctgatgggaatggggactgcagtcacttctgtctggctgtccct
ggtggtaggacatgtaggtgtgcccatggccatcgaccagtcaatgccacacactgcacc
ctagaccagcactgcccagctggtagtagaccctgtctggatgggcacacatgcctcccc
ctggagaagttctgtgatgggcatcctgactgccttgacacctcggatgagaattgtgtc
catctcaaagggcagtctgaagtccagtccaaagctccaaccctgcctccaagccccagc
attcccacatctgcagatcttggctctaccacctctctggacaacagtgggctggtgaga
aacctggatgtcaagcagcagtgtagtgagaagcactgtaatgggaatggggagtgtgta
gagaccaatgggggcacctcctgtgcctgtggtcaaggctacagtggagactcctgccaa
gaccagctcgccaacaccatgcaaggcccactaatctatggggccgttggcctctgtgct
gcgattgtagttatcagtgtcctcgttgccgtggtcaggagcaagactgcaaacgcaagg
cgagccagtcctgtggtaaagcagaccagtatgattgacttggcgaaacatggagattct
ccctctacacaacattcacctgacgacactaacttttcagaggaagtggcatcatctgtg
gcataa
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integrated database retrieval system
