Oncorhynchus keta (chum salmon): 118358337
Help
Entry
118358337 CDS
T09424
Name
(RefSeq) PDZ and LIM domain protein 2-like isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
118358337
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oke04990
]
118358337
Domain-containing proteins not elsewhere classified [BR:
oke04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
118358337
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
DUF4749
PDZ_6
LIM
PDZ_2
Motif
Other DBs
NCBI-GeneID:
118358337
NCBI-ProteinID:
XP_035591943
LinkDB
All DBs
Position
25:complement(17993754..18051948)
Genome browser
AA seq
367 aa
AA seq
DB search
MALTVNLIGPSPWGFRIYGGRDFKKVITISKVNGGSKAELAALQPGDVILEINGENTVDM
LNVEAQNKIKNSKTQLQLLVERPEPPSPEQTNGTTTPEKLTGRFQEAVLVSRDENQNYRE
YSISSPASLSPGPYSPEPPSSPEGKRESTKSIQLCSWSPEEKTSSYKLSRPLSQEFSSSD
FRSNSVSSRTPTPPGCYSPNSPVDCELSVSPRRSSSSSDFTMQRFDRDSEVYKMIQENKE
SRTAPRQSNTFRMLQEVLEADEKEAAVRFPGLSPKTTPPKPTSPGGGVSKYHTCEKCGIS
IVTQAVRIMDDRFRHPECYTCSTPECGLNLKMRGHFWVGEEMFCEKHAHENYQGLGTAPR
ATISPRH
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgacagtgaacctgattggtccgtctccatgggggtttagaatatacggagga
agggacttcaagaaggtgataaccatttccaaggtcaacgggggcagcaaagccgagctg
gctgccctgcagcctggtgatgtcatcctggagatcaatggagagaacacagtggacatg
ctcaatgtggaggcccagaacaagatcaaaaactccaagactcaactgcagctgctggtg
gagaggcctgagccccccagccctgaacagaccaatggaactaccaccccagaaaagctc
actggacgcttccaggaagcggtgctggtgagtcgagatgagaaccagaactacagagag
tactcgatctccagcccagcctccctgtcacctggaccctactcacctgagcccccttcc
agccccgaggggaagagagagagcaccaagagcatccagctgtgttcgtggtctccagaa
gagaagacgtctagttacaagctgtccagaccactgtcgcaggagttctcctcttcagac
ttcaggagtaactctgtgtccagtcgaacgcccacccctccaggatgctactcgcccaat
agccctgtcgactgcgagctgtctgtctcccccaggcgcagcagttccagctctgacttt
accatgcagaggtttgaccgggattcagaggtctacaagatgatccaggagaacaaggag
tctcgcacggctcctcgacagtccaacaccttccgcatgctgcaggaggttctggaggcc
gatgagaaggaggcagctgtgcggttcccagggctctcccccaaaaccacccccccaaaa
ccaacatctcccgggggtggagtctccaagtaccacacctgtgagaagtgtggcatcagc
attgttacacaggcggtgcgcatcatggacgaccgcttccgccacccagagtgctacacc
tgttctacaccagagtgcggtctcaacctgaagatgcgaggtcacttctgggtgggagag
gagatgttctgtgagaagcatgcccacgagaattaccagggcctgggcactgccccacgt
gccaccatctcgccccgccactga
DBGET
integrated database retrieval system
