Oncorhynchus keta (chum salmon): 118358358
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Entry
118358358 CDS
T09424
Symbol
clip1a
Name
(RefSeq) CAP-Gly domain-containing linker protein 1 isoform X1
KO
K10421
CAP-Gly domain-containing linker protein 1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
118358358 (clip1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oke03036
]
118358358 (clip1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oke04812
]
118358358 (clip1a)
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
118358358 (clip1a)
Cytoskeleton proteins [BR:
oke04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
118358358 (clip1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
CLIP1_ZNF
KASH_CCD
Motif
Other DBs
NCBI-GeneID:
118358358
NCBI-ProteinID:
XP_035591989
LinkDB
All DBs
Position
25:complement(19770641..19833778)
Genome browser
AA seq
2267 aa
AA seq
DB search
MSTTKPSGLKAPSKMGRSTGAPATKTTPSAAGSKVAAADKSTPGGGAAGTQDGGENFQVG
ERVWVNGNKPGVVQFLGEAQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEALKGIFTRP
SKLSYTEGEANGTQTAPSSRAGSPTPSTASLASHTPSVKKASTATPATPASNLARTNSES
VSNLSDTSSVKKGERELKNGDRVLVGGTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDG
AVAGTRYFQCQPKYGLFAPVHKVTRIGFPSTTPAKAKTMVRKLVATPSGLKRSPSASSIS
SMSSVASSVSAKPSRTGLLTETSSRYSRKISGTTAVQEVLKEKQQHIEQLMAERDMERAE
VAKATTHVGEVEQELTLLREDQEQMEAKMDQLRTLVEAADKEKVELLNQLEEEKRKVEDL
QFRVEEACITKGDLETQTKLEHAHIKELEQSLLFEKTKAEKLQRELEDTRVATVSEKSRI
IELERDLVLRTREVADLRLRLEVQQSSEGSDSTTSPLLEEVSSLRAQLASQEDQQQVELA
GLKEMLAAEEKAHSEAVSQFQVSSTKVSTDNEQLKLRLSQNEKENADVIELWRCKLESAI
ASHQQATEELKVSFSKGAGSQTTELVETKSALERLKVEYKQALEEAGARCEAEAAARARE
TGELNKQLLVVSEEKECLEESLRSSVESAEEQHLVEMEDVLGKLHTAELKVNELEEHEAK
LVQQTQDRAKEVQEQVAAMEVLQSQAGQGNQALQNLRTQLEEAQSQARSQGNRVRELNSE
LEGKQQELLSLQQSLTSVLQDKVSLEQELGNLKQKLSESTDNQAQSTQTMQGLERKLKAG
EERLDQLANEKSKLQSDISDMMKSSGDSSAQLTKMNEDITQKKRSLEELQTQLAEEKERA
ACSEEQQQQEVAQKEQELKAARDEHQGQLSNLQGKITQLEKSLQQCEAQAKDLQTSQQKA
LSEASEYHAKQLQELQGQADKTKQELSVSRKKAQELERLVTELQPYKEKAQFLSGELDYS
GQHIERLSTDLEKQISVLSHMSKESSDLKAQEGSLKNQLSELEAKLSASEACHQELSGKT
EELLTLRDKLTKEQEELWTTNRKLDGENASLSREVEKLRVAVEEAQANNKSLSQSEAERQ
SQIEELQKTNAEKHELLLKYQQEILQQENKRKQLAEVYEKTCEERNELQQSREKLTSEKD
SLLLERDAARNAKKSLDVKNVELQARCQSLSLEKEDFYLKNTQLQAQTETLGKDKVEMFT
QINAAIFDKEALQALNAELQNQLNITKKDLEKSVRDKVELHASKMSLAKMLDQSKTSSEV
TDSERLHLLQEKEDLLATQRKVCSEKDELIKEREELKEKLRLSTEEVATSKEKVKELLSS
FGEEKEALCLQNAETEKALHNIRKEKMAIELTLEKQNMESDCWVHEKEELEEKHTQEVSE
KCTLTKERDKLAGEICSMKDQLDSSTKANDDLKQANSNLTSLLEELKQKIEKVEAEGASL
KKEKVDLQAQLQKLCSEREALEKSKTELAEVHHELKGNSEQMRLELIKKNDTLTKKQDLL
LSQQTELNKSLQKDKEDLLLQVQEFKGQTQSLSKAKMLLELQQQTEASDRSKLSSAKDDL
SREREDLQTQLFTLTQEKITLLQSESSLKAEVASVCVERDTMASERNSLRSDLGQLKTTH
TGLLGERRGLLEENVQMQVKVQDLTQQSVTREKAMDELSANLKDIGVERKALAGEVENLK
AQLKERDQEKGDLAGDQICLSAKLEKLVNEVSSLAKEKVDLLAVQSRLEQDLSSLHSSQE
SRDGEHSRIMGEVEKLQVTQTQLEADAQTLRAEKSVMEGQHKASVKEASVSSKVREEMAT
NLEDLKVQKDALLKERNKATQQVTQLEAQLKNAISKQLEAAESSGKTAEVVELLTQEKGL
LQQEKIEAQSLLEEFRRAKQEMTNQLDSLKQQNSKYKKELNLSKEQLSSENQKISGLCQE
INNLKQATSVKSQSLVALQEENNKLTKELGSSKKETSGQQKLEAQQSKLNKQLQEMKQRE
NTMKKKLDEEKAFLQKSIHKSSALISEKDQELETLMSELSVLRGESAIAKTLKFTIQLLE
KDKAQLQEHVQSLEKSLSGGQETVTSSSGDTALDQLRENKETAESQAAIEFLNSVIVDLQ
KKNEELKGKLEKMAEAALNGNNASELDNYDGSFNKGPSKKKVPPRLFCDICDCFDLHDTE
DCPTQMQMPDSPPHTTYHGSKDEERAYCDICEAFGHWTDSCNDDQTF
NT seq
6804 nt
NT seq
+upstream
nt +downstream
nt
atgagcacaaccaagcccagcggactcaaagcgcccagcaagatgggtaggtcaacgggg
gcgccagccaccaagaccaccccctccgctgccggatccaaagtagctgcagcggacaag
tccactccaggaggcggtgcagctgggacacaagatggcggggagaactttcaggttggg
gagcgagtgtgggtgaatgggaacaaacctggcgtggtacagttcctgggggaggctcag
tttgcaccaggacagtgggctggcatagtgttggatgagcccattgggaagaacgatggc
tcggtggcaggggtgcgctatttccagtgcgaggccctgaaagggatattcacccgcccc
tccaagctgtcctacacagagggcgaggccaatgggactcagacagcaccttcgtcccgg
gctgggtcgcccaccccctccaccgccagcctggcctctcacaccccctctgtcaaaaaa
gcctcaactgcaacgcctgccactccagcctccaacctggcacgcacaaacagtgagtcc
gtctccaacctctcagacaccagctcggtcaagaaaggggagagggagctgaagaatgga
gaccgcgttttggttggtggcacaaaagctggtgtggttcgctttcttggtgaaacagac
tttgccaagggagagtggtgtggtgtggaactagatgagcccctgggaaagaacgatggg
gcagtggcaggaaccagatactttcaatgccaacccaagtatggcctgtttgccccagtc
cacaaggtcacgcgtattggcttcccctccaccacgccggccaaggcaaagaccatggtg
cggaagttggtggccacgccctcgggcctgaagcgcagccccagcgcctcctccatcagc
tccatgagctctgtggcctcctctgtcagtgccaagcccagccgcacaggcctgctgaca
gaaacatcatcacggtactcgagaaagatctctggcaccacagcagttcaggaggtgctg
aaggagaagcagcagcacatcgagcagctgatggcggagcgtgacatggagagggcagag
gtggccaaggcaaccacccatgtgggcgaggtggagcaggaactgaccctgctgagagag
gaccaggagcagatggaggccaagatggaccaattacgcaccctggtggaggctgctgac
aaggagaaggttgagctgctcaatcagctggaggaggagaagaggaaagtggaggacctc
cagttccgtgtggaggaagcttgcattaccaaaggagacctggagacgcagaccaaactg
gagcatgcccacattaaggagcttgaacagagcctgctctttgaaaagaccaaagctgag
aaactccagagagagttagaagacactagggtggccacggtgtcagagaagtcccgcatc
atcgaactggagagggacttggtgctgaggaccagggaggtggctgacctgcggctgcgt
ctggaggtccagcaaagctcggagggctcagactccaccacttcccctctcctggaagaa
gtgagctctctgagggctcagctggcctctcaagaagaccagcaacaggttgagctggct
gggctgaaggagatgctggcagcggaggagaaggcccacagtgaggcagtgtctcagttc
caagtctcatccaccaaggtctccacagacaacgagcagttgaagctgcgcctcagtcag
aacgagaaggagaatgcagacgtcatagagctgtggcgctgcaagctggaatctgccatc
gcctcacaccagcaggccacggaggagctgaaggtgtccttcagtaaaggggctggttcc
cagacgacagagctggtggagaccaagagtgccctggagaggctgaaggtggagtacaag
caggcactggaggaggcgggagccaggtgtgaggcagaggctgcagcccgggcacgggag
acaggggagctcaacaaacagctgctggtcgtgtcggaggagaaggagtgcctggaggag
agcctgcggtccagtgtggagagtgctgaggagcagcacctggtggagatggaggacgtg
ctgggcaaactgcacactgctgagctgaaggtaaacgagctggaggagcatgaagctaag
cttgtccagcagacccaggaccgtgccaaggaggtccaggagcaggtggcagctatggag
gtcctgcagtcccaggcaggccaaggtaaccaagctctccagaacctgaggacccagctg
gaggaggcccagagccaagctcgctcacagggcaacagggtcagggagttgaactctgag
ctggagggtaagcagcaggagctcctctccttgcagcagagcctaacctctgtgctgcaa
gacaaggtctccttggagcaagagctgggcaacctgaaacaaaaactgtcagaaagcaca
gacaatcaggctcagtcgacacaaactatgcaagggctggaaaggaagctaaaggctgga
gaggagaggcttgatcagctcgcaaacgaaaagtccaagctccaaagtgacatctcagac
atgatgaagtcatcaggcgacagttcagcacagcttaccaaaatgaatgaagacatcact
cagaaaaaaaggagtctggaagagttacagacccaactcgcagaggagaaggagcgggct
gcatgttctgaggagcaacaacagcaggaagttgcccagaaggagcaggagctgaaggct
gccagagacgagcatcagggccagctaagcaacctgcaggggaaaatcacacaactggag
aagagtttgcagcagtgtgaggcccaggccaaggatcttcagacctcccagcagaaggcc
ctgtctgaggcctcagagtaccatgccaagcagctccaggagctgcagggtcaggctgac
aagaccaagcaggagctgagtgtctccaggaagaaggcccaggaactggagaggctggtg
accgagctgcagccttacaaagagaaggctcagtttctttctggtgagctcgactactcc
gggcagcatattgagagattgtccacagacctggagaagcaaatctcagtgctgtcgcac
atgtctaaggaaagctcagatctaaaagctcaggaaggaagtctcaaaaatcaactctct
gaactcgaggccaagctctcagcctcggaggcttgtcaccaggagctctcaggtaagact
gaagaacttctgacactgagggacaaactcacaaaagagcaggaggaactttggaccacc
aaccggaagctagatggagagaatgcctcactatccagagaggtggagaagcttagagtt
gctgttgaggaggcacaggccaataacaaatccctcagtcaatctgaagcggagcgtcag
tcccaaattgaggagcttcaaaagacaaatgcagagaagcatgagctccttttgaagtac
caacaggagatcctgcagcaagaaaataagaggaagcagctagcagaggtctatgagaag
acctgtgaggagaggaacgagctccagcaaagcagggagaagctgacctctgagaaggat
agccttttgttggagagggatgcagccagaaatgctaagaaatcccttgatgtaaagaat
gtggaattgcaggcaaggtgtcagtctttaagcttggaaaaagaagacttctatctgaaa
aacactcagctgcaggcacagacagagaccttgggcaaagataaagtggagatgtttact
caaattaatgctgccatatttgacaaagaggccctccaagccttgaatgcagagcttcaa
aatcagctgaatatcactaagaaggatcttgagaagtctgtccgtgacaaggttgagcta
catgcttcaaaaatgagcctggccaaaatgctggaccagtccaagaccagcagtgaggtt
accgactctgagaggcttcacctcctgcaggagaaagaggacctgcttgctacccagcga
aaggtgtgttctgagaaagatgaacttatcaaggagagagaagagttaaaggagaagctc
agactttctacagaggaagtggcaacctctaaggagaaagttaaagagctgttgtcatct
tttggcgaggagaaggaagcactttgtctccagaatgcagaaactgagaaggcgctacac
aacatacgcaaagagaagatggctatagaattaacactggaaaagcagaacatggagagt
gactgttgggtacatgaaaaggaagagctggaagaaaagcacacacaggaggtctctgaa
aagtgtactctaacaaaagagcgtgacaagctagcaggtgagatctgcagtatgaaggac
cagttggacagctccactaaggccaatgatgacctgaagcaagccaattccaacctcacg
tccttgctggaggaattaaaacagaagatagaaaaggtggaggctgagggagcttccttg
aaaaaagaaaaggttgatctacaggcacagcttcagaagctttgctcagagagggaggcc
cttgaaaaaagcaaaactgaacttgcagaggtgcatcatgaactaaaaggcaactctgaa
cagatgcgtttggaactcattaagaagaacgataccctaacaaaaaagcaggatctcctg
ctttcgcagcagacggagctaaacaagagcctacagaaggacaaagaggatctgcttctg
caggtccaggagttcaaaggtcaaacgcaatcactttcaaaggcaaaaatgcttcttgaa
ttgcagcagcagactgaagcaagtgaccgaagtaaactgtcctctgcaaaggatgacctc
tccagagagagagaggacttacagacacagttgttcactctgacacaggagaagattact
ctcctgcagtctgaatccagcctgaaggcagaggttgcctctgtttgtgttgaaagagac
acaatggcctctgagagaaatagtttgcgtagtgatttagggcaacttaagacgacccac
actggcttgttaggtgagagacggggtcttcttgaggagaatgtccagatgcaagtcaaa
gtgcaggacctcactcaacaatctgttaccagagagaaggccatggatgagttgtctgcc
aaccttaaggatattggagtggagagaaaagccttggctggggaggttgagaacttaaag
gcacagctgaaggagagggaccaggaaaagggtgacttggctggagaccaaatatgcctg
tctgccaagctggagaagcttgtcaacgaggtctcctccctggctaaggagaaggtagac
ctcctagctgtacagtcccgcctggagcaagacctttcctccctccacagcagccaagag
agtagggatggggaacactcaaggatcatgggggaggtagagaagctgcaagttacccag
acacagcttgaagcagatgcccagaccctacgtgctgagaagtcagtgatggagggacag
cacaaagcctctgtgaaggaggcatctgtatcttccaaggtcagagaagaaatggccacc
aacctggaagacctgaaggtccagaaggatgccttgctcaaggagaggaacaaagctacc
cagcaggtcacccagcttgaggctcaactaaaaaatgctatttccaagcagcttgaggca
gcggagtcctcagggaagactgctgaggtcgtggagttgctgacacaagagaagggcctt
ctgcagcaggagaagattgaggcccagtctctgctggaggagttcaggcgtgccaagcag
gagatgaccaatcagctggattccttgaagcaacagaattccaaatacaaaaaggagctc
aacctttctaaagagcaactcagctcagagaaccagaaaatcagcggcctgtgccaggag
attaataacctgaagcaggctacctctgtgaagtcccagtccctggtggccttacaggag
gagaacaacaagctgaccaaggagcttggcagcagcaagaaggagaccagtggccagcag
aagctggaagctcagcagtccaagctcaataaacagttgcaagaaatgaagcagagagag
aacacaatgaagaaaaagttagatgaggagaaagccttcctccagaaatccatccataaa
agcagcgccttgatctctgagaaggatcaggagctggagaccctgatgagtgagttatca
gtgctgcgtggggagagcgccatagcgaagacactgaagtttactatccagttactggag
aaggacaaggcacagctgcaggagcatgttcagagcctggagaagagtctttcaggagga
caggaaactgttaccagctcctcaggtgacacagctctggatcaactaagggagaacaag
gagactgcagaaagccaggcagcgattgagttcctgaactcggttatcgtggacctgcag
aagaagaatgaggaacttaagggcaagctggagaagatggcagaggctgccctcaatggg
aataatgcaagcgagcttgacaactatgacggcagttttaacaaaggcccctccaaaaag
aaggtcccaccaaggctcttctgtgacatttgtgactgcttcgacctccatgatacagaa
gactgtcccactcagatgcagatgccggactccccaccccacaccacctaccacggcagt
aaggatgaggagagggcttattgtgacatctgtgaggcctttggccactggactgactcc
tgtaacgatgaccagaccttctaa
DBGET
integrated database retrieval system
