Oncorhynchus keta (chum salmon): 118358414
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Entry
118358414 CDS
T09424
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30-like isoform X2
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
118358414
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oke01002
]
118358414
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118358414
04121 Ubiquitin system [BR:
oke04121
]
118358414
Enzymes [BR:
oke01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
118358414
Peptidases and inhibitors [BR:
oke01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
118358414
Membrane trafficking [BR:
oke04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
118358414
Ubiquitin system [BR:
oke04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
118358414
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUF5700
Motif
Other DBs
NCBI-GeneID:
118358414
NCBI-ProteinID:
XP_035592117
LinkDB
All DBs
Position
25:21837341..21854201
Genome browser
AA seq
514 aa
AA seq
DB search
MYKLQFYSESPFIMETKCNCKAGPGQCNHSFSLLNKIMKNWGVIGGIAAAMAAGVYVLWG
PITDSKKRKKGMVPGLLNLGNTCFMNSLLQGLAACPSFIKWLEEFTSRKGVPEGEPEKDP
KLSTTLLQLLQALSNNNTGEEDVLDAGCLLEVLRLYRWHISSFEEQDAHELFHVLTSSLE
EERDRQPKVTHLFDIQSLESLPDIDDKTLSCKSRGPLHPLRSPWKFPHPFHGRLTSNMAC
KRCEQQSPVRYDSFDSLSLSIPSPQWGWPISLDHCLQHFISSETIKEVECENCTKLQQGT
LVNGHVLESQRTTFIKQLKLGKLPQCLCIHLQRLTWSNEGTPIKRQEHVQISEYLSMDHY
KHRATIQRLQVINCTPKTIKAEDSGEAADKTPPIGKDIEHHNNNKPLSNGTCSSVFLHSP
GLNPQVNLTYDYSSSEYHFQLMAVLVHHGDMNSGHFVTYRRCPPSPHSPSPFSSQWLWVS
DDSVRKASLQEVLSSNAYLLFYERVRRLRLLLEE
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgtacaagctgcagttctactctgaaagtccattcatcatggagactaaatgcaactgc
aaagctggcccgggacagtgcaaccattccttcagtttactgaataaaattatgaaaaac
tggggagtcattggtggaatagcggctgccatggctgctggagtatatgttctatggggt
ccaattacagacagcaagaaaaggaagaaaggcatggtaccaggcctgctgaacctggga
aacacctgcttcatgaactctctgctccagggcctggcagcctgcccttccttcatcaag
tggctggaggagttcactagccgcaaaggtgtgccagagggcgagccagagaaggacccc
aaactttccacaacactcctgcagcttctccaagcactgtcaaacaacaacactggggag
gaggatgtgctggatgcagggtgtctgctggaggtcctcagactctacaggtggcacatc
agttcctttgaggaacaggatgcccatgagctcttccatgtcctcacctcttccttggag
gaggagcgagaccgacagcccaaagtcacccacctctttgacattcagtcccttgagagt
ctcccagatatagatgataagaccttaagctgcaagagtcgaggccctcttcatccttta
cgaagtccttggaagtttccacatcctttccatggccgcctaacaagcaatatggcttgc
aagcgttgcgaacaacagagtccagtgcgatatgactctttcgacagcctctccttatcc
atcccttcaccgcaatggggctggcctatctccttggatcactgtctccagcatttcatc
tcttcagagaccattaaagaggtggagtgtgaaaactgcaccaagcttcaacaaggcacc
ttggtgaatgggcatgtcctggaaagccagaggacaaccttcatcaaacagcttaaactg
ggaaagctcccacagtgtctctgtattcacctgcagagactgacatggtctaatgagggt
acgcccataaagagacaggaacatgtccagatctcagagtacctgtctatggaccactac
aaacaccgcgcaaccattcagaggctccaggtcatcaactgtactcccaaaaccattaaa
gcagaggattcaggagaagctgcagataagacccctcccattggcaaagatatagaacac
cataacaacaacaagcctctgtccaatggaacctgttcgtctgtctttctccattctcct
gggttgaacccacaggtcaacctcacatatgactacagctcctcagaataccactttcaa
ctgatggctgtgttggttcaccatggtgacatgaactcaggacactttgtcacttaccgc
cgctgccctccctcgccccacagcccctctccattcagctcccagtggctgtgggtttca
gatgactctgtacgcaaggccagtctgcaggaggtgctgtcctccaatgcctacctactc
ttttatgagcgggtgagacggctccgtctactgttggaggagtag
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