Oncorhynchus keta (chum salmon): 118358525
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Entry
118358525 CDS
T09424
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118358525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118358525
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
118358525
mRNA degradation factors
5'-3' decay
Lsm complex
118358525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
118358525
NCBI-ProteinID:
XP_035592351
LinkDB
All DBs
Position
25:complement(31983879..31987812)
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AA seq
133 aa
AA seq
DB search
MNYMPGTASLIDDIDKKHLVLLRDGRTLIGFLRSIDQFANLVFHQTVERIHVGKKFGDIP
RGIFIVRGENVVLLGEIDIDKLCDNVLQQVSIEEILEEQRLQQQAKQKTEKAKVTALKDR
GLSIPKADNLDEY
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaactacatgccagggaccgcgagtctcatcgatgacatagacaaaaagcatcttgta
cttcttcgagatggacgaacgctaattgggtttctgagaagcattgaccagtttgccaac
ctagtttttcatcaaacagtcgagcgcatccacgtgggcaagaagtttggagacatcccc
cggggaatcttcattgtgagaggagagaatgttgttttgcttggagaaatagacattgat
aagctgtgtgacaacgtcttgcagcaagtttctatagaggagatcctggaggagcagcga
ttgcaacagcaagccaagcagaagaccgagaaagccaaggtgaccgcactgaaggacaga
ggcctatccatcccaaaagcagataatctcgatgaatactga
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