Oncorhynchus keta (chum salmon): 118358351
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Entry
118358351 CDS
T09424
Name
(RefSeq) rab5 GDP/GTP exchange factor-like isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
118358351
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118358351
Membrane trafficking [BR:
oke04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
118358351
Protein recycling
Other Rab GTPase associated proteins
118358351
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
zf-A20
DUF5601
YtxH
Motif
Other DBs
NCBI-GeneID:
118358351
NCBI-ProteinID:
XP_035591973
LinkDB
All DBs
Position
25:19664216..19669558
Genome browser
AA seq
474 aa
AA seq
DB search
MAAEQQRGIRVTQAELLCKDACGYYGNPAWQGFCSKCWRERTRKAEADRQETGPHNDAGS
PLTFSKFEEKKNMEKGRKVNTMRRLFWGGPSPPKRPESSEGQVAILKAYQSIEPGDFTSF
LKLLRNPSSQRLQSRCTAFLNTMEAYHGLPVQKQSDLVQDFYQNIAVHFSSLSEIQVSQM
MEHMEKLIMTRLHKWVFCHDSCDDEVKDLALQRRIRSLNWVTPHMLRVPFPDERAEVVSD
PFLPAITAIIEMDAKRAPQDKLTCVCKCSQNVFQALSTSNSEPANADDYLSGLIYVVLKA
NPPRLHSNMQYVIRFGLPHSLMAGESGYYFTNLCCAVAFIEKLDGPALNLSPVEFEGYMQ
GRRAPSKRGSERQKMARETQDQLEDLKGRQEKVDQGLNALKEQLQHWVQSVKAQIDEVTF
QSALTQEEIKAQSEFLQSHSVSTLTQADDVKDQSVLLLDGQESNNNTCLTEAEC
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggagcagcaaagagggatccgagtcactcaagcagagcttctctgcaaggat
gcgtgtggttattatggcaaccctgcatggcagggattttgctccaagtgctggcgagaa
cgaacccgtaaagcagaggcggacaggcaggagactgggccccacaatgatgcaggttct
cccctcaccttttctaaatttgaggagaagaagaatatggagaagggtcgcaaagtgaat
acgatgaggaggctcttctggggtggaccgtcccctcctaaacgcccagagtcttcagag
ggccaggtggctatattaaaagcctatcagagcattgagccaggggattttaccagcttc
ctgaagctgctgaggaacccatcctctcaacgtctgcagtcccgttgcactgctttcctc
aacaccatggaggcttaccacggcctgccagtgcagaagcaatctgaccttgttcaagac
ttttaccagaacatcgctgtgcatttcagtagtctttcagagattcaggtctctcagatg
atggagcacatggagaagctgatcatgacgcgtctgcacaagtgggtgttctgccatgac
agctgtgacgatgaagtgaaagacttggcactccagaggaggatacggtccttaaactgg
gtcaccccccacatgctgagggtgcctttccctgacgagcgggctgaggttgtcagtgat
ccctttttgcctgctataacagccataatcgagatggatgccaagcgtgcgccacaggac
aagcttacatgcgtatgtaagtgcagtcagaatgtcttccaggctctctccacttccaat
agtgagccagcaaatgctgatgactacctgtctggcctgatttacgtagtactaaaggcc
aacccaccccggcttcactccaacatgcagtatgtgatccgcttcggcctccctcacagc
ctgatggcaggagagagtggctactacttcaccaatttgtgttgtgcagtggccttcatt
gagaagctggatgggccagcactcaacctaagcccagtggagtttgagggctacatgcag
ggtcgccgtgctccctcaaagaggggcagtgagaggcaaaagatggccagggagacgcaa
gaccaactagaggacctgaagggtcgacaggagaaggtggaccaaggactaaatgcccta
aaagagcagctacagcattgggtacagtctgtcaaggcacagatagatgaggtaacattc
cagtctgctctgacacaagaagaaattaaagcccagtcagagtttttgcaaagccattct
gtctctactctaacacaggcagatgatgtcaaagaccagtcagtgttgttgctagatggt
caagagtccaacaacaacacttgtctaacagaggcagagtgttag
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