Oncorhynchus keta (chum salmon): 118358375
Help
Entry
118358375 CDS
T09424
Name
(RefSeq) vacuolar protein sorting-associated protein 35-like isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118358375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118358375
Membrane trafficking [BR:
oke04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
118358375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
FerA
Motif
Other DBs
NCBI-GeneID:
118358375
NCBI-ProteinID:
XP_052336259
LinkDB
All DBs
Position
2:62487160..62501360
Genome browser
AA seq
798 aa
AA seq
DB search
MPTTQQSPQDEQEKLLDEAVQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVR
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDDGEQLEGEDAMTGDIND
SIDFVLLNFAEMNKLWVRMQHQGHSRDREKREKERQELRILVGTNLVRLSQLEGVNVEKY
KQIVLSGVLEQVVNCRDSLAQEYLMECIIQVFPDEFHLQTLNLFLRSCADLHQHVNVKNI
IIALIDRLALFAHREDGPGIPAEIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLA
MKCYPDRVDYVDKVLESTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYSNILTVLQL
KHFPPLFEYFDYESRKSMSCYVLSNTLDYNTTIIAQEQVDAILTLVSTLIQDQPDQPAED
PDPEDFAEEQSLVGRFIHLLLSDDPDQQYLILNTARKHFGAGGNQRIRYTLPPLVFAAYQ
LAFRYKENSSSDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFEN
HETVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERTKCFSEENHEPLRTQCALAAS
KLLKKPDQCRAVSICAHLFWSGRNTEKNGEEIRDGKRVMECLKKALKIANQCMDPSLQVQ
LFIEILNRYVCFYERENDAVTVQVLNQLIQKIREDLPNLEASEETEQINKHFHNTLEHLR
LQRESPEAEGPAYEGLVL
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgcctaccacacagcagtcaccccaggacgagcaggaaaagctacttgatgaagccgtg
caggctgtcaaggtccagtcatttcagatgaaacgttgcctggacaagaacaagctgatg
gatgcattgaaacatgcatctaacatgctgggtgaactcaggacctccatgttatcgcca
aagagctactatgaactctacatggccatctctgacgagctccactacctggaggtgtac
ctgacagatgagtttgccaagggcaggaaggtggctgacctctatgagctggttcaatat
gcagggaacatcatccccagactttacctgctgatcactgtgggggtggtgtatgttcgc
tccttccctcagtcgcgtaaggacatcctgaaggacctggtggagatgtgtcgtggggtg
cagcacccgctgagaggcctgttcctcagaaactacctgctgcagtgcacccgcaacatc
ctgcctgatgatggggagcagctagaaggggaggatgcgatgacgggagacattaacgac
tccattgactttgtgctgctgaattttgctgagatgaataagctgtgggtgcgcatgcag
caccagggccacagccgagacagggagaagagggagaaggagaggcaggagctgcgcatc
ctggtcgggaccaacctggttcgactcagccagctggagggggtcaacgtggaaaagtat
aaacagattgtgctgtccggtgtcctagagcaggtagtaaactgcagagattccctggct
caagaatatctcatggagtgcatcattcaggtcttccctgatgagttccaccttcagaca
ctgaacctattccttcgttcctgtgccgacctgcatcagcacgtcaatgtcaaaaacatc
atcatcgctctcattgacagactggctttgtttgctcaccgagaagatggacctggaatc
cctgctgaaatcaaactgtttgatattttctcccaacaagtagccacagttatacagtcc
cgccaggacatgccttcggaggatgtggtctcattacaggtgtccctcatcaacctggca
atgaagtgctaccctgaccgggtggactatgtggacaaggtgttggagagcacagtggag
atcttcaacaagctcaacctggaacacattgcaaccagtagcgcggtctcaaaagaattg
actagattgctgaagatcccagtggacacctacagcaacattctgactgttctgcagctc
aagcacttccctccactcttcgagtactttgattatgagtcccgcaaaagcatgagctgt
tacgttctgagcaacactctggactacaacaccaccattatagcccaggagcaggtggat
gccatcttgaccctggtgtcgacactgatccaggaccagccagaccagcccgctgaagac
cccgacccagaggactttgctgaggagcagagccttgtgggtcgctttatccatctgctg
ctttccgatgaccccgaccaacagtatctgatcctgaatacagccaggaagcactttggt
gctggggggaaccagaggattcgctacactcttccaccgctggtgtttgctgcctatcag
ctggccttccgctacaaagagaactcttcatcagatgataaatgggagaagaagtgccag
aagatcttctcatttgcccaccaaaccatcagtgctctgatcaaggctgagctggctgag
ctgcccctcagactcttcctacagggggcgctggccgcaggagagattggcttcgagaac
cacgagactgtggcctacgagttcatgtcacaggccttctccctgtatgaggatgagatc
agcgactccaaggctcagctagcagccatcacgctgatcatcggcacgtttgagagaacg
aaatgcttcagcgaggagaaccacgaaccgctgaggacacagtgtgcactcgccgcctcc
aaactgctcaagaagccagaccagtgtcgggccgtcagcatctgtgcacacctcttctgg
tccggacgcaacactgaaaagaatggagaggagattcgtgacgggaagagggtgatggag
tgtttaaagaaggccctgaaaatcgccaaccagtgcatggacccgtcattgcaagtgcag
ctcttcattgagatcctgaaccgatacgtctgtttctacgaaagagagaatgatgcggtg
acggtccaggttctgaaccagctgatccagaagatccgagaggacctaccaaacctggag
gccagcgaggagacggagcagatcaacaaacacttccacaacacactggagcacctgcgt
ctgcagagagagtcgccggaggccgagggacctgcttatgagggcctggtgctgtag
DBGET
integrated database retrieval system
