Oncorhynchus keta (chum salmon): 118358615
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Entry
118358615 CDS
T09424
Name
(RefSeq) rho GTPase-activating protein SYDE2-like isoform X1
KO
K20655
Rho GTPase-activating protein SYDE
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118358615
Membrane trafficking [BR:
oke04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
118358615
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
C2
Motif
Other DBs
NCBI-GeneID:
118358615
NCBI-ProteinID:
XP_052336025
LinkDB
All DBs
Position
26:complement(3545428..3628294)
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AA seq
1818 aa
AA seq
DB search
MADPLRRTLLAKLRGKKSKNGTPVGGYGAAANGGREGKEKVSPNPNGHAHPVVMFAELHC
VADNIMRGNESYVNGIVENKVGSVWEQSTVGVVKTSVFPQQFEAPATMHRNTSRGPGDNQ
GNGGSGFRGRVNEELLGVSLQIATQYGGHDRYEMGRIPNGYFSKQVQQEQIGKPHEQRKH
FGPIPRQYGAGDSIGFGGSSPNYNIIYHRRPGVVDREGVKLTGGHYPASKSNGTNVCFDA
YLKTRVSDGQADSCHQTMYNYKAENAQRSIHYLKGKAKLNPGHNQILETNVTTNWMQMYP
LGVLCGHHPTGSYTEENIVIRDIESYRSSPEFTGDNIRVTHLQSPTFFPTELEICDANVA
SHFICAREGTLRNNSIDSEDDDYYDNEILPFYISESVGPSDRKGSDKVESIESGIDVPKG
HVISDSVQETDKLHSQLKEACYLLINAMRDISFDGQVSVNGFKDQKSMCSWSSFKHVGSD
ALSSGEYSAQQVSDMDSLPLCLLSENNTNLICKSLVNLSASRIRPPLLRSTSDGTIKHSK
GVHNGPCIQGLGSQSPLVVGACEDGDGANRPKAVGASDPFEKQTSYDGGTSSDGLLHDTG
DNGTLNESRGSVNSLTGSSDNAEPQQGGNNNQDREMSGWTLDQGGSAKPHGVTVSKMQEW
MHKGRLLSSEMKQRIAGSTPQPHGAHGGLDRAPRPRQGQVSSGPGGSKPEALTTRVDRAQ
AAAVVSCQGQESQKSALIENDHSSFSNALDVGGGKAVETSLWRPPLNTITVSKKRNWLQQ
SSGRPCHATDEPQYLLGAEEYNGHGKAPLSPLSPSPENLNPPGPTLSHPFHLHLPLVRMG
HACVAPRSRCVEPTEENDADDEGEIWYNPIPEDEEPELHHSHSHRPTPTPQVRLMVQTQP
HDPHVHQTQRRPSRGEEVGVLRALEGCSPNLEGVGESMGGGGGERSQQGIAMRCMGPSLH
LQRQMLPACKPQEWPTLSSRATATAEAPDLAIPDFAPPSGLNPAKKGSSLNWSFPDRIKS
PRTVRKLSMKMKKLPELSRKLSVKGTPSNNNNSSCNGASESSILKTRTQCPKNNYGSEPG
PAPPRLSPRGGQGAVASHNVISRYHLDSSVSTQQSYSKKKKSSGTSKSASKGGYLSDGDS
PELVTKSGKHGSSEAKGGKGKEKDPATGGGERTGAGGVTGGSGNPRLHGTELDIDAFRHY
AFTEQPKCTQYISGLMSLHFYGAEDLKPPRFDSRDVYCAIQVDSVNKARTALLTCRTTFL
DMDHTFNIELENAQHLKLVVFSWDPTPKKNRVCCYGTVVLPALFRVTRSHQLAVKLEPRG
LIYVKLNLMEQWQNSLDGGYNGDREPQMFGVEAWRVVVRENTGLMLPLLIEKCITEIETR
GCQVVGLYRLCGSAAVKKELREAFERDSLGVELCENTYPDINVITGVLKDYLRELPYPLI
TKHLYETVLDSMAQRPLRIGAGGCENDPADTEHTVSLLENLPEVERFTLRRLLDHLKLVA
SYHEVNKMTCQNLAVCFGPVLLSQRQEASCHSNRVFIDSEELASALHFKKHIEVLHYLLQ
LWPVMDPRDKTSSPIPGPPGSADQLAVPPLRRRKERPQVLTLSDSEMAGVLRPRPGRLDS
PSNRYAGDWSRCGQSYFPPPRSRGENDYADVPSEDMEVTEEELEGVEDKGQEGGEEQRQE
WLLDRGQAEPATAEQEPPLPKEVMKGPVEVEKVEREAEEREAEEREAERRVEERDGSSGG
QPSDNRVCDDDDEDDDGDKRILPLHLPKEHTYQAYMKIQDICPVLSNKVNLRDLQESIDT
LIGNLERELNKNKLNVGY
NT seq
5457 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcctctgcggaggactttactagcaaaacttcgggggaagaaatccaagaat
gggacaccggttggtggatacggagctgcagctaatgggggcagagaaggtaaagaaaaa
gtttctccaaacccaaacggacatgctcatccagtagtaatgttcgcagagttgcattgt
gtggcagacaatatcatgagaggcaacgagagttatgtgaatgggattgtagaaaacaag
gttggatcagtttgggagcagagcacggtaggagttgttaagactagtgtgtttccccag
cagttcgaggccccagctaccatgcacagaaacactagccgggggccgggagacaatcag
ggcaacggaggctcggggtttaggggtcgagttaatgaagaactcttgggggtctcactt
caaatagcaacgcagtacggggggcacgataggtacgagatgggcagaatccctaacggc
tacttttcgaaacaagtacaacaagaacagatcgggaaaccgcacgaacagagaaaacac
tttggccccattccgcgacagtacggcgcaggggactccatcgggttcggtggcagtagt
cctaattataacattatataccacagacggcctggtgttgtagatcgagagggagttaag
ctgacaggtggccactatcctgcttcaaagagtaatgggacaaatgtctgctttgacgca
tatctaaagactcgagtcagcgacgggcaggcagactcctgccatcaaactatgtacaac
tacaaggcagagaacgcgcagaggtcaatacattatttaaaaggcaaggcaaaattgaat
cctggccacaaccaaatattggaaaccaacgttacaactaactggatgcaaatgtatccg
ctgggtgtcctatgtggacatcatccgaccggtagttacacggaggaaaacattgttatt
agagacatcgagagctaccggagctcgcccgaatttaccggggacaacattagggtgaca
catttgcagagccccacattcttccccactgaattggagatatgcgacgcaaacgtggct
tcccatttcatatgcgctagagagggaacactccgaaacaactctatagatagcgaggat
gacgattattatgataacgaaattctccccttttacatatcggagtcagtaggaccaagt
gacagaaagggctctgataaagtagagagcatagagtcgggaatagatgttccaaaagga
catgtcatcagtgacagtgtgcaggagacagacaaactacatagccagttgaaagaggcg
tgttacctgcttataaacgccatgcgcgatattagttttgatggtcaggtcagtgtcaat
ggatttaaagatcagaagagcatgtgctcgtggtcatccttcaagcacgtgggcagtgat
gctttgtcatctggagagtacagtgcccaacaggtgtctgacatggactcgctcccattg
tgcctgctgagtgaaaataacactaatttaatttgcaagagccttgtaaacctatctgct
agcaggattaggccccccttactgcgatccactagtgacggaactatcaaacactccaag
ggcgtgcacaatgggccctgtatccagggcctcggttcccaaagccctttggttgttggg
gcctgtgaagatggggatggagcaaataggccgaaggctgttggagcctctgacccattt
gagaaacagactagctacgatggtggcacgagcagcgacggcctgctccatgacaccggt
gacaatggcacgttaaatgagagtagaggctcggtcaacagccttaccgggtcatccgac
aatgcagaaccccagcagggtggtaacaacaatcaggacagagagatgagcggttggact
ctggaccagggaggctctgccaagccccacggtgtcaccgtcagcaagatgcaggagtgg
atgcacaaaggccgcctactgtcatctgagatgaagcagcgcatcgcagggtccacgccc
caaccccatggtgctcatggtggcctggatagggcaccacggcccagacagggccaggtc
agctcagggccaggtggttctaaaccagaagccctgacgaccagagttgacagggctcaa
gcagccgcagtggtctcatgccagggccaggaatcacagaagtcagctctgatagaaaat
gaccactcctccttctccaacgcccttgatgtgggcgggggcaaggctgtcgagacgtcg
ctatggagacccccgctcaacaccatcaccgtctccaagaaacgtaactggctccagcag
agctctgggaggccgtgtcacgccacagacgaaccccagtaccttctgggagcagaggaa
tacaatggacacggaaaagctccactctcccctcttagcccctccccagagaacctaaac
cctcccgggccaaccctatcccacccattccacctacacctgcccctcgttagaatgggc
cacgcctgtgtggcgcctcgttccaggtgtgtggaaccgactgaggagaatgatgcggac
gatgagggggagatctggtacaaccccatccccgaggatgaggaaccagagctgcaccac
agccacagccacagacccactcccaccccccaggtcaggctgatggtccagacacagccc
cacgatcctcacgtccaccagacccagaggaggcccagcaggggagaggaggttggggtc
ctgcgggccctggagggatgcagccctaacctggagggtgtgggggagagcatgggtggc
ggaggtggagagcggagtcagcaggggattgccatgcgttgcatggggccgtctctacat
ctgcaaaggcagatgctgcccgcgtgcaaacctcaggagtggccaaccctttccagcaga
gccacggctacagcagaagcccctgacctggccatccctgacttcgcgccgccctcaggc
ctcaaccctgccaaaaagggaagctccctcaactggtcattcccggacaggatcaagtct
ccacgcactgtcaggaaactctccatgaaaatgaagaagcttccagaactcagccgcaag
ctcagcgtaaaagggacccctagcaacaacaacaacagcagctgcaacggagccagcgag
agcagcatcttaaagacaaggacacagtgtcccaaaaacaattacgggtcagaaccaggc
ccagctcctcccaggttgtccccaaggggtgggcagggggcggtggctagccataatgtg
atctcgaggtatcacctggacagcagtgtgtcgacgcaacaaagctacagcaagaagaag
aagagcagcgggacctccaagtcggctagcaaggggggctacctcagtgacggggactcc
ccagaactggtgaccaagtctgggaagcacgggtcctcagaggccaagggaggcaagggg
aaggagaaagacccagccactggaggaggagagagaacaggagcaggaggagtaacggga
ggaagtggcaaccccaggctgcacggcacagaactagacattgacgcgttccgccactac
gccttcacagaacagcccaagtgcacccaatacatctcgggcctgatgagcctgcacttc
tacggcgccgaggacctcaagccaccacgcttcgactcccgagacgtctactgtgccatc
caggtggactcggtcaacaaggcgcgcactgccctgctcacctgtcggaccaccttccta
gacatggaccacaccttcaacattgagctggagaacgcccagcacctgaaactagtggtg
ttcagctgggaccccacacccaagaagaaccgggtgtgctgttacggcacagtggtgtta
ccggcactcttcagggtgaccaggagtcatcagctggcggtgaagctggagcctcgaggc
ctgatctacgtgaagctgaacctgatggagcagtggcagaactccctggatggaggctac
aatggggaccgggagccacagatgtttggggtggaggcctggagggtggttgtgagggaa
aacacaggactcatgctgcccctgctcatcgagaagtgcatcacggagatcgagacgaga
ggctgccaggttgtgggcctctaccgtctgtgtggctcagcagcagtaaagaaggagctg
cgggaggccttcgagagggacagcctaggagtggagctctgtgaaaacacctaccctgac
atcaacgtcatcacgggtgttctgaaggactacctgcgtgagttgccctacccccttatc
actaagcacttgtatgagactgtgttggactctatggctcagagacctctgcgtatcgga
gcaggaggatgtgaaaatgacccggcagacacagagcacaccgtcagtctcctggagaac
ctgccagaggtggagaggttcaccctgcggaggctgctggaccatctgaagctggtggcg
tcataccacgaggtcaacaagatgacgtgtcagaacctggcggtatgcttcggccccgtg
ctgctcagccaacgccaggaggccagctgtcatagcaaccgggtcttcatcgactcggag
gagctggccagcgccctacacttcaagaaacatatcgaagtgctacactacctgctgcag
ctatggccagtgatggacccacgtgacaagacctcgtcccccatcccagggccccccggc
tcagcagaccagctggccgttccccccctgcgtcggaggaaggagcgcccccaggtgctg
accttgagcgattcagagatggccggggtgctgcggcccaggccgggccgtctggacagc
cctagcaaccgttacgccggggattggagccgctgtggacagagctacttccctcctcct
cggtcccggggggaaaatgactatgctgatgttccttctgaggatatggaggtcactgag
gaggaactagagggggtagaggacaagggacaggaaggaggagaggagcagagacaggaa
tggttactggacaggggacaggcagagccagccacagccgaacaggagcccccgttaccc
aaggaggtgatgaaaggacctgtagaagtggagaaagttgagagggaagcagaggagagg
gaagcagaggagagggaagcagagaggagagtggaggagcgtgatggctccagtggtggt
cagccgtcagacaacagggtgtgtgatgacgatgatgaggatgatgatggtgataagcgc
atcctgcccctccacctccccaaagagcacacgtaccaggcctacatgaagatccaggac
atctgccccgtgctcagcaacaaggtcaacctgcgagacctgcaggagagcatcgacacg
cttataggcaacctggagagagaactcaacaagaacaagctcaacgtcggctactga
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integrated database retrieval system
