Oncorhynchus keta (chum salmon): 118358348
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Entry
118358348 CDS
T09424
Name
(RefSeq) vacuolar protein sorting-associated protein 33A isoform X1
KO
K20182
vacuolar protein sorting-associated protein 33A
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04140
Autophagy - animal
oke04142
Lysosome biogenesis
oke04145
Phagocytosis
oke04148
Efferocytosis
oke05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
118358348
04142 Lysosome biogenesis
118358348
04140 Autophagy - animal
118358348
04148 Efferocytosis
118358348
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
118358348
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118358348
Membrane trafficking [BR:
oke04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
118358348
Hops complex
118358348
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec1
RMD9_mid
Takusan
Motif
Other DBs
NCBI-GeneID:
118358348
NCBI-ProteinID:
XP_035591968
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All DBs
Position
25:19621262..19637719
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AA seq
599 aa
AA seq
DB search
MSAHLSYGRVNLNILREAARKELREFLDKCAGSKAIVWDEYLTGPFGLIAQYSLLKEHEV
EKMFTLKGGRLPAADVKNIIFFVRPRLELMDIIAENVISEDKMHSPRDFHILFVPRRSML
CEQRLKEQGVLGSFINIDEYILDLIPYDGDLLSMESEGAFRECYLENDQTSLYHTAKGLM
TLQALYGTIPQIFGKGECARHVANMMLRMKREFAGSQTQILPVFDSLLLLDRNIDLLTPL
ATQLTYEGLIDEVYGITNGYAKLPPEKFAAQKKQGEVGKDLPTEPKKMQLNSAEELYAEI
RDKNFNAIGAALSKKAKIISAAFEERHNAKTVGEIKQFVSQLPHMQAARSSLANHTSIAE
LIKDITTSEAFFDNLTVEQEFMTGVDTDKVNTYIEDCIAQKDPLIKILRLVCMQSVCNNG
LKQKILDYYKREILQTYGYEHMLTLNNLERTGLLKPQTSTRNNYPTIRKTLKLWMEDANE
QNPNDISYVYSGYAPLSIRLTQVLARPGWRSIEEVLKMLPGPHFEERQQLPAGLHKKRQQ
GENRTTLVFFLGGVTYAEVAALRFLSQMEDGGTEYIIATTKLINGTSWIKSLMDRPEAP
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgcacttatcctatggaagagtaaatttaaacattttgagggaagcagcgcgg
aaagagctccgtgaatttttggacaaatgtgcaggaagcaaggctattgtgtgggatgaa
tacctgactggaccctttggattgatagcacaatattccttgctgaaggaacatgaggtg
gagaagatgttcaccctcaaaggggggcgtcttcctgctgctgatgtgaaaaatatcatc
ttctttgttcgtcccagactggaactgatggatattatagctgagaatgtcatcagtgag
gataagatgcattccccacgtgacttccacatcctgtttgtgccccggcggagcatgctc
tgtgagcagcggctgaaggagcagggggtcctgggctcgttcatcaacatagacgagtac
atcctagacctcatcccttatgatggagacttgctctccatggagtctgagggggccttc
agggaatgctatctagaaaatgaccagacaagtctttaccacaccgccaagggccttatg
actctccaggctctgtatgggaccatcccccagatatttgggaaaggggagtgtgcacgg
catgtagctaatatgatgcttaggatgaagagggagtttgctggcagtcagactcagatc
ctgcctgtgtttgactcactgctgctgctggaccgcaacatagacctgcttacccctctg
gccacacagctcacctatgagggcctcattgacgaagtttatggaatcaccaacggttat
gcgaagttgcctccggagaagtttgctgcccaaaagaagcagggtgaggtgggtaaagac
ctgcccacggagcccaagaagatgcagctcaactcagcggaggagctgtatgctgagata
cgggacaaaaacttcaacgccataggggctgcactgagcaagaaggccaagatcatctct
gctgcctttgaggagcgacataatgccaaaacagttggcgagataaagcagtttgtgtcc
cagctgccccacatgcaggcagcacgaagctcgctggccaatcacacctccatagctgaa
ctcattaaggacatcaccacctcagaggccttctttgataacctgacagtggagcaggag
tttatgactggagttgacacagacaaggttaacacatatattgaggactgtattgcccag
aaggatcctctgatcaaaatcttgcggctggtctgtatgcagtcagtctgcaacaatggc
ctcaagcagaagatattggactactacaagagagagatcctgcagacctatggatatgaa
cacatgcttaccctcaacaacctggagaggacaggtcttctgaagccccagacaagcacc
aggaataactaccccaccatcaggaagacactcaaactttggatggaggatgccaacgaa
cagaaccccaatgacatctcctatgtgtacagtggttatgctcctctcagcatccgtctg
acccaggtgttggccaggcccgggtggcgcagcatcgaggaagttctgaagatgctccct
ggtccacactttgaggagagacaacagctgcctgctggtctccataagaaacgccagcag
ggggagaacaggaccaccctggtgttctttctgggaggggtgacttacgcagaagttgct
gccttgcgcttcctgtctcagatggaggatggtggcacagagtacatcattgccactacc
aagctcatcaatggtaccagttggatcaagtctctgatggaccgcccggaggccccctga
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