Oncorhynchus keta (chum salmon): 118358310
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Entry
118358310 CDS
T09424
Symbol
lgi3
Name
(RefSeq) leucine-rich repeat LGI family member 3
KO
K19999
leucine-rich repeat LGI family member 3
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118358310 (lgi3)
Membrane trafficking [BR:
oke04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
118358310 (lgi3)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EPTP
LRR_8
LRR_5
LRR_4
LRR_1
LRRCT
LRR_9
LRR_14
LysM2_CERK1_LYK3_4_5
Motif
Other DBs
NCBI-GeneID:
118358310
NCBI-ProteinID:
XP_035591861
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All DBs
Position
25:16972573..17001340
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AA seq
550 aa
AA seq
DB search
MLNAGSRRVPGWLKLLSSLCLLLCLVGETGAKRVPKIPRCPTTCSCTKDSAFCVDTKTIP
KSFPPGIISLTMVNAAFTTIPEGAFSHLHLLQFLLLNSNTFTVVADDAFAGLSHLQYLFI
ENNDIQALSKHTFRGLKSLTHLSLSNNNLQLLPRELFKYFDILTDLDLRGNSFRCDCKIK
WLVDWMEKSNTSVPAIYCASPFEFQGRRIHDLTPRDFNCISADFAVYETFPFQSVSVESY
EFNDDQFVAFAQPDTGFCTLFVWDHVEMVFRMYHNITSRSAVYCKPVVINNTLYMVVAQL
FGGSHIYKWEEDPQRFVKIQDIDTTRVRKPNFVETFQLDDEWYFAVADSSKAGSTSIYRW
NSNGFYSHQSLHPWHRDTHVEFLDVEGKQRLILSSASQPPVVYQWNRSLRQFAFHSQITE
TADVQMVKHFWVRKVLYLCLTRFIGDSKILRWEGQRYVEIQTLPSRGSMAVYPFIVGPRQ
YLLLGSDFSFSRVYLWDDLTQRFQLFQELNMRAPRAFSLVSVDNKDILLAASFKGNTLAY
QHLIVDLSAK
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgctgaatgccggatcgagaagggtcccgggatggctgaagctgttgtccagcctatgt
ctgcttctctgcctggtgggggagactggggccaagagggtccccaaaatcccccgctgt
cctaccacctgctcctgcaccaaagacagtgccttctgtgtggataccaaaactatcccc
aagagctttccccctgggatcatctccctgacgatggtgaatgcagccttcactacaatc
ccagagggagccttctcccatctgcaccttctgcagtttcttctgctgaactcaaacacc
ttcactgttgtggctgatgatgccttcgcaggtctgtcacacctgcagtacttatttata
gagaacaatgacatccaagccctgtcaaagcacaccttcagagggcttaaatccttgact
cacctttctctgtcaaataataacctgcagctccttccacgagaactcttcaaatatttt
gacattctgacagacttagacctgcggggtaactcattccgctgtgactgtaaaatcaag
tggcttgtggactggatggagaagtccaacacctctgtccctgccatctactgtgccagc
ccatttgagttccaaggccgcagaatccatgatctaaccccacgagacttcaactgtatc
agcgcagactttgcagtttatgaaactttccccttccagtctgtgtcagtggagtcctat
gaattcaacgacgatcagtttgtggccttcgcccagcccgatactgggttctgtacactg
tttgtatgggatcatgtggaaatggtcttccggatgtaccataatataacatctcgctcc
gctgtctactgcaagcctgtggtaataaacaacactctttacatggttgtggctcaactt
tttggaggatcccacatctacaagtgggaagaggacccacagcgatttgtgaagatccag
gacattgacaccacacgtgtgaggaaacccaactttgttgagaccttccagctggatgat
gagtggtactttgcagtagcagacagttccaaggcaggctctacgagcatataccgctgg
aacagcaacggtttctactcccaccaatcccttcatccctggcatcgtgacacccatgtg
gagttcctagatgtggaggggaagcagcgtctcattctctccagtgcctcccagccccca
gtggtttaccagtggaaccgcagcctgcgccagtttgcctttcattcccaaatcactgag
actgctgacgtgcagatggtcaagcatttctgggtgcgcaaagttctttacctctgcctt
acacgcttcattggcgactccaagattctccgctgggaggggcagcgctatgttgagatt
cagaccctgccctcacgtggctccatggctgtgtatccattcattgtgggcccccgccag
tatctcctcttagggagtgatttctccttctctcgagtttacttgtgggacgaccttacc
cagcgcttccagctcttccaggagctcaacatgagagcaccccgggccttcagcttggtg
tcagtggacaacaaagacatcctgctggcagccagcttcaaaggcaacaccctggcctac
cagcacctaatagtggatcttagtgccaaatag
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