KEGG   Oncorhynchus keta (chum salmon): 118358255
Entry
118358255         CDS       T09424                                 
Name
(RefSeq) LOW QUALITY PROTEIN: splicing factor 3A subunit 1-like
  KO
K12825  splicing factor 3A subunit 1
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oke00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    118358255
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oke03041]
    118358255
Spliceosome [BR:oke03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    118358255
 Complex B
    118358255
 Complex C
   U2 SnRNP specific factors
    118358255
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Rad60-SLD Ubiquitin_2
Other DBs
NCBI-GeneID: 118358255
NCBI-ProteinID: XP_052334671
LinkDB
Position
25:complement(13749867..13760338)
AA seq 790 aa
MPPGPVQLVQLEPNSKADEPTGETPATKPIVGIIYPPPEVRNIVDKTASFVARNGPEFEA
RIRQNEINNPKFNFLNPNDPYHAYYRHKVNEFKEGKGQEPSAAVPKVMQQQALLNSQQLP
QKVQAQVIHETVVPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQFLTQLMQKE
QRNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLLMKLKREAENPREVLDQVRYRVEW
AKFQERERKKEEEEREKERVSYAQIDWHDFVVVETVDFQPNEQGHFPPPTTPEELGARIL
TQERYDKFGESEEVEMEVESEDEDDVEQEDRDDGRPTQPDQDTQLQDMDEGSDEEDDGKA
PLPPDNPMPPPLPPTPDQVIIRKDYDPKASKPQPPAKTLDEFLISPITGERIQASKMQEH
MRIGLLDPRWLEQRDRGIRERQIEDEVYAPGMDIESSLKQLAERRTDIFGVEETAIGKKI
GEEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVQEDESKEKIGPS
KPELYHHHHHQSPLISSAPLLPKPSPPMNTMARAPPSMLPPVRTTLLSAVPVIPRPPMAP
VQMRLAPGQVLTPMPPMMHAPRINVVPIPQPPHMMAPRPPPMVVPTAFVPAPPVPAPRPR
PDPQPPSQPPPPHNDEPASKKMKTEDNLMPEEEFLRRYKGSVSVTVQVPNMQDKTEWKLS
GQALNFTIPLTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNINNGSVIHL
ALKERGGRKK
NT seq 2373 nt   +upstreamnt  +downstreamnt
atgccgcctgggcctgtacaacttgttcagcttgagcccaacagcaaggcagatgagcct
acaggggaaaccccagcaacgaaacccatagttgggatcatctatccacctcctgaggtc
cgaaacattgttgataagactgccagctttgttgccaggaatggaccagagttcgaagca
aggatccgtcagaatgagatcaacaacccaaagttcaacttcctgaaccccaatgacccc
taccatgcttactatcgccacaaggtcaatgaattcaaggagggcaagggccaggagccg
tctgcggccgtgccaaaggtcatgcagcagcaggccctgctgaactcgcagcagcttcct
caaaaggtgcaggcccaggtgattcatgagacagtggtgccaaaggagcctccgcctgag
tttgagttcattgctgaccctccttcaatctcggcattcgacctggatgttgtcaagctg
accgcccagtttgtggctcgcaacgggcgccagtttctcacacagctcatgcagaaagaa
cagcgaaattaccagtttgacttcctgcgacctcaacacagcctcttcaactacttcacc
aagctggtggagcagtacactaagattttgatccctcccaagggactgctcatgaagctg
aaaagagaggctgagaaccccagggaggtgctggaccaggtgaggtaccgcgttgaatgg
gcgaaatttcaggagcgtgaaaggaagaaggaggaggaggagcgggagaaagagcgtgtg
tcctacgcccaaattgactggcatgactttgtagtggtggagaccgtggacttccaacct
aatgagcaaggccactttccaccacccaccacacctgaggaactgggagctcgcatcctg
acccaggagcgttatgacaagtttggagagagcgaggaggtggagatggaggttgaaagt
gaggacgaggatgatgttgagcaggaggatcgggatgatgggcgtcccacacagcctgat
caggacacacagctgcaagacatggatgagggttctgatgaagaggatgatggcaaggca
ccattgcccccagacaaccccatgccacccccactgccccctactccagaccaggtcatt
atccgcaaggattacgaccccaaggcctccaagccccagcctccagccaagactctggat
gagttcctcatctctcccatcacgggtgagaggatccaagccagtaagatgcaggagcac
atgcgcatcggactactggatccccgctggctggagcagagggaccgcggcatcagagag
aggcaaatagaggatgaggtttacgcccctggcatggacattgagagcagcctaaaacag
ctggctgagaggcgtactgatatctttggtgtggaggagaccgccatcggtaagaagatt
ggagaagaggagatccagaagcctgaggagaaggtgacctgggatgggcactctggcagc
atggcgcgtactcagcaggcagcacaggccaacatcaccctacaagagcagattgaggcc
attcacaaggccaagggactggtgcaggaggatgaaagcaaagagaagattgggccaagc
aagcctgagctttaccatcatcatcatcatcaatcacccctcatctcctctgcccccctt
ctgcccaaacccagccctccaatgaacacgatggctcgggcccctccttccatgctgccc
cctgtacgcaccactctcctgtcagctgtgcctgtgattccacggccccccatggcccct
gtgcagatgcgcctagccccagggcaggttctaacacccatgccccccatgatgcatgcc
ccccgcatcaacgtggtgcccattccccaaccacctcacatgatggcccccagaccacca
cccatggtggtcccaactgcatttgtccctgcccctccagtcccggccccccgcccccgc
cctgacccgcagccaccttcccagccacccccaccccataatgatgagcctgccagcaag
aagatgaagacagaggacaacctcatgccagaggaggagttcctccgtagatacaagggt
tcagtgtccgtcacagtgcaagttcccaacatgcaggacaagactgaatggaagctaagt
ggacaagcgctcaatttcactatcccactcacagatcaggtgtctgttattaaagtgaaa
atccatgaagccactggaatgccagccggaaagcaaaagctgcagtatgagggaattttc
atcaaagattccaactcgctggcctactacaacataaacaacggttcagtcatacacctg
gcactgaaggagagaggtgggagaaagaagtga

DBGET integrated database retrieval system