KEGG   Oncorhynchus keta (chum salmon): 118358322
Entry
118358322         CDS       T09424                                 
Name
(RefSeq) ras-related protein Rab-7a-like isoform X1
  KO
K07897  Ras-related protein Rab-7A
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke04137  Mitophagy - animal
oke04140  Autophagy - animal
oke04144  Endocytosis
oke04145  Phagosome
oke04148  Efferocytosis
oke05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:oke00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    118358322
   04145 Phagosome
    118358322
   04140 Autophagy - animal
    118358322
   04137 Mitophagy - animal
    118358322
   04148 Efferocytosis
    118358322
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    118358322
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oke04131]
    118358322
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oke04147]
    118358322
   04031 GTP-binding proteins [BR:oke04031]
    118358322
Membrane trafficking [BR:oke04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    118358322
Exosome [BR:oke04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   118358322
  Exosomal proteins of other body fluids (saliva and urine)
   118358322
  Exosomal proteins of colorectal cancer cells
   118358322
  Exosomal proteins of bladder cancer cells
   118358322
GTP-binding proteins [BR:oke04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    118358322
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA RsgA_GTPase PduV-EutP cobW ATP_bind_1 nSTAND3 Septin AAA_16 G-alpha AAA_7 AAA_22 NTPase_1 AAA_24 AAA_5 SRPRB MCM ATPase_2 NACHT NB-ARC AAA_14 ATP-synt_ab ABC_tran DAP3
Other DBs
NCBI-GeneID: 118358322
NCBI-ProteinID: XP_035591889
LinkDB
Position
25:complement(17426008..17429957)
AA seq 213 aa
MRKQGKANMASRKKILLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMV
DDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASP
RDPENFPFVVLGNKIDLENRQVTTKRAQAWCTSKGSIPYFETSAKEAINVDQAFQTICRN
ALKQESEVETYDFPDQIKLRDDRPASSSDGCSC
NT seq 642 nt   +upstreamnt  +downstreamnt
atgaggaagcagggaaaggcaaatatggcgtctcggaagaagattctactcaaggtgata
attcttggagactcaggagttgggaagacctctctcatgaaccaatatgtgaataagaag
ttcagcaatcagtataaggccacaatcggtgctgactttcttaccaaagaggtgatggtg
gatgacaggcttgtgacaatgcagatctgggacactgcagggcaggagagattccagtca
ttgggcgttgctttctatcgaggtgcagactgttgtgtcctcgtgtacgatgttactgcg
ccaaacaccttcaagactcttgacagctggcgagacgagttcctgattcaagccagcccc
cgtgacccagagaacttcccatttgttgtgctcggcaacaagattgacttggagaacagg
caggtgacgaccaagcgagcccaggcatggtgtacgagtaagggcagtatcccatatttc
gagacaagtgcgaaggaggccataaatgttgatcaagcctttcaaactatttgccgaaat
gctctcaaacaggagtcagaagtggagacttatgacttcccagatcagatcaaactgagg
gatgacagaccagcctcctctagtgatggctgcagctgctga

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